Gene annotation
Transcriptome id Sobic.004G119800.1
Synonym Sb04g009990, ATEXPA11, ATHEXPALPHA1.14, ATEXP11, EXP11, EXPA11
Functional annotation expansin precursor, putative, expressed
UniProt C5XZM0
Pfam PF03330 PF01357
Panther DB PTHR31867 PTHR31867:SF19
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G20190 : expansin 11
RAP-DB (Rice) LOC_Os02g16800.1 : expansin precursor, putative, expressed
MaizeGDB (Corn) Zm00025a027043 , Zm00025a043994 , Zm00025a019879 , Zm00025a019850 , Zm00025a019851 , Zm00025a019852 , Zm00025a019849
Brachypodium KQJ94333 , KQJ94332 , KQJ94340 , KQK12421
Barley HORVU4Hr1G018460.5 , HORVU4Hr1G018460.4 , HORVU4Hr1G018460.1 , HORVU4Hr1G018460.3 , HORVU4Hr1G018460.2 , HORVU3Hr1G034030.4 , HORVU3Hr1G034030.3 , HORVU3Hr1G034030.2 , HORVU3Hr1G034030.1
Wheat TraesCS3D02G175800 , TraesCS3A02G165900 , TraesCS3D02G176000 , TraesCS3A02G165600 , TraesCS3B02G199900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G080600 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
2 Sobic.004G306900 amino acid transporter, putative, expressed -
3 Sobic.006G196400 U-box, putative, expressed -
4 Sobic.009G259800 zinc finger, C3HC4 type domain containing protein, expressed K10664: E3 ubiquitin-protein ligase ATL6/9/15/31/42/55
5 Sobic.001G218400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MATH domain containing protein, expressed -
6 Sobic.006G106900 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -
7 Sobic.007G206800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lectin-like protein kinase, putative, expressed -
8 Sobic.006G205700 glycosyl hydrolases family 16, putative, expressed -
9 Sobic.006G092700 MLO domain containing protein, putative, expressed K08472: mlo protein
10 Sobic.007G220400 receptor-like protein kinase 2 precursor, putative, expressed -
11 Sobic.001G414800 dirigent, putative, expressed -
12 Sobic.006G003600 transporter family protein, putative, expressed -
13 Sobic.010G010000 plant protein of unknown function domain containing protein, expressed -
14 Sobic.003G441800 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
15 Sobic.010G234500 O-methyltransferase, putative, expressed -
16 Sobic.005G217766 - -
17 Sobic.007G100700 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
18 Sobic.004G106100 peroxidase precursor, putative, expressed K00430: peroxidase
19 Sobic.003G441601 - -
20 Sobic.002G111900 receptor-like kinase, putative, expressed -


Gene co-expression network
sample Sobic004G119800 Sobic004G119800 Sobic005G080600 Sobic005G080600 Sobic004G119800--Sobic005G080600 Sobic004G306900 Sobic004G306900 Sobic004G119800--Sobic004G306900 Sobic006G196400 Sobic006G196400 Sobic004G119800--Sobic006G196400 Sobic009G259800 Sobic009G259800 Sobic004G119800--Sobic009G259800 Sobic001G218400 Sobic001G218400 Sobic004G119800--Sobic001G218400 Sobic006G106900 Sobic006G106900 Sobic004G119800--Sobic006G106900 Sobic007G206800 Sobic007G206800 Sobic004G119800--Sobic007G206800 Sobic006G205700 Sobic006G205700 Sobic004G119800--Sobic006G205700 Sobic006G092700 Sobic006G092700 Sobic004G119800--Sobic006G092700 Sobic005G080600--Sobic007G206800 Sobic005G080600--Sobic006G196400 Sobic007G220400 Sobic007G220400 Sobic005G080600--Sobic007G220400 Sobic002G391400 Sobic002G391400 Sobic005G080600--Sobic002G391400 Sobic005G080600--Sobic009G259800 Sobic005G080600--Sobic004G119800 Sobic002G334000 Sobic002G334000 Sobic005G080600--Sobic002G334000 Sobic002G068000 Sobic002G068000 Sobic005G080600--Sobic002G068000 Sobic010G241900 Sobic010G241900 Sobic005G080600--Sobic010G241900 Sobic006G028500 Sobic006G028500 Sobic004G306900--Sobic006G028500 Sobic003G064800 Sobic003G064800 Sobic004G306900--Sobic003G064800 Sobic007G086300 Sobic007G086300 Sobic004G306900--Sobic007G086300 Sobic003G000100 Sobic003G000100 Sobic004G306900--Sobic003G000100 Sobic004G106100 Sobic004G106100 Sobic004G306900--Sobic004G106100 Sobic006G019700 Sobic006G019700 Sobic004G306900--Sobic006G019700 Sobic003G319400 Sobic003G319400 Sobic004G306900--Sobic003G319400 Sobic010G152400 Sobic010G152400 Sobic004G306900--Sobic010G152400 Sobic004G322100 Sobic004G322100 Sobic004G306900--Sobic004G322100 Sobic006G031100 Sobic006G031100 Sobic006G196400--Sobic006G031100 Sobic007G090600 Sobic007G090600 Sobic006G196400--Sobic007G090600 Sobic006G196400--Sobic005G080600 Sobic003G240400 Sobic003G240400 Sobic006G196400--Sobic003G240400 Sobic003G215300 Sobic003G215300 Sobic006G196400--Sobic003G215300 Sobic002G115600 Sobic002G115600 Sobic006G196400--Sobic002G115600 Sobic005G175900 Sobic005G175900 Sobic006G196400--Sobic005G175900 Sobic010G082000 Sobic010G082000 Sobic006G196400--Sobic010G082000 Sobic006G196400--Sobic006G205700 Sobic009G259800--Sobic005G080600 Sobic003G185300 Sobic003G185300 Sobic009G259800--Sobic003G185300 Sobic009G259800--Sobic007G206800 Sobic009G259800--Sobic006G019700 Sobic007G100700 Sobic007G100700 Sobic009G259800--Sobic007G100700 Sobic009G259800--Sobic006G196400 Sobic009G259800--Sobic002G068000 Sobic010G234500 Sobic010G234500 Sobic009G259800--Sobic010G234500 Sobic003G426500 Sobic003G426500 Sobic009G259800--Sobic003G426500 Sobic006G097900 Sobic006G097900 Sobic001G218400--Sobic006G097900 Sobic004G121600 Sobic004G121600 Sobic001G218400--Sobic004G121600 Sobic001G181600 Sobic001G181600 Sobic001G218400--Sobic001G181600 Sobic003G441800 Sobic003G441800 Sobic001G218400--Sobic003G441800 Sobic010G191600 Sobic010G191600 Sobic001G218400--Sobic010G191600 Sobic003G154500 Sobic003G154500 Sobic001G218400--Sobic003G154500 Sobic003G441700 Sobic003G441700 Sobic001G218400--Sobic003G441700 Sobic010G010000 Sobic010G010000 Sobic001G218400--Sobic010G010000 Sobic005G119900 Sobic005G119900 Sobic001G218400--Sobic005G119900 Sobic006G106900--Sobic003G319400 Sobic005G202300 Sobic005G202300 Sobic006G106900--Sobic005G202300 Sobic006G106900--Sobic003G064800 Sobic001G414800 Sobic001G414800 Sobic006G106900--Sobic001G414800 Sobic006G106900--Sobic004G306900 Sobic001G507100 Sobic001G507100 Sobic006G106900--Sobic001G507100 Sobic009G181600 Sobic009G181600 Sobic006G106900--Sobic009G181600 Sobic001G438200 Sobic001G438200 Sobic006G106900--Sobic001G438200 Sobic003G280000 Sobic003G280000 Sobic006G106900--Sobic003G280000 Sobic007G206800--Sobic002G391400 Sobic007G206800--Sobic002G334000 Sobic007G206800--Sobic007G220400 Sobic007G206800--Sobic010G241900 Sobic010G191700 Sobic010G191700 Sobic007G206800--Sobic010G191700 Sobic007G206800--Sobic006G205700 Sobic007G206800--Sobic005G080600 Sobic002G111900 Sobic002G111900 Sobic007G206800--Sobic002G111900 Sobic002G392100 Sobic002G392100 Sobic007G206800--Sobic002G392100 Sobic006G205700--Sobic002G391400 Sobic006G205700--Sobic003G441800 Sobic006G205700--Sobic004G106100 Sobic003G167300 Sobic003G167300 Sobic006G205700--Sobic003G167300 Sobic006G205700--Sobic010G241900 Sobic005G046400 Sobic005G046400 Sobic006G205700--Sobic005G046400 Sobic006G205700--Sobic007G206800 Sobic003G441601 Sobic003G441601 Sobic006G205700--Sobic003G441601 Sobic003G095100 Sobic003G095100 Sobic006G205700--Sobic003G095100 Sobic006G135300 Sobic006G135300 Sobic006G092700--Sobic006G135300 Sobic006G092700--Sobic010G082000 Sobic010G028100 Sobic010G028100 Sobic006G092700--Sobic010G028100 Sobic006G092700--Sobic003G000100 Sobic007G073000 Sobic007G073000 Sobic006G092700--Sobic007G073000 Sobic006G092700--Sobic010G152400 Sobic002G146000 Sobic002G146000 Sobic006G092700--Sobic002G146000 Sobic006G092700--Sobic004G306900 Sobic006G092700--Sobic006G019700
Octagon: transcription factors


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