Gene annotation
Transcriptome id Sobic.002G146000.1
Synonym Sb02g014910, IRX4, CCR1, SbCCR2-1, ATCCR1
Functional annotation "Localized in cytoplasm, involved in the process of drought defense" (PubMedID : 27231650)
dehydrogenase, putative, expressed
UniProt A0A1W0W3Z5
Pfam PF01073
Panther DB PTHR10366 PTHR10366:SF333
NCBI CDD KOG1502; Flavonol reductase/cinnamoyl-CoA reductase
KEGG Orthology K09753; cinnamoyl-CoA reductase
Gene Ontology GO:0016616; oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0006694steroid biosynthetic process GO:00038543-beta-hydroxy-delta5-steroid dehydrogenase activity


Orthologs (automatic annotation)
TAIR AT1G15950 : cinnamoyl coa reductase 1
RAP-DB (Rice) LOC_Os09g04050.1 : dehydrogenase, putative, expressed
MaizeGDB (Corn) Zm00025a019226 , Zm00025a045929
Brachypodium -
Barley HORVU5Hr1G050940.3 , HORVU5Hr1G050940.1 , HORVU5Hr1G050940.6 , HORVU5Hr1G050940.5 , HORVU5Hr1G050940.4
Wheat TraesCS5A02G163400 , TraesCS5B02G069600 , TraesCS5B02G160700 , TraesCS5D02G168400 , TraesCS5D02G073300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G073000 - -
2 Sobic.006G092700 MLO domain containing protein, putative, expressed K08472: mlo protein
3 Sobic.007G037600 C4-dicarboxylate transporter/malic acid transport protein, expressed -
4 Sobic.003G353200 similar to Putative laccase(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Laccase 2 LAC2 (Os)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
5 Sobic.003G000100 STIGL1 - Stigma-specific Stig1 family protein precursor, expressed -
6 Sobic.006G085700 OsPDIL1-2 protein disulfide isomerase PDIL1-2, expressed K09580: PDIA1, protein disulfide-isomerase A1
7 Sobic.010G031700 thaumatin, putative, expressed -
8 Sobic.003G215300 pleiotropic drug resistance protein, putative, expressed -
9 Sobic.004G106100 peroxidase precursor, putative, expressed K00430: peroxidase
10 Sobic.010G028100 GDP-mannose 4,6 dehydratase 2, putative, expressed K01711: gmd, GDPmannose 4,6-dehydratase
11 Sobic.007G090600 CSLC3 - cellulose synthase-like family C, expressed -
12 Sobic.006G135300 expressed protein -
13 Sobic.008G164450 - -
14 Sobic.006G031100 CAP (Cysteine-rich secretory proteins("PubMedID : 26759170,PubMedID : 24597475")@SCP-like extracellular protein, expressed -
15 Sobic.003G282300 POEI51 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
16 Sobic.003G441800 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
17 Sobic.009G181600 indole-3-acetate beta-glucosyltransferase, putative, expressed -
18 Sobic.002G233200 plastocyanin-like domain containing protein, putative, expressed -
19 Sobic.004G271800 WRKY66, expressed -
20 Sobic.004G014600 disease resistance protein RGA2, putative, expressed -


Gene co-expression network
sample Sobic002G146000 Sobic002G146000 Sobic007G073000 Sobic007G073000 Sobic002G146000--Sobic007G073000 Sobic006G092700 Sobic006G092700 Sobic002G146000--Sobic006G092700 Sobic007G037600 Sobic007G037600 Sobic002G146000--Sobic007G037600 Sobic003G353200 Sobic003G353200 Sobic002G146000--Sobic003G353200 Sobic003G000100 Sobic003G000100 Sobic002G146000--Sobic003G000100 Sobic006G085700 Sobic006G085700 Sobic002G146000--Sobic006G085700 Sobic010G031700 Sobic010G031700 Sobic002G146000--Sobic010G031700 Sobic003G215300 Sobic003G215300 Sobic002G146000--Sobic003G215300 Sobic004G106100 Sobic004G106100 Sobic002G146000--Sobic004G106100 Sobic007G073000--Sobic006G092700 Sobic003G322100 Sobic003G322100 Sobic007G073000--Sobic003G322100 Sobic007G073000--Sobic003G215300 Sobic007G073000--Sobic002G146000 Sobic006G135300 Sobic006G135300 Sobic007G073000--Sobic006G135300 Sobic002G195600 Sobic002G195600 Sobic007G073000--Sobic002G195600 Sobic010G082000 Sobic010G082000 Sobic007G073000--Sobic010G082000 Sobic007G090472 Sobic007G090472 Sobic007G073000--Sobic007G090472 Sobic003G240400 Sobic003G240400 Sobic007G073000--Sobic003G240400 Sobic006G092700--Sobic006G135300 Sobic006G092700--Sobic010G082000 Sobic010G028100 Sobic010G028100 Sobic006G092700--Sobic010G028100 Sobic006G092700--Sobic003G000100 Sobic006G092700--Sobic007G073000 Sobic010G152400 Sobic010G152400 Sobic006G092700--Sobic010G152400 Sobic006G092700--Sobic002G146000 Sobic004G306900 Sobic004G306900 Sobic006G092700--Sobic004G306900 Sobic006G019700 Sobic006G019700 Sobic006G092700--Sobic006G019700 Sobic003G441800 Sobic003G441800 Sobic007G037600--Sobic003G441800 Sobic007G037600--Sobic003G353200 Sobic007G037600--Sobic010G031700 Sobic007G037600--Sobic002G146000 Sobic003G053200 Sobic003G053200 Sobic007G037600--Sobic003G053200 Sobic004G029400 Sobic004G029400 Sobic007G037600--Sobic004G029400 Sobic001G181600 Sobic001G181600 Sobic007G037600--Sobic001G181600 Sobic001G301000 Sobic001G301000 Sobic007G037600--Sobic001G301000 Sobic006G205700 Sobic006G205700 Sobic007G037600--Sobic006G205700 Sobic003G353200--Sobic007G037600 Sobic003G280000 Sobic003G280000 Sobic003G353200--Sobic003G280000 Sobic003G353200--Sobic002G146000 Sobic003G353200--Sobic010G031700 Sobic005G202300 Sobic005G202300 Sobic003G353200--Sobic005G202300 Sobic003G053600 Sobic003G053600 Sobic003G353200--Sobic003G053600 Sobic006G106900 Sobic006G106900 Sobic003G353200--Sobic006G106900 Sobic001G218400 Sobic001G218400 Sobic003G353200--Sobic001G218400 Sobic009G162300 Sobic009G162300 Sobic003G353200--Sobic009G162300 Sobic003G000100--Sobic010G152400 Sobic004G322100 Sobic004G322100 Sobic003G000100--Sobic004G322100 Sobic006G003100 Sobic006G003100 Sobic003G000100--Sobic006G003100 Sobic003G000100--Sobic004G306900 Sobic003G000100--Sobic006G092700 Sobic003G000100--Sobic004G106100 Sobic004G271800 Sobic004G271800 Sobic003G000100--Sobic004G271800 Sobic003G000100--Sobic003G240400 Sobic007G086300 Sobic007G086300 Sobic003G000100--Sobic007G086300 Sobic003G282300 Sobic003G282300 Sobic006G085700--Sobic003G282300 Sobic006G031100 Sobic006G031100 Sobic006G085700--Sobic006G031100 Sobic007G090600 Sobic007G090600 Sobic006G085700--Sobic007G090600 Sobic006G085700--Sobic002G146000 Sobic004G014600 Sobic004G014600 Sobic006G085700--Sobic004G014600 Sobic003G140200 Sobic003G140200 Sobic006G085700--Sobic003G140200 Sobic006G085700--Sobic003G441800 Sobic005G182800 Sobic005G182800 Sobic006G085700--Sobic005G182800 Sobic010G152500 Sobic010G152500 Sobic006G085700--Sobic010G152500 Sobic010G031700--Sobic003G053200 Sobic010G031700--Sobic007G037600 Sobic010G031700--Sobic003G441800 Sobic010G031700--Sobic004G106100 Sobic010G031700--Sobic004G029400 Sobic010G031700--Sobic006G003100 Sobic010G031700--Sobic006G205700 Sobic002G233200 Sobic002G233200 Sobic010G031700--Sobic002G233200 Sobic010G031700--Sobic003G353200 Sobic003G215300--Sobic007G090600 Sobic003G215300--Sobic006G031100 Sobic002G115600 Sobic002G115600 Sobic003G215300--Sobic002G115600 Sobic003G215300--Sobic003G240400 Sobic006G196400 Sobic006G196400 Sobic003G215300--Sobic006G196400 Sobic001G263300 Sobic001G263300 Sobic003G215300--Sobic001G263300 Sobic003G215300--Sobic007G073000 Sobic001G503000 Sobic001G503000 Sobic003G215300--Sobic001G503000 Sobic002G029600 Sobic002G029600 Sobic003G215300--Sobic002G029600 Sobic004G106100--Sobic007G086300 Sobic004G106100--Sobic006G205700 Sobic004G106100--Sobic004G306900 Sobic004G106100--Sobic003G000100 Sobic004G106100--Sobic010G031700 Sobic004G106100--Sobic003G282300 Sobic002G391400 Sobic002G391400 Sobic004G106100--Sobic002G391400 Sobic004G106100--Sobic002G233200 Sobic004G106100--Sobic010G152400
Octagon: transcription factors


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