Gene annotation
Transcriptome id Sobic.002G063700.2,Sobic.002G063700.5,Sobic.002G063700.4,Sobic.002G063700.3
Synonym Sb02g005320, RPS3, RPM1
Functional annotation NB-ARC domain containing protein, expressed
UniProt C5XBW6
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF576
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G07040 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os11g46210.1 : NB-ARC domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium KQK12047 , KQJ87184 , KQJ87182 , KQJ87183
Barley HORVU3Hr1G002150.1 , HORVU3Hr1G002150.3 , HORVU3Hr1G002150.2 , HORVU3Hr1G002150.5 , HORVU3Hr1G002150.4 , HORVU3Hr1G002150.7 , HORVU3Hr1G002150.6 , HORVU3Hr1G002150.9 , HORVU3Hr1G002150.8 , HORVU3Hr1G002150.11 , HORVU3Hr1G002150.10 , HORVU3Hr1G002150.13 , HORVU3Hr1G002150.12
Wheat TraesCS4A02G487300 , TraesCS4A02G487300 , TraesCS7D02G007000 , TraesCS4A02G487500 , TraesCS5B02G540300 , TraesCS7D02G004800 , TraesCS7A02G006200 , TraesCS7A02G004400 , TraesCS4A02G490900 , TraesCS4A02G493300 , TraesCS7D02G007600 , TraesCS5D02G548500 , TraesCS7D02G006700 , TraesCS7A02G007900 , TraesCS4A02G488400 , TraesCS4A02G490800 , TraesCS4A02G494100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G055300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
2 Sobic.001G153100 sulfate transporter, putative, expressed K17470: sulfate transporter 1, high-affinity
3 Sobic.001G415100 terpene synthase, putative, expressed -
4 Sobic.005G069332 - -
5 Sobic.009G136800 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
6 Sobic.005G069166 - -
7 Sobic.006G230100 TKL_IRAK_DUF26-ld.1 - DUF26 kinases have homology to DUF26 containing loci, expressed -
8 Sobic.006G230200 TKL_IRAK_DUF26-ld.1 - DUF26 kinases have homology to DUF26 containing loci, expressed -
9 Sobic.010G128300 peroxidase precursor, putative, expressed K00430: peroxidase
10 Sobic.002G391300 peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.002G289500 carbohydrate binding protein, putative, expressed -
12 Sobic.002G392000 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.008G105800 cytochrome P450, putative, expressed -
14 Sobic.004G299500 - -
15 Sobic.010G010000 plant protein of unknown function domain containing protein, expressed -
16 Sobic.003G441601 - -
17 Sobic.007G202480 - -
18 Sobic.006G171100 expansin precursor, putative, expressed -
19 Sobic.001G348400 expressed protein -
20 Sobic.005G226400 RGH1A, putative, expressed -


Gene co-expression network
sample Sobic002G063700 Sobic002G063700 Sobic009G055300 Sobic009G055300 Sobic002G063700--Sobic009G055300 Sobic001G153100 Sobic001G153100 Sobic002G063700--Sobic001G153100 Sobic001G415100 Sobic001G415100 Sobic002G063700--Sobic001G415100 Sobic005G069332 Sobic005G069332 Sobic002G063700--Sobic005G069332 Sobic009G136800 Sobic009G136800 Sobic002G063700--Sobic009G136800 Sobic005G069166 Sobic005G069166 Sobic002G063700--Sobic005G069166 Sobic006G230100 Sobic006G230100 Sobic002G063700--Sobic006G230100 Sobic006G230200 Sobic006G230200 Sobic002G063700--Sobic006G230200 Sobic010G128300 Sobic010G128300 Sobic002G063700--Sobic010G128300 Sobic009G055300--Sobic006G230200 Sobic009G055300--Sobic006G230100 Sobic008G105800 Sobic008G105800 Sobic009G055300--Sobic008G105800 Sobic009G055300--Sobic002G063700 Sobic009G055300--Sobic001G415100 Sobic007G202480 Sobic007G202480 Sobic009G055300--Sobic007G202480 Sobic004G299500 Sobic004G299500 Sobic009G055300--Sobic004G299500 Sobic009G055300--Sobic005G069332 Sobic009G055300--Sobic005G069166 Sobic001G153100--Sobic007G202480 Sobic001G153100--Sobic005G069166 Sobic001G153100--Sobic006G230100 Sobic001G153100--Sobic004G299500 Sobic006G229901 Sobic006G229901 Sobic001G153100--Sobic006G229901 Sobic001G153100--Sobic002G063700 Sobic001G395900 Sobic001G395900 Sobic001G153100--Sobic001G395900 Sobic001G153100--Sobic001G415100 Sobic002G289500 Sobic002G289500 Sobic001G153100--Sobic002G289500 Sobic007G015000 Sobic007G015000 Sobic001G415100--Sobic007G015000 Sobic001G415100--Sobic002G289500 Sobic001G415100--Sobic006G230100 Sobic001G415100--Sobic009G055300 Sobic001G415100--Sobic002G063700 Sobic001G415100--Sobic004G299500 Sobic005G182900 Sobic005G182900 Sobic001G415100--Sobic005G182900 Sobic001G415100--Sobic001G153100 Sobic005G097900 Sobic005G097900 Sobic001G415100--Sobic005G097900 Sobic005G069332--Sobic005G069166 Sobic005G069332--Sobic004G299500 Sobic005G069332--Sobic008G105800 Sobic005G069332--Sobic006G230100 Sobic005G069332--Sobic007G202480 Sobic005G069332--Sobic002G063700 Sobic005G069332--Sobic009G055300 Sobic005G069332--Sobic001G395900 Sobic005G069332--Sobic006G230200 Sobic006G171100 Sobic006G171100 Sobic009G136800--Sobic006G171100 Sobic002G391300 Sobic002G391300 Sobic009G136800--Sobic002G391300 Sobic005G226400 Sobic005G226400 Sobic009G136800--Sobic005G226400 Sobic010G010000 Sobic010G010000 Sobic009G136800--Sobic010G010000 Sobic009G136800--Sobic002G063700 Sobic009G136800--Sobic010G128300 Sobic006G047200 Sobic006G047200 Sobic009G136800--Sobic006G047200 Sobic002G392000 Sobic002G392000 Sobic009G136800--Sobic002G392000 Sobic009G136800--Sobic002G289500 Sobic005G069166--Sobic004G299500 Sobic005G069166--Sobic005G069332 Sobic005G069166--Sobic006G230100 Sobic005G069166--Sobic007G202480 Sobic005G069166--Sobic001G153100 Sobic005G069166--Sobic006G229901 Sobic005G069166--Sobic008G105800 Sobic005G069166--Sobic001G395900 Sobic005G069166--Sobic007G015000 Sobic006G230100--Sobic004G299500 Sobic006G230100--Sobic001G395900 Sobic006G230100--Sobic007G202480 Sobic006G230100--Sobic007G015000 Sobic006G230100--Sobic005G069166 Sobic006G230100--Sobic009G055300 Sobic006G230100--Sobic006G230200 Sobic006G230100--Sobic001G153100 Sobic006G230100--Sobic006G229901 Sobic006G230200--Sobic009G055300 Sobic006G230200--Sobic001G395900 Sobic006G230200--Sobic006G230100 Sobic006G230200--Sobic007G202480 Sobic006G230200--Sobic004G299500 Sobic006G230200--Sobic005G069332 Sobic006G230200--Sobic008G105800 Sobic006G230200--Sobic001G153100 Sobic006G230200--Sobic005G069166 Sobic010G128300--Sobic002G392000 Sobic010G241900 Sobic010G241900 Sobic010G128300--Sobic010G241900 Sobic010G191700 Sobic010G191700 Sobic010G128300--Sobic010G191700 Sobic010G128300--Sobic002G391300 Sobic010G128300--Sobic005G226400 Sobic005G226350 Sobic005G226350 Sobic010G128300--Sobic005G226350 Sobic005G134200 Sobic005G134200 Sobic010G128300--Sobic005G134200 Sobic010G128300--Sobic009G136800 Sobic007G220400 Sobic007G220400 Sobic010G128300--Sobic007G220400
Octagon: transcription factors


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