Gene annotation
Transcriptome id Sobic.004G333000.1
Synonym
Functional annotation hypothetical protein
UniProt C6JSF2
Pfam -
Panther DB PTHR33743 PTHR33743:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g55580.1 : hypothetical protein
MaizeGDB (Corn) Zm00025a022495
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G003600 transporter family protein, putative, expressed -
2 Sobic.005G224200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RGH1A, putative, expressed -
3 Sobic.007G057400 - -
4 Sobic.006G092700 MLO domain containing protein, putative, expressed K08472: mlo protein
5 Sobic.004G119800 expansin precursor, putative, expressed -
6 Sobic.010G082000 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
7 Sobic.001G360500 peroxidase precursor, putative, expressed K00430: peroxidase
8 Sobic.002G259100 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@auxin responsive protein, putative, expressed K14488: SAUR family protein
9 Sobic.006G135300 expressed protein -
10 Sobic.008G164450 - -
11 Sobic.001G506800 exostosin family domain containing protein, expressed -
12 Sobic.007G073000 - -
13 Sobic.004G306900 amino acid transporter, putative, expressed -
14 Sobic.004G193500 expressed protein -
15 Sobic.004G009400 transporter, major facilitator family, putative, expressed K02575: NRT, narK, nrtP, MFS transporter, NNP family, nitrate/nitrite transporter
16 Sobic.001G149400 ankyrin repeat domain-containing protein 50, putative, expressed -
17 Sobic.004G014600 disease resistance protein RGA2, putative, expressed -
18 Sobic.003G203600 aldehyde dehydrogenase, putative, expressed K12355: coniferyl-aldehyde dehydrogenase
19 Sobic.002G195600 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
20 Sobic.005G177400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./middle senescence marker during developmental senescence(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase


Gene co-expression network
sample Sobic004G333000 Sobic004G333000 Sobic006G003600 Sobic006G003600 Sobic004G333000--Sobic006G003600 Sobic005G224200 Sobic005G224200 Sobic004G333000--Sobic005G224200 Sobic007G057400 Sobic007G057400 Sobic004G333000--Sobic007G057400 Sobic006G092700 Sobic006G092700 Sobic004G333000--Sobic006G092700 Sobic004G119800 Sobic004G119800 Sobic004G333000--Sobic004G119800 Sobic010G082000 Sobic010G082000 Sobic004G333000--Sobic010G082000 Sobic001G360500 Sobic001G360500 Sobic004G333000--Sobic001G360500 Sobic002G259100 Sobic002G259100 Sobic004G333000--Sobic002G259100 Sobic006G135300 Sobic006G135300 Sobic004G333000--Sobic006G135300 Sobic006G003600--Sobic006G092700 Sobic010G028100 Sobic010G028100 Sobic006G003600--Sobic010G028100 Sobic006G003600--Sobic010G082000 Sobic008G164450 Sobic008G164450 Sobic006G003600--Sobic008G164450 Sobic006G003600--Sobic004G119800 Sobic006G003600--Sobic006G135300 Sobic006G003600--Sobic001G360500 Sobic006G003600--Sobic004G333000 Sobic002G146000 Sobic002G146000 Sobic006G003600--Sobic002G146000 Sobic005G224200--Sobic002G259100 Sobic004G014600 Sobic004G014600 Sobic005G224200--Sobic004G014600 Sobic005G182800 Sobic005G182800 Sobic005G224200--Sobic005G182800 Sobic005G224200--Sobic004G333000 Sobic005G224200--Sobic006G135300 Sobic007G073000 Sobic007G073000 Sobic005G224200--Sobic007G073000 Sobic007G135100 Sobic007G135100 Sobic005G224200--Sobic007G135100 Sobic007G186500 Sobic007G186500 Sobic005G224200--Sobic007G186500 Sobic007G090600 Sobic007G090600 Sobic005G224200--Sobic007G090600 Sobic007G057400--Sobic001G360500 Sobic010G113100 Sobic010G113100 Sobic007G057400--Sobic010G113100 Sobic003G053600 Sobic003G053600 Sobic007G057400--Sobic003G053600 Sobic009G088500 Sobic009G088500 Sobic007G057400--Sobic009G088500 Sobic002G101400 Sobic002G101400 Sobic007G057400--Sobic002G101400 Sobic005G063400 Sobic005G063400 Sobic007G057400--Sobic005G063400 Sobic007G057400--Sobic006G003600 Sobic007G057400--Sobic006G092700 Sobic007G057400--Sobic008G164450 Sobic006G092700--Sobic006G135300 Sobic006G092700--Sobic010G082000 Sobic006G092700--Sobic010G028100 Sobic003G000100 Sobic003G000100 Sobic006G092700--Sobic003G000100 Sobic006G092700--Sobic007G073000 Sobic010G152400 Sobic010G152400 Sobic006G092700--Sobic010G152400 Sobic006G092700--Sobic002G146000 Sobic004G306900 Sobic004G306900 Sobic006G092700--Sobic004G306900 Sobic006G019700 Sobic006G019700 Sobic006G092700--Sobic006G019700 Sobic005G080600 Sobic005G080600 Sobic004G119800--Sobic005G080600 Sobic004G119800--Sobic004G306900 Sobic006G196400 Sobic006G196400 Sobic004G119800--Sobic006G196400 Sobic009G259800 Sobic009G259800 Sobic004G119800--Sobic009G259800 Sobic001G218400 Sobic001G218400 Sobic004G119800--Sobic001G218400 Sobic006G106900 Sobic006G106900 Sobic004G119800--Sobic006G106900 Sobic007G206800 Sobic007G206800 Sobic004G119800--Sobic007G206800 Sobic006G205700 Sobic006G205700 Sobic004G119800--Sobic006G205700 Sobic004G119800--Sobic006G092700 Sobic010G082000--Sobic006G092700 Sobic003G240400 Sobic003G240400 Sobic010G082000--Sobic003G240400 Sobic010G082000--Sobic006G135300 Sobic010G082000--Sobic010G152400 Sobic006G028500 Sobic006G028500 Sobic010G082000--Sobic006G028500 Sobic003G215300 Sobic003G215300 Sobic010G082000--Sobic003G215300 Sobic010G082000--Sobic006G019700 Sobic010G082000--Sobic007G073000 Sobic010G082000--Sobic006G196400 Sobic007G090472 Sobic007G090472 Sobic001G360500--Sobic007G090472 Sobic001G360500--Sobic010G082000 Sobic001G360500--Sobic007G073000 Sobic001G360500--Sobic002G101400 Sobic001G360500--Sobic007G057400 Sobic001G360500--Sobic006G092700 Sobic006G229100 Sobic006G229100 Sobic001G360500--Sobic006G229100 Sobic001G360500--Sobic006G003600 Sobic003G322100 Sobic003G322100 Sobic001G360500--Sobic003G322100 Sobic002G259100--Sobic005G224200 Sobic001G503000 Sobic001G503000 Sobic002G259100--Sobic001G503000 Sobic006G209000 Sobic006G209000 Sobic002G259100--Sobic006G209000 Sobic005G115300 Sobic005G115300 Sobic002G259100--Sobic005G115300 Sobic010G096700 Sobic010G096700 Sobic002G259100--Sobic010G096700 Sobic002G259100--Sobic003G215300 Sobic002G259100--Sobic007G073000 Sobic004G312500 Sobic004G312500 Sobic002G259100--Sobic004G312500 Sobic002G259100--Sobic005G182800 Sobic006G135300--Sobic006G092700 Sobic006G135300--Sobic010G082000 Sobic006G135300--Sobic007G073000 Sobic006G135300--Sobic010G028100 Sobic006G135300--Sobic006G019700 Sobic006G135300--Sobic010G152400 Sobic006G135300--Sobic003G322100 Sobic006G135300--Sobic004G306900 Sobic006G135300--Sobic002G146000
Octagon: transcription factors


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