Gene annotation
Transcriptome id Sobic.009G165100.1
Synonym Sb09g022710
Functional annotation glycine-rich cell wall structural protein 2 precursor, putative, expressed
UniProt C5YZB1
Pfam -
Panther DB PTHR33548 PTHR33548:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os10g31640.1 : glycine-rich cell wall structural protein 2 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a012779 , Zm00025a012777 , Zm00025a012766 , Zm00025a012769 , Zm00025a043908
Brachypodium -
Barley HORVU0Hr1G007260.1 , HORVU0Hr1G007240.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G014600 disease resistance protein RGA2, putative, expressed -
2 Sobic.003G441601 - -
3 Sobic.002G019000 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
4 Sobic.002G391300 peroxidase precursor, putative, expressed K00430: peroxidase
5 Sobic.005G065700 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
6 Sobic.005G182900 NBS-LRR disease resistance protein, putative, expressed -
7 Sobic.010G213600 histidine kinase, putative, expressed -
8 Sobic.002G111900 receptor-like kinase, putative, expressed -
9 Sobic.002G289500 carbohydrate binding protein, putative, expressed -
10 Sobic.010G010000 plant protein of unknown function domain containing protein, expressed -
11 Sobic.006G171100 expansin precursor, putative, expressed -
12 Sobic.009G136800 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
13 Sobic.003G079100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@muconate cycloisomerase, putative, expressed -
14 Sobic.008G033100 protein kinase domain containing protein, expressed K17302: COPB2, coatomer subunit beta'
15 Sobic.001G274400 serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
16 Sobic.005G046400 - -
17 Sobic.001G342000 expressed protein -
18 Sobic.006G031100 CAP (Cysteine-rich secretory proteins("PubMedID : 26759170,PubMedID : 24597475")@SCP-like extracellular protein, expressed -
19 Sobic.005G134200 "domain confirmed by Pfam database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsGH3.13 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
20 Sobic.001G272800 NBS-LRR disease resistance protein, putative, expressed -


Gene co-expression network
sample Sobic009G165100 Sobic009G165100 Sobic004G014600 Sobic004G014600 Sobic009G165100--Sobic004G014600 Sobic003G441601 Sobic003G441601 Sobic009G165100--Sobic003G441601 Sobic002G019000 Sobic002G019000 Sobic009G165100--Sobic002G019000 Sobic002G391300 Sobic002G391300 Sobic009G165100--Sobic002G391300 Sobic005G065700 Sobic005G065700 Sobic009G165100--Sobic005G065700 Sobic005G182900 Sobic005G182900 Sobic009G165100--Sobic005G182900 Sobic010G213600 Sobic010G213600 Sobic009G165100--Sobic010G213600 Sobic002G111900 Sobic002G111900 Sobic009G165100--Sobic002G111900 Sobic002G289500 Sobic002G289500 Sobic009G165100--Sobic002G289500 Sobic004G014600--Sobic003G441601 Sobic007G090600 Sobic007G090600 Sobic004G014600--Sobic007G090600 Sobic004G014600--Sobic009G165100 Sobic005G182800 Sobic005G182800 Sobic004G014600--Sobic005G182800 Sobic003G079100 Sobic003G079100 Sobic004G014600--Sobic003G079100 Sobic004G014600--Sobic010G213600 Sobic004G014600--Sobic005G182900 Sobic006G031100 Sobic006G031100 Sobic004G014600--Sobic006G031100 Sobic004G014600--Sobic002G289500 Sobic003G441601--Sobic002G391300 Sobic005G046400 Sobic005G046400 Sobic003G441601--Sobic005G046400 Sobic003G441601--Sobic002G111900 Sobic006G171100 Sobic006G171100 Sobic003G441601--Sobic006G171100 Sobic010G010000 Sobic010G010000 Sobic003G441601--Sobic010G010000 Sobic003G441800 Sobic003G441800 Sobic003G441601--Sobic003G441800 Sobic003G441601--Sobic002G289500 Sobic010G191700 Sobic010G191700 Sobic003G441601--Sobic010G191700 Sobic003G441601--Sobic004G014600 Sobic002G019000--Sobic005G182900 Sobic002G019000--Sobic005G065700 Sobic008G033100 Sobic008G033100 Sobic002G019000--Sobic008G033100 Sobic002G019000--Sobic010G213600 Sobic002G019000--Sobic009G165100 Sobic010G242800 Sobic010G242800 Sobic002G019000--Sobic010G242800 Sobic002G029500 Sobic002G029500 Sobic002G019000--Sobic002G029500 Sobic007G064900 Sobic007G064900 Sobic002G019000--Sobic007G064900 Sobic003G161400 Sobic003G161400 Sobic002G019000--Sobic003G161400 Sobic002G391300--Sobic003G441601 Sobic002G391300--Sobic002G111900 Sobic002G391300--Sobic010G191700 Sobic010G241900 Sobic010G241900 Sobic002G391300--Sobic010G241900 Sobic002G391300--Sobic006G171100 Sobic010G128300 Sobic010G128300 Sobic002G391300--Sobic010G128300 Sobic005G134200 Sobic005G134200 Sobic002G391300--Sobic005G134200 Sobic002G391300--Sobic002G289500 Sobic009G136800 Sobic009G136800 Sobic002G391300--Sobic009G136800 Sobic005G065700--Sobic002G019000 Sobic005G071900 Sobic005G071900 Sobic005G065700--Sobic005G071900 Sobic005G065700--Sobic005G182900 Sobic005G066500 Sobic005G066500 Sobic005G065700--Sobic005G066500 Sobic005G110511 Sobic005G110511 Sobic005G065700--Sobic005G110511 Sobic005G065700--Sobic010G213600 Sobic005G065700--Sobic003G079100 Sobic005G065700--Sobic008G033100 Sobic005G065700--Sobic010G242800 Sobic005G182900--Sobic008G033100 Sobic005G182900--Sobic002G019000 Sobic005G182900--Sobic010G242800 Sobic005G182900--Sobic002G029500 Sobic001G415100 Sobic001G415100 Sobic005G182900--Sobic001G415100 Sobic005G182900--Sobic005G065700 Sobic005G182900--Sobic005G182800 Sobic005G182900--Sobic003G161400 Sobic001G293100 Sobic001G293100 Sobic005G182900--Sobic001G293100 Sobic010G213600--Sobic008G033100 Sobic010G213600--Sobic005G065700 Sobic010G213600--Sobic002G019000 Sobic010G213600--Sobic004G014600 Sobic010G213600--Sobic005G182900 Sobic010G213600--Sobic009G165100 Sobic010G213600--Sobic003G079100 Sobic010G213600--Sobic003G161400 Sobic001G342000 Sobic001G342000 Sobic010G213600--Sobic001G342000 Sobic002G111900--Sobic010G191700 Sobic002G111900--Sobic002G391300 Sobic002G111900--Sobic003G441601 Sobic007G220400 Sobic007G220400 Sobic002G111900--Sobic007G220400 Sobic002G111900--Sobic010G241900 Sobic002G111900--Sobic010G010000 Sobic002G111900--Sobic006G171100 Sobic002G111900--Sobic005G046400 Sobic006G059800 Sobic006G059800 Sobic002G111900--Sobic006G059800 Sobic002G289500--Sobic002G391300 Sobic002G289500--Sobic001G415100 Sobic002G289500--Sobic003G441601 Sobic002G289500--Sobic006G171100 Sobic001G153100 Sobic001G153100 Sobic002G289500--Sobic001G153100 Sobic002G289500--Sobic009G136800 Sobic002G289500--Sobic002G029500 Sobic006G230100 Sobic006G230100 Sobic002G289500--Sobic006G230100 Sobic002G063700 Sobic002G063700 Sobic002G289500--Sobic002G063700
Octagon: transcription factors


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