Gene annotation
Transcriptome id Sobic.003G418100.1
Synonym KUP3, Sb03g045180, ATKT4, ATKUP3
Functional annotation potassium transporter, putative, expressed
UniProt C5XH54
Pfam PF02705
Panther DB PTHR30540 PTHR30540:SF9
NCBI CDD -
KEGG Orthology K03549; KUP system potassium uptake protein
Gene Ontology GO:0016020; membrane GO:0015079potassium ion transmembrane transporter activity


Orthologs (automatic annotation)
TAIR AT3G02050 : K+ uptake transporter 3
RAP-DB (Rice) LOC_Os01g70940.1 : potassium transporter, putative, expressed
MaizeGDB (Corn) Zm00025a026103 , Zm00025a039183
Brachypodium KQK11412 , KQK11413
Barley HORVU3Hr1G096860.30 , HORVU3Hr1G098670.3 , HORVU3Hr1G098670.2 , HORVU3Hr1G098670.9 , HORVU3Hr1G098670.7 , HORVU3Hr1G098670.6 , HORVU3Hr1G098670.5 , HORVU3Hr1G098670.4 , HORVU3Hr1G098670.1 , HORVU3Hr1G098670.8 , HORVU3Hr1G098670.16 , HORVU3Hr1G098670.15 , HORVU3Hr1G098670.13 , HORVU3Hr1G098670.12 , HORVU3Hr1G098670.11 , HORVU3Hr1G098670.10 , HORVU3Hr1G098670.14 , HORVU3Hr1G096860.4 , HORVU3Hr1G096860.5 , HORVU3Hr1G096860.6 , HORVU3Hr1G096860.1 , HORVU3Hr1G096860.2 , HORVU3Hr1G096860.8 , HORVU3Hr1G096860.9 , HORVU3Hr1G096860.17 , HORVU3Hr1G096860.14 , HORVU3Hr1G096860.12 , HORVU3Hr1G096860.10 , HORVU3Hr1G096860.11 , HORVU3Hr1G096860.18 , HORVU3Hr1G096860.29 , HORVU3Hr1G096860.28 , HORVU3Hr1G096860.27 , HORVU3Hr1G096860.26 , HORVU3Hr1G096860.25 , HORVU3Hr1G096860.24 , HORVU3Hr1G096860.23 , HORVU3Hr1G096860.22 , HORVU3Hr1G096860.20 , HORVU3Hr1G096860.16 , HORVU3Hr1G096860.15 , HORVU3Hr1G096860.13
Wheat TraesCS3D02G439200 , TraesCS3D02G439200 , TraesCS3A02G446600 , TraesCS3A02G446600 , TraesCS3D02G450800 , TraesCS3B02G498200 , TraesCS3A02G458000 , TraesCS3B02G481800 , TraesCS3B02G481800
Populus -


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cDNA sequences
Sobic.003G418100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G064100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -
2 Sobic.010G205100 Sucrose phosphate synthase genes(PubMedID : 24456189)@sucrose phosphate synthase(PubMedID : 26616172)@Sugar synthesis(PubMedID : 27330561)@sucrose-phosphate synthase, putative, expressed K00696: sucrose-phosphate synthase
3 Sobic.001G305600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aminotransferase domain containing protein, putative, expressed K00826: E2.6.1.42, branched-chain amino acid aminotransferase
4 Sobic.008G001900 mitochondrial substrate carrier family protein, putative, expressed -
5 Sobic.002G305000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@small G protein family protein, putative, expressed -
6 Sobic.003G011300 expressed protein K12617: PATL1, DNA topoisomerase 2-associated protein PAT1
7 Sobic.001G531500 peroxisomal biogenesis factor 11, putative, expressed -
8 Sobic.003G354600 csAtPR5, putative, expressed -
9 Sobic.001G073900 lactate/malate dehydrogenase, putative, expressed K00026: malate dehydrogenase
10 Sobic.001G355800 methyltransferase, putative, expressed -
11 Sobic.008G051300 acyl-CoA synthetase protein, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
12 Sobic.005G082200 ACT domain containing protein, expressed K01653: E2.2.1.6S, ilvH, acetolactate synthase I/III small subunit
13 Sobic.003G392900 ABC1 family domain containing protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
14 Sobic.007G201500 rabGAP/TBC domain-containing protein, putative, expressed K18469: TBC1 domain family member 5
15 Sobic.010G236300 "domain confirmed by Pfam database, expressed in root, expression induced BR treatment"(PubMedID : 20499123)@auxin response factor 18, putative, expressed -
16 Sobic.009G129100 preprotein translocase subunit secY, putative, expressed -
17 Sobic.002G359400 transporter-related, putative, expressed K15285: solute carrier family 35, member E3
18 Sobic.007G029700 BTBN17 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
19 Sobic.010G085100 geminivirus Rep-interacting motor protein, putative, expressed -
20 Sobic.002G193800 transporter family protein, putative, expressed -


Gene co-expression network
sample Sobic003G418100 Sobic003G418100 Sobic006G064100 Sobic006G064100 Sobic003G418100--Sobic006G064100 Sobic010G205100 Sobic010G205100 Sobic003G418100--Sobic010G205100 Sobic001G305600 Sobic001G305600 Sobic003G418100--Sobic001G305600 Sobic008G001900 Sobic008G001900 Sobic003G418100--Sobic008G001900 Sobic002G305000 Sobic002G305000 Sobic003G418100--Sobic002G305000 Sobic003G011300 Sobic003G011300 Sobic003G418100--Sobic003G011300 Sobic001G531500 Sobic001G531500 Sobic003G418100--Sobic001G531500 Sobic003G354600 Sobic003G354600 Sobic003G418100--Sobic003G354600 Sobic001G073900 Sobic001G073900 Sobic003G418100--Sobic001G073900 Sobic006G064100--Sobic010G205100 Sobic006G064100--Sobic001G531500 Sobic002G403600 Sobic002G403600 Sobic006G064100--Sobic002G403600 Sobic006G064100--Sobic001G073900 Sobic006G120500 Sobic006G120500 Sobic006G064100--Sobic006G120500 Sobic004G317500 Sobic004G317500 Sobic006G064100--Sobic004G317500 Sobic006G064100--Sobic001G305600 Sobic003G036200 Sobic003G036200 Sobic006G064100--Sobic003G036200 Sobic010G085100 Sobic010G085100 Sobic006G064100--Sobic010G085100 Sobic010G205100--Sobic006G064100 Sobic010G205100--Sobic010G085100 Sobic010G205100--Sobic001G531500 Sobic010G205100--Sobic001G073900 Sobic009G038900 Sobic009G038900 Sobic010G205100--Sobic009G038900 Sobic010G205100--Sobic003G036200 Sobic005G101200 Sobic005G101200 Sobic010G205100--Sobic005G101200 Sobic002G404800 Sobic002G404800 Sobic010G205100--Sobic002G404800 Sobic003G332700 Sobic003G332700 Sobic010G205100--Sobic003G332700 Sobic004G347800 Sobic004G347800 Sobic001G305600--Sobic004G347800 Sobic005G045000 Sobic005G045000 Sobic001G305600--Sobic005G045000 Sobic001G305600--Sobic006G064100 Sobic002G273300 Sobic002G273300 Sobic001G305600--Sobic002G273300 Sobic001G484400 Sobic001G484400 Sobic001G305600--Sobic001G484400 Sobic008G168300 Sobic008G168300 Sobic001G305600--Sobic008G168300 Sobic001G305600--Sobic001G531500 Sobic001G305600--Sobic003G418100 Sobic010G176200 Sobic010G176200 Sobic001G305600--Sobic010G176200 Sobic005G001700 Sobic005G001700 Sobic008G001900--Sobic005G001700 Sobic008G001900--Sobic001G073900 Sobic004G235600 Sobic004G235600 Sobic008G001900--Sobic004G235600 Sobic003G085100 Sobic003G085100 Sobic008G001900--Sobic003G085100 Sobic008G001900--Sobic003G332700 Sobic004G054400 Sobic004G054400 Sobic008G001900--Sobic004G054400 Sobic005G063000 Sobic005G063000 Sobic008G001900--Sobic005G063000 Sobic005G204200 Sobic005G204200 Sobic008G001900--Sobic005G204200 Sobic001G465700 Sobic001G465700 Sobic008G001900--Sobic001G465700 Sobic002G359400 Sobic002G359400 Sobic002G305000--Sobic002G359400 Sobic009G201300 Sobic009G201300 Sobic002G305000--Sobic009G201300 Sobic002G305000--Sobic003G354600 Sobic010G147100 Sobic010G147100 Sobic002G305000--Sobic010G147100 Sobic001G355800 Sobic001G355800 Sobic002G305000--Sobic001G355800 Sobic006G175800 Sobic006G175800 Sobic002G305000--Sobic006G175800 Sobic001G303100 Sobic001G303100 Sobic002G305000--Sobic001G303100 Sobic010G074300 Sobic010G074300 Sobic002G305000--Sobic010G074300 Sobic003G220800 Sobic003G220800 Sobic002G305000--Sobic003G220800 Sobic004G134200 Sobic004G134200 Sobic003G011300--Sobic004G134200 Sobic001G374100 Sobic001G374100 Sobic003G011300--Sobic001G374100 Sobic007G116200 Sobic007G116200 Sobic003G011300--Sobic007G116200 Sobic010G032900 Sobic010G032900 Sobic003G011300--Sobic010G032900 Sobic004G042200 Sobic004G042200 Sobic003G011300--Sobic004G042200 Sobic005G059800 Sobic005G059800 Sobic003G011300--Sobic005G059800 Sobic001G002000 Sobic001G002000 Sobic003G011300--Sobic001G002000 Sobic003G168100 Sobic003G168100 Sobic003G011300--Sobic003G168100 Sobic010G126000 Sobic010G126000 Sobic003G011300--Sobic010G126000 Sobic002G118200 Sobic002G118200 Sobic001G531500--Sobic002G118200 Sobic001G531500--Sobic006G064100 Sobic001G531500--Sobic002G403600 Sobic001G531500--Sobic001G073900 Sobic001G531500--Sobic010G205100 Sobic009G123900 Sobic009G123900 Sobic001G531500--Sobic009G123900 Sobic001G531500--Sobic005G001700 Sobic001G531500--Sobic008G001900 Sobic001G531500--Sobic003G332700 Sobic001G136800 Sobic001G136800 Sobic003G354600--Sobic001G136800 Sobic003G119600 Sobic003G119600 Sobic003G354600--Sobic003G119600 Sobic003G354600--Sobic002G305000 Sobic004G054100 Sobic004G054100 Sobic003G354600--Sobic004G054100 Sobic003G354600--Sobic001G355800 Sobic010G210500 Sobic010G210500 Sobic003G354600--Sobic010G210500 Sobic003G354600--Sobic009G201300 Sobic002G181600 Sobic002G181600 Sobic003G354600--Sobic002G181600 Sobic003G354600--Sobic003G220800 Sobic001G073900--Sobic003G332700 Sobic001G073900--Sobic008G001900 Sobic008G117000 Sobic008G117000 Sobic001G073900--Sobic008G117000 Sobic003G342100 Sobic003G342100 Sobic001G073900--Sobic003G342100 Sobic001G065600 Sobic001G065600 Sobic001G073900--Sobic001G065600 Sobic001G073900--Sobic001G531500 Sobic001G073900--Sobic005G001700 Sobic001G073900--Sobic004G235600 Sobic002G049600 Sobic002G049600 Sobic001G073900--Sobic002G049600
Octagon: transcription factors


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