Gene annotation
Transcriptome id Sobic.007G037600.1
Synonym SLAH3, Sb07g003180
Functional annotation C4-dicarboxylate transporter/malic acid transport protein, expressed
UniProt A0A1B6PFE0
Pfam PF03595
Panther DB PTHR31269 PTHR31269:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0008308voltage-gated anion channel activity GO:0006873cellular ion homeostasis


Orthologs (automatic annotation)
TAIR AT5G24030 : SLAC1 homologue 3
RAP-DB (Rice) LOC_Os01g28840.1 : C4-dicarboxylate transporter/malic acid transport protein, expressed
MaizeGDB (Corn) Zm00025a043265 , Zm00025a044733 , Zm00025a022844 , Zm00025a037581 , Zm00025a036732 , Zm00025a038583 , Zm00025a025514 , Zm00025a028368
Brachypodium KQK07006 , KQK07007 , KQK03387 , KQK07008 , KQK07009 , KQK08799 , PNT72420 , KQK08801 , KQK08800
Barley HORVU1Hr1G030060.8 , HORVU1Hr1G030060.9 , HORVU1Hr1G030060.2 , HORVU1Hr1G030060.6 , HORVU1Hr1G030060.4 , HORVU3Hr1G055740.14 , HORVU3Hr1G030850.1 , HORVU3Hr1G030850.3 , HORVU3Hr1G030850.2 , HORVU3Hr1G055740.4 , HORVU3Hr1G055740.5 , HORVU3Hr1G055740.6 , HORVU3Hr1G055740.7 , HORVU3Hr1G055740.1 , HORVU3Hr1G055740.3 , HORVU3Hr1G055740.8 , HORVU3Hr1G055740.9 , HORVU3Hr1G030840.2 , HORVU3Hr1G030840.3 , HORVU3Hr1G030840.1 , HORVU1Hr1G030060.10 , HORVU1Hr1G030060.11 , HORVU1Hr1G030060.12 , HORVU1Hr1G030060.13 , HORVU3Hr1G055740.2 , HORVU3Hr1G055740.15 , HORVU3Hr1G055740.12 , HORVU3Hr1G055740.13 , HORVU3Hr1G055740.10 , HORVU3Hr1G055740.11 , HORVU3Hr1G005540.3 , HORVU3Hr1G005540.2 , HORVU3Hr1G005540.1 , HORVU3Hr1G005540.4
Wheat TraesCS3B02G178600 , TraesCS1D02G126500 , TraesCS1A02G127500 , TraesCS3D02G159600 , TraesCS1B02G147400 , TraesCS1A02G423000 , TraesCS1B02G455100 , TraesCS3D02G228400 , TraesCS3A02G151400 , TraesCS3D02G017800 , TraesCS3A02G225100 , TraesCS3B02G254700 , TraesCS1B02G456400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G441800 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
2 Sobic.003G353200 similar to Putative laccase(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Laccase 2 LAC2 (Os)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
3 Sobic.010G031700 thaumatin, putative, expressed -
4 Sobic.002G146000 "Localized in cytoplasm, involved in the process of drought defense"(PubMedID : 27231650)@dehydrogenase, putative, expressed K09753: cinnamoyl-CoA reductase
5 Sobic.003G053200 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
6 Sobic.004G029400 periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
7 Sobic.001G181600 dehydrogenase/reductase, putative, expressed -
8 Sobic.001G301000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expansin precursor, putative, expressed -
9 Sobic.006G205700 glycosyl hydrolases family 16, putative, expressed -
10 Sobic.009G181600 indole-3-acetate beta-glucosyltransferase, putative, expressed -
11 Sobic.005G119900 reticuline oxidase-like protein precursor, putative, expressed -
12 Sobic.004G121600 expansin precursor, putative, expressed -
13 Sobic.001G218400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MATH domain containing protein, expressed -
14 Sobic.003G095100 glycosyltransferase protein, putative, expressed -
15 Sobic.003G167300 peroxidase precursor, putative, expressed K00430: peroxidase
16 Sobic.004G106100 peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.003G441700 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
18 Sobic.003G282300 POEI51 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
19 Sobic.006G097900 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
20 Sobic.003G154500 helix-loop-helix DNA-binding domain containing protein, expressed -


Gene co-expression network
sample Sobic007G037600 Sobic007G037600 Sobic003G441800 Sobic003G441800 Sobic007G037600--Sobic003G441800 Sobic003G353200 Sobic003G353200 Sobic007G037600--Sobic003G353200 Sobic010G031700 Sobic010G031700 Sobic007G037600--Sobic010G031700 Sobic002G146000 Sobic002G146000 Sobic007G037600--Sobic002G146000 Sobic003G053200 Sobic003G053200 Sobic007G037600--Sobic003G053200 Sobic004G029400 Sobic004G029400 Sobic007G037600--Sobic004G029400 Sobic001G181600 Sobic001G181600 Sobic007G037600--Sobic001G181600 Sobic001G301000 Sobic001G301000 Sobic007G037600--Sobic001G301000 Sobic006G205700 Sobic006G205700 Sobic007G037600--Sobic006G205700 Sobic003G441800--Sobic003G053200 Sobic003G441700 Sobic003G441700 Sobic003G441800--Sobic003G441700 Sobic003G441601 Sobic003G441601 Sobic003G441800--Sobic003G441601 Sobic005G046400 Sobic005G046400 Sobic003G441800--Sobic005G046400 Sobic003G441800--Sobic006G205700 Sobic004G121600 Sobic004G121600 Sobic003G441800--Sobic004G121600 Sobic005G119900 Sobic005G119900 Sobic003G441800--Sobic005G119900 Sobic003G441800--Sobic007G037600 Sobic009G065700 Sobic009G065700 Sobic003G441800--Sobic009G065700 Sobic003G353200--Sobic007G037600 Sobic003G280000 Sobic003G280000 Sobic003G353200--Sobic003G280000 Sobic003G353200--Sobic002G146000 Sobic003G353200--Sobic010G031700 Sobic005G202300 Sobic005G202300 Sobic003G353200--Sobic005G202300 Sobic003G053600 Sobic003G053600 Sobic003G353200--Sobic003G053600 Sobic006G106900 Sobic006G106900 Sobic003G353200--Sobic006G106900 Sobic001G218400 Sobic001G218400 Sobic003G353200--Sobic001G218400 Sobic009G162300 Sobic009G162300 Sobic003G353200--Sobic009G162300 Sobic010G031700--Sobic003G053200 Sobic010G031700--Sobic007G037600 Sobic010G031700--Sobic003G441800 Sobic004G106100 Sobic004G106100 Sobic010G031700--Sobic004G106100 Sobic010G031700--Sobic004G029400 Sobic006G003100 Sobic006G003100 Sobic010G031700--Sobic006G003100 Sobic010G031700--Sobic006G205700 Sobic002G233200 Sobic002G233200 Sobic010G031700--Sobic002G233200 Sobic010G031700--Sobic003G353200 Sobic007G073000 Sobic007G073000 Sobic002G146000--Sobic007G073000 Sobic006G092700 Sobic006G092700 Sobic002G146000--Sobic006G092700 Sobic002G146000--Sobic007G037600 Sobic002G146000--Sobic003G353200 Sobic003G000100 Sobic003G000100 Sobic002G146000--Sobic003G000100 Sobic006G085700 Sobic006G085700 Sobic002G146000--Sobic006G085700 Sobic002G146000--Sobic010G031700 Sobic003G215300 Sobic003G215300 Sobic002G146000--Sobic003G215300 Sobic002G146000--Sobic004G106100 Sobic003G053200--Sobic003G441800 Sobic003G053200--Sobic003G441700 Sobic003G053200--Sobic001G301000 Sobic003G053200--Sobic004G121600 Sobic003G053200--Sobic010G031700 Sobic003G053200--Sobic005G119900 Sobic003G053200--Sobic004G029400 Sobic001G231800 Sobic001G231800 Sobic003G053200--Sobic001G231800 Sobic003G053200--Sobic007G037600 Sobic004G029400--Sobic003G441800 Sobic004G029400--Sobic003G053200 Sobic004G029400--Sobic010G031700 Sobic004G029400--Sobic004G121600 Sobic004G029400--Sobic007G037600 Sobic001G539200 Sobic001G539200 Sobic004G029400--Sobic001G539200 Sobic009G181600 Sobic009G181600 Sobic004G029400--Sobic009G181600 Sobic003G282300 Sobic003G282300 Sobic004G029400--Sobic003G282300 Sobic004G029400--Sobic005G119900 Sobic003G154500 Sobic003G154500 Sobic001G181600--Sobic003G154500 Sobic001G181600--Sobic005G119900 Sobic001G181600--Sobic003G441700 Sobic006G097900 Sobic006G097900 Sobic001G181600--Sobic006G097900 Sobic001G181600--Sobic001G218400 Sobic009G055300 Sobic009G055300 Sobic001G181600--Sobic009G055300 Sobic007G212000 Sobic007G212000 Sobic001G181600--Sobic007G212000 Sobic007G202480 Sobic007G202480 Sobic001G181600--Sobic007G202480 Sobic007G015000 Sobic007G015000 Sobic001G181600--Sobic007G015000 Sobic001G301000--Sobic001G231800 Sobic008G010500 Sobic008G010500 Sobic001G301000--Sobic008G010500 Sobic001G301000--Sobic004G121600 Sobic001G301000--Sobic003G441700 Sobic001G301000--Sobic005G119900 Sobic001G301000--Sobic003G053200 Sobic010G268700 Sobic010G268700 Sobic001G301000--Sobic010G268700 Sobic010G245400 Sobic010G245400 Sobic001G301000--Sobic010G245400 Sobic001G301000--Sobic006G097900 Sobic002G391400 Sobic002G391400 Sobic006G205700--Sobic002G391400 Sobic006G205700--Sobic003G441800 Sobic006G205700--Sobic004G106100 Sobic003G167300 Sobic003G167300 Sobic006G205700--Sobic003G167300 Sobic010G241900 Sobic010G241900 Sobic006G205700--Sobic010G241900 Sobic006G205700--Sobic005G046400 Sobic007G206800 Sobic007G206800 Sobic006G205700--Sobic007G206800 Sobic006G205700--Sobic003G441601 Sobic003G095100 Sobic003G095100 Sobic006G205700--Sobic003G095100
Octagon: transcription factors


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