Gene annotation
| Transcriptome id | Sobic.009G136800.1 |
|---|---|
| Synonym | Sb09g020290 |
| Functional annotation | peptide transporter PTR2, putative, expressed |
| UniProt | A0A1Z5R3Q9 |
| Pfam | PF00854 |
| Panther DB | PTHR11654 PTHR11654:SF168 |
| NCBI CDD | - |
| KEGG Orthology | K14638; SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4 |
| Gene Ontology | GO:0016020; membrane GO:0006810transport GO:0005215transporter activity |
Orthologs (automatic annotation)
| TAIR | AT1G68570 : Major facilitator superfamily protein |
|---|---|
| RAP-DB (Rice) | LOC_Os05g33960.1 : peptide transporter PTR2, putative, expressed |
| MaizeGDB (Corn) | Zm00025a043684 , Zm00025a043686 , Zm00025a043687 , Zm00025a043685 |
| Brachypodium | KQK06278 , KQK06279 , KQK06271 , KQK06277 |
| Barley | HORVU1Hr1G063470.11 , HORVU1Hr1G063470.10 , HORVU1Hr1G063470.13 , HORVU1Hr1G063470.12 , HORVU1Hr1G063460.2 , HORVU1Hr1G063460.3 , HORVU1Hr1G063460.1 , HORVU1Hr1G063420.6 , HORVU1Hr1G063420.7 , HORVU1Hr1G063420.4 , HORVU1Hr1G063420.5 , HORVU1Hr1G063420.2 , HORVU1Hr1G063420.3 , HORVU1Hr1G063420.1 , HORVU1Hr1G063470.1 , HORVU1Hr1G063470.3 , HORVU1Hr1G063470.2 , HORVU1Hr1G063470.5 , HORVU1Hr1G063470.4 , HORVU1Hr1G063470.6 , HORVU1Hr1G063470.9 , HORVU1Hr1G063470.8 |
| Wheat | TraesCS1A02G257800 , TraesCS1A02G257900 , TraesCS1B02G267900 , TraesCS1D02G256700 , TraesCS7D02G209200 , TraesCS1D02G257200 , TraesCS1B02G268300 , TraesCS1D02G257100 , TraesCS1B02G268200 , TraesCS1A02G257400 , TraesCS7A02G206400 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
 |
Find similar expressed genes
 |
| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.006G171100 | expansin precursor, putative, expressed | - |
| 2 | Sobic.002G391300 | peroxidase precursor, putative, expressed | K00430: peroxidase |
| 3 | Sobic.005G226400 | RGH1A, putative, expressed | - |
| 4 | Sobic.010G010000 | plant protein of unknown function domain containing protein, expressed | - |
| 5 | Sobic.002G063700 | NB-ARC domain containing protein, expressed | - |
| 6 | Sobic.010G128300 | peroxidase precursor, putative, expressed | K00430: peroxidase |
| 7 | Sobic.006G047200 | helix-loop-helix DNA-binding domain containing protein, expressed | - |
| 8 | Sobic.002G392000 | peroxidase precursor, putative, expressed | K00430: peroxidase |
| 9 | Sobic.002G289500 | carbohydrate binding protein, putative, expressed | - |
| 10 | Sobic.003G441601 | - | - |
| 11 | Sobic.002G111900 | receptor-like kinase, putative, expressed | - |
| 12 | Sobic.001G153100 | sulfate transporter, putative, expressed | K17470: sulfate transporter 1, high-affinity |
| 13 | Sobic.005G046400 | - | - |
| 14 | Sobic.005G134200 | "domain confirmed by Pfam database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsGH3.13 - Probable indole-3-acetic acid-amido synthetase, expressed | K14487: auxin responsive GH3 gene family |
| 15 | Sobic.010G241900 | Leucine-rich receptor-like protein kinase family protein(PubMedID : 28640841)@serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed | - |
| 16 | Sobic.005G205400 | - | - |
| 17 | Sobic.006G230100 | TKL_IRAK_DUF26-ld.1 - DUF26 kinases have homology to DUF26 containing loci, expressed | - |
| 18 | Sobic.009G055300 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxidase precursor, putative, expressed | K00430: peroxidase |
| 19 | Sobic.005G035900 | PAN domain-containing protein At5g03700 precursor, putative, expressed | - |
| 20 | Sobic.010G191700 | cytochrome P450, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
© 2015- RIKEN, All rights reserved.
