Gene annotation
Transcriptome id Sobic.005G218400.1,Sobic.005G218400.2
Synonym
Functional annotation NB-ARC domain containing protein, expressed
UniProt A0A1B6PU05
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF576
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G07040 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os10g04180.1 : NB-ARC domain containing protein, expressed
MaizeGDB (Corn) Zm00025a055560
Brachypodium KQK12047 , KQJ87635
Barley HORVU3Hr1G002150.1 , HORVU3Hr1G002150.3 , HORVU3Hr1G002150.2 , HORVU3Hr1G002150.5 , HORVU3Hr1G002150.4 , HORVU3Hr1G002150.7 , HORVU3Hr1G002150.6 , HORVU3Hr1G002150.9 , HORVU3Hr1G002150.8 , HORVU3Hr1G002150.11 , HORVU3Hr1G002150.10 , HORVU3Hr1G002150.12
Wheat TraesCS1B02G420400 , TraesCS1B02G420400 , TraesCS1B02G420400 , TraesCS4A02G487300 , TraesCS4A02G487300 , TraesCS5B02G540300 , TraesCS7A02G006200 , TraesCS7A02G004400 , TraesCS4A02G490900 , TraesCS4A02G493300 , TraesCS7D02G007600 , TraesCSU02G042600 , TraesCS2D02G042200 , TraesCS5B02G473500 , TraesCS5B02G473500 , TraesCS4B02G372900 , TraesCS3A02G014600 , TraesCS5D02G548500 , TraesCS7D02G006700 , TraesCS3D02G012600 , TraesCS3D02G012600 , TraesCSU02G154500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G218201 - -
2 Sobic.006G263800 HAD-superfamily hydrolase subfamily IA, variant 3, putative, expressed -
3 Sobic.005G141000 plant protein of unknown function domain containing protein, expressed -
4 Sobic.002G065400 OsSub3 - Putative Subtilisin homologue, expressed -
5 Sobic.005G218600 NBS-LRR disease resistance protein, putative, expressed -
6 Sobic.008G130700 expressed protein -
7 Sobic.004G253800 - -
8 Sobic.002G190100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.006G281066 - -
10 Sobic.005G020200 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
11 Sobic.002G124100 - -
12 Sobic.001G228300 SAP domain containing protein, expressed -
13 Sobic.001G142400 RIO1 family protein, expressed -
14 Sobic.003G120500 transmembrane protein 136, putative, expressed -
15 Sobic.005G084000 expressed protein -
16 Sobic.007G090415 - -
17 Sobic.005G022800 GTP binding protein, putative, expressed -
18 Sobic.005G083700 expressed protein -
19 Sobic.003G157500 oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -
20 Sobic.003G236300 tat pathway signal sequence family protein, expressed -


Gene co-expression network
sample Sobic005G218400 Sobic005G218400 Sobic005G218201 Sobic005G218201 Sobic005G218400--Sobic005G218201 Sobic006G263800 Sobic006G263800 Sobic005G218400--Sobic006G263800 Sobic005G141000 Sobic005G141000 Sobic005G218400--Sobic005G141000 Sobic002G065400 Sobic002G065400 Sobic005G218400--Sobic002G065400 Sobic005G218600 Sobic005G218600 Sobic005G218400--Sobic005G218600 Sobic008G130700 Sobic008G130700 Sobic005G218400--Sobic008G130700 Sobic004G253800 Sobic004G253800 Sobic005G218400--Sobic004G253800 Sobic002G190100 Sobic002G190100 Sobic005G218400--Sobic002G190100 Sobic006G281066 Sobic006G281066 Sobic005G218400--Sobic006G281066 Sobic005G218201--Sobic005G218600 Sobic004G044200 Sobic004G044200 Sobic005G218201--Sobic004G044200 Sobic002G209800 Sobic002G209800 Sobic005G218201--Sobic002G209800 Sobic004G038300 Sobic004G038300 Sobic005G218201--Sobic004G038300 Sobic003G120500 Sobic003G120500 Sobic005G218201--Sobic003G120500 Sobic005G200600 Sobic005G200600 Sobic005G218201--Sobic005G200600 Sobic006G238100 Sobic006G238100 Sobic005G218201--Sobic006G238100 Sobic001G541300 Sobic001G541300 Sobic005G218201--Sobic001G541300 Sobic001G255300 Sobic001G255300 Sobic005G218201--Sobic001G255300 Sobic007G116100 Sobic007G116100 Sobic006G263800--Sobic007G116100 Sobic006G263800--Sobic002G190100 Sobic002G140000 Sobic002G140000 Sobic006G263800--Sobic002G140000 Sobic001G281500 Sobic001G281500 Sobic006G263800--Sobic001G281500 Sobic005G022800 Sobic005G022800 Sobic006G263800--Sobic005G022800 Sobic001G099000 Sobic001G099000 Sobic006G263800--Sobic001G099000 Sobic010G027200 Sobic010G027200 Sobic006G263800--Sobic010G027200 Sobic006G237100 Sobic006G237100 Sobic006G263800--Sobic006G237100 Sobic001G120000 Sobic001G120000 Sobic006G263800--Sobic001G120000 Sobic005G141000--Sobic002G065400 Sobic005G020200 Sobic005G020200 Sobic005G141000--Sobic005G020200 Sobic001G229500 Sobic001G229500 Sobic005G141000--Sobic001G229500 Sobic005G141000--Sobic004G038300 Sobic005G141000--Sobic002G209800 Sobic007G090415 Sobic007G090415 Sobic005G141000--Sobic007G090415 Sobic005G190800 Sobic005G190800 Sobic005G141000--Sobic005G190800 Sobic005G141000--Sobic005G218201 Sobic005G141000--Sobic008G130700 Sobic002G065400--Sobic005G141000 Sobic002G065400--Sobic001G229500 Sobic002G065400--Sobic005G020200 Sobic002G065400--Sobic005G218201 Sobic002G065400--Sobic005G218400 Sobic002G065400--Sobic005G190800 Sobic002G065400--Sobic005G200600 Sobic004G249400 Sobic004G249400 Sobic002G065400--Sobic004G249400 Sobic002G065400--Sobic005G218600 Sobic005G218600--Sobic005G218201 Sobic005G218600--Sobic004G038300 Sobic005G218600--Sobic001G255300 Sobic001G379300 Sobic001G379300 Sobic005G218600--Sobic001G379300 Sobic005G218600--Sobic006G238100 Sobic005G218600--Sobic004G044200 Sobic005G218600--Sobic002G209800 Sobic008G163200 Sobic008G163200 Sobic005G218600--Sobic008G163200 Sobic003G068300 Sobic003G068300 Sobic005G218600--Sobic003G068300 Sobic008G130700--Sobic007G090415 Sobic008G130700--Sobic002G190100 Sobic006G025700 Sobic006G025700 Sobic008G130700--Sobic006G025700 Sobic003G157500 Sobic003G157500 Sobic008G130700--Sobic003G157500 Sobic003G176200 Sobic003G176200 Sobic008G130700--Sobic003G176200 Sobic008G130700--Sobic005G020200 Sobic008G130700--Sobic005G141000 Sobic008G008500 Sobic008G008500 Sobic008G130700--Sobic008G008500 Sobic001G215300 Sobic001G215300 Sobic008G130700--Sobic001G215300 Sobic004G253800--Sobic005G200600 Sobic004G253800--Sobic003G157500 Sobic004G253800--Sobic005G020200 Sobic001G188600 Sobic001G188600 Sobic004G253800--Sobic001G188600 Sobic004G253800--Sobic006G025700 Sobic009G059100 Sobic009G059100 Sobic004G253800--Sobic009G059100 Sobic009G001500 Sobic009G001500 Sobic004G253800--Sobic009G001500 Sobic001G357200 Sobic001G357200 Sobic004G253800--Sobic001G357200 Sobic006G114300 Sobic006G114300 Sobic004G253800--Sobic006G114300 Sobic002G190100--Sobic006G025700 Sobic002G190100--Sobic006G263800 Sobic002G190100--Sobic008G130700 Sobic002G242600 Sobic002G242600 Sobic002G190100--Sobic002G242600 Sobic001G027600 Sobic001G027600 Sobic002G190100--Sobic001G027600 Sobic004G044000 Sobic004G044000 Sobic002G190100--Sobic004G044000 Sobic002G190100--Sobic004G253800 Sobic002G190100--Sobic009G059100 Sobic002G190100--Sobic001G120000 Sobic004G214400 Sobic004G214400 Sobic006G281066--Sobic004G214400 Sobic001G104300 Sobic001G104300 Sobic006G281066--Sobic001G104300 Sobic001G543700 Sobic001G543700 Sobic006G281066--Sobic001G543700 Sobic002G363500 Sobic002G363500 Sobic006G281066--Sobic002G363500 Sobic001G395300 Sobic001G395300 Sobic006G281066--Sobic001G395300 Sobic003G236300 Sobic003G236300 Sobic006G281066--Sobic003G236300 Sobic006G281066--Sobic010G027200 Sobic006G281066--Sobic002G140000 Sobic001G321400 Sobic001G321400 Sobic006G281066--Sobic001G321400
Octagon: transcription factors


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