Gene annotation
Transcriptome id Sobic.006G003600.1
Synonym Sb06g000520
Functional annotation transporter family protein, putative, expressed
UniProt C5YBA4
Pfam PF07690
Panther DB PTHR23500 PTHR23500:SF33
NCBI CDD KOG0254; Predicted transporter (major facilitator superfamily)
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT1G34580 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os04g37990.1 : transporter family protein, putative, expressed
MaizeGDB (Corn) Zm00025a011152
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G092700 MLO domain containing protein, putative, expressed K08472: mlo protein
2 Sobic.010G028100 GDP-mannose 4,6 dehydratase 2, putative, expressed K01711: gmd, GDPmannose 4,6-dehydratase
3 Sobic.010G082000 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
4 Sobic.008G164450 - -
5 Sobic.004G119800 expansin precursor, putative, expressed -
6 Sobic.006G135300 expressed protein -
7 Sobic.001G360500 peroxidase precursor, putative, expressed K00430: peroxidase
8 Sobic.004G333000 hypothetical protein -
9 Sobic.002G146000 "Localized in cytoplasm, involved in the process of drought defense"(PubMedID : 27231650)@dehydrogenase, putative, expressed K09753: cinnamoyl-CoA reductase
10 Sobic.006G196400 U-box, putative, expressed -
11 Sobic.007G090472 - -
12 Sobic.007G073000 - -
13 Sobic.010G113100 cytokinin-O-glucosyltransferase 2, putative, expressed -
14 Sobic.006G019700 transferase family protein, putative, expressed -
15 Sobic.004G106100 peroxidase precursor, putative, expressed K00430: peroxidase
16 Sobic.004G306900 amino acid transporter, putative, expressed -
17 Sobic.003G000100 STIGL1 - Stigma-specific Stig1 family protein precursor, expressed -
18 Sobic.001G274400 serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
19 Sobic.009G259800 zinc finger, C3HC4 type domain containing protein, expressed K10664: E3 ubiquitin-protein ligase ATL6/9/15/31/42/55
20 Sobic.006G031100 CAP (Cysteine-rich secretory proteins("PubMedID : 26759170,PubMedID : 24597475")@SCP-like extracellular protein, expressed -


Gene co-expression network
sample Sobic006G003600 Sobic006G003600 Sobic006G092700 Sobic006G092700 Sobic006G003600--Sobic006G092700 Sobic010G028100 Sobic010G028100 Sobic006G003600--Sobic010G028100 Sobic010G082000 Sobic010G082000 Sobic006G003600--Sobic010G082000 Sobic008G164450 Sobic008G164450 Sobic006G003600--Sobic008G164450 Sobic004G119800 Sobic004G119800 Sobic006G003600--Sobic004G119800 Sobic006G135300 Sobic006G135300 Sobic006G003600--Sobic006G135300 Sobic001G360500 Sobic001G360500 Sobic006G003600--Sobic001G360500 Sobic004G333000 Sobic004G333000 Sobic006G003600--Sobic004G333000 Sobic002G146000 Sobic002G146000 Sobic006G003600--Sobic002G146000 Sobic006G092700--Sobic006G135300 Sobic006G092700--Sobic010G082000 Sobic006G092700--Sobic010G028100 Sobic003G000100 Sobic003G000100 Sobic006G092700--Sobic003G000100 Sobic007G073000 Sobic007G073000 Sobic006G092700--Sobic007G073000 Sobic010G152400 Sobic010G152400 Sobic006G092700--Sobic010G152400 Sobic006G092700--Sobic002G146000 Sobic004G306900 Sobic004G306900 Sobic006G092700--Sobic004G306900 Sobic006G019700 Sobic006G019700 Sobic006G092700--Sobic006G019700 Sobic010G028100--Sobic006G092700 Sobic010G028100--Sobic006G135300 Sobic010G028100--Sobic003G000100 Sobic007G090472 Sobic007G090472 Sobic010G028100--Sobic007G090472 Sobic010G028100--Sobic010G082000 Sobic010G028100--Sobic002G146000 Sobic010G113100 Sobic010G113100 Sobic010G028100--Sobic010G113100 Sobic010G028100--Sobic006G003600 Sobic003G182200 Sobic003G182200 Sobic010G028100--Sobic003G182200 Sobic010G082000--Sobic006G092700 Sobic003G240400 Sobic003G240400 Sobic010G082000--Sobic003G240400 Sobic010G082000--Sobic006G135300 Sobic010G082000--Sobic010G152400 Sobic006G028500 Sobic006G028500 Sobic010G082000--Sobic006G028500 Sobic003G215300 Sobic003G215300 Sobic010G082000--Sobic003G215300 Sobic010G082000--Sobic006G019700 Sobic010G082000--Sobic007G073000 Sobic006G196400 Sobic006G196400 Sobic010G082000--Sobic006G196400 Sobic009G181600 Sobic009G181600 Sobic008G164450--Sobic009G181600 Sobic001G506800 Sobic001G506800 Sobic008G164450--Sobic001G506800 Sobic008G164450--Sobic006G092700 Sobic008G164450--Sobic002G146000 Sobic008G164450--Sobic010G113100 Sobic008G164450--Sobic006G135300 Sobic008G164450--Sobic010G028100 Sobic008G164450--Sobic006G003600 Sobic007G037600 Sobic007G037600 Sobic008G164450--Sobic007G037600 Sobic005G080600 Sobic005G080600 Sobic004G119800--Sobic005G080600 Sobic004G119800--Sobic004G306900 Sobic004G119800--Sobic006G196400 Sobic009G259800 Sobic009G259800 Sobic004G119800--Sobic009G259800 Sobic001G218400 Sobic001G218400 Sobic004G119800--Sobic001G218400 Sobic006G106900 Sobic006G106900 Sobic004G119800--Sobic006G106900 Sobic007G206800 Sobic007G206800 Sobic004G119800--Sobic007G206800 Sobic006G205700 Sobic006G205700 Sobic004G119800--Sobic006G205700 Sobic004G119800--Sobic006G092700 Sobic006G135300--Sobic006G092700 Sobic006G135300--Sobic010G082000 Sobic006G135300--Sobic007G073000 Sobic006G135300--Sobic010G028100 Sobic006G135300--Sobic006G019700 Sobic006G135300--Sobic010G152400 Sobic003G322100 Sobic003G322100 Sobic006G135300--Sobic003G322100 Sobic006G135300--Sobic004G306900 Sobic006G135300--Sobic002G146000 Sobic001G360500--Sobic007G090472 Sobic001G360500--Sobic010G082000 Sobic001G360500--Sobic007G073000 Sobic002G101400 Sobic002G101400 Sobic001G360500--Sobic002G101400 Sobic007G057400 Sobic007G057400 Sobic001G360500--Sobic007G057400 Sobic001G360500--Sobic006G092700 Sobic006G229100 Sobic006G229100 Sobic001G360500--Sobic006G229100 Sobic001G360500--Sobic006G003600 Sobic001G360500--Sobic003G322100 Sobic004G333000--Sobic006G003600 Sobic005G224200 Sobic005G224200 Sobic004G333000--Sobic005G224200 Sobic004G333000--Sobic007G057400 Sobic004G333000--Sobic006G092700 Sobic004G333000--Sobic004G119800 Sobic004G333000--Sobic010G082000 Sobic004G333000--Sobic001G360500 Sobic002G259100 Sobic002G259100 Sobic004G333000--Sobic002G259100 Sobic004G333000--Sobic006G135300 Sobic002G146000--Sobic007G073000 Sobic002G146000--Sobic006G092700 Sobic002G146000--Sobic007G037600 Sobic003G353200 Sobic003G353200 Sobic002G146000--Sobic003G353200 Sobic002G146000--Sobic003G000100 Sobic006G085700 Sobic006G085700 Sobic002G146000--Sobic006G085700 Sobic010G031700 Sobic010G031700 Sobic002G146000--Sobic010G031700 Sobic002G146000--Sobic003G215300 Sobic004G106100 Sobic004G106100 Sobic002G146000--Sobic004G106100
Octagon: transcription factors


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