Gene annotation
Transcriptome id Sobic.003G077700.2,Sobic.003G077700.1
Synonym RUS5, Sb03g006560
Functional annotation DUF647 domain containing protein, putative, expressed
UniProt A0A1B6Q1Y2 , A0A1W0VW36
Pfam PF04884
Panther DB PTHR12770 PTHR12770:SF24
NCBI CDD KOG4249; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G01510 : Protein of unknown function, DUF647
RAP-DB (Rice) LOC_Os01g04860.1 : DUF647 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a023507
Brachypodium KQK02624 , KQK02623 , KQK02622
Barley -
Wheat TraesCS3B02G066100 , TraesCS3D02G054100 , TraesCS3D02G054100 , TraesCS3D02G054100 , TraesCS3B02G066100 , TraesCS3B02G066100 , TraesCS3A02G054800
Populus -


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cDNA sequences
Sobic.003G077700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G337400 ELMO/CED-12 family protein, putative, expressed -
2 Sobic.001G516901 - -
3 Sobic.005G231100 alpha-hemolysin, putative, expressed K08998: uncharacterized protein
4 Sobic.005G084500 uncharacterized protein yqxC, putative, expressed K06442: 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase
5 Sobic.001G378100 relA-SpoT like protein RSH1, putative, expressed -
6 Sobic.003G233700 SET domain-containing protein, putative, expressed -
7 Sobic.001G500600 pseudouridine synthase family protein, putative, expressed -
8 Sobic.002G347600 pentatricopeptide containing protein, putative, expressed -
9 Sobic.003G301300 PPR repeat domain containing protein, putative, expressed -
10 Sobic.006G197300 expressed protein -
11 Sobic.007G103400 expressed protein -
12 Sobic.001G530900 expressed protein -
13 Sobic.006G232600 amine oxidase, flavin-containing, domain containing protein, expressed K02293: PDS, 15-cis-phytoene desaturase
14 Sobic.007G185700 CRS2-associated factor 1, chloroplast precursor, putative, expressed -
15 Sobic.010G171600 STE_MEKK_ste11_MAP3K.12 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K04733: interleukin-1 receptor-associated kinase 4
16 Sobic.007G005400 chaperone protein dnaJ, putative, expressed K03686: molecular chaperone DnaJ
17 Sobic.001G126300 adenylosuccinate synthetase, chloroplast precursor, putative, expressed K01939: purA, adenylosuccinate synthase
18 Sobic.004G238200 arsenical pump-driving ATPase, putative, expressed K01551: arsA, ASNA1, arsenite/tail-anchored protein-transporting ATPase
19 Sobic.003G264800 expressed protein -
20 Sobic.007G136200 expressed protein -


Gene co-expression network
sample Sobic003G077700 Sobic003G077700 Sobic004G337400 Sobic004G337400 Sobic003G077700--Sobic004G337400 Sobic001G516901 Sobic001G516901 Sobic003G077700--Sobic001G516901 Sobic005G231100 Sobic005G231100 Sobic003G077700--Sobic005G231100 Sobic005G084500 Sobic005G084500 Sobic003G077700--Sobic005G084500 Sobic001G378100 Sobic001G378100 Sobic003G077700--Sobic001G378100 Sobic003G233700 Sobic003G233700 Sobic003G077700--Sobic003G233700 Sobic001G500600 Sobic001G500600 Sobic003G077700--Sobic001G500600 Sobic002G347600 Sobic002G347600 Sobic003G077700--Sobic002G347600 Sobic003G301300 Sobic003G301300 Sobic003G077700--Sobic003G301300 Sobic007G136200 Sobic007G136200 Sobic004G337400--Sobic007G136200 Sobic004G337400--Sobic001G378100 Sobic006G232600 Sobic006G232600 Sobic004G337400--Sobic006G232600 Sobic004G019800 Sobic004G019800 Sobic004G337400--Sobic004G019800 Sobic004G337400--Sobic003G077700 Sobic010G002700 Sobic010G002700 Sobic004G337400--Sobic010G002700 Sobic005G106600 Sobic005G106600 Sobic004G337400--Sobic005G106600 Sobic004G337400--Sobic005G084500 Sobic010G043800 Sobic010G043800 Sobic004G337400--Sobic010G043800 Sobic001G516901--Sobic001G500600 Sobic006G197300 Sobic006G197300 Sobic001G516901--Sobic006G197300 Sobic004G336200 Sobic004G336200 Sobic001G516901--Sobic004G336200 Sobic002G043600 Sobic002G043600 Sobic001G516901--Sobic002G043600 Sobic009G024300 Sobic009G024300 Sobic001G516901--Sobic009G024300 Sobic010G035400 Sobic010G035400 Sobic001G516901--Sobic010G035400 Sobic004G238200 Sobic004G238200 Sobic001G516901--Sobic004G238200 Sobic002G258600 Sobic002G258600 Sobic001G516901--Sobic002G258600 Sobic003G160800 Sobic003G160800 Sobic001G516901--Sobic003G160800 Sobic005G231100--Sobic001G500600 Sobic003G085100 Sobic003G085100 Sobic005G231100--Sobic003G085100 Sobic009G148500 Sobic009G148500 Sobic005G231100--Sobic009G148500 Sobic005G231100--Sobic001G516901 Sobic003G232700 Sobic003G232700 Sobic005G231100--Sobic003G232700 Sobic005G231100--Sobic004G238200 Sobic007G005400 Sobic007G005400 Sobic005G231100--Sobic007G005400 Sobic005G231100--Sobic002G043600 Sobic003G234900 Sobic003G234900 Sobic005G231100--Sobic003G234900 Sobic005G084500--Sobic007G005400 Sobic002G118200 Sobic002G118200 Sobic005G084500--Sobic002G118200 Sobic005G084500--Sobic004G238200 Sobic005G084500--Sobic004G337400 Sobic006G219600 Sobic006G219600 Sobic005G084500--Sobic006G219600 Sobic005G084500--Sobic004G019800 Sobic004G163800 Sobic004G163800 Sobic005G084500--Sobic004G163800 Sobic001G530900 Sobic001G530900 Sobic005G084500--Sobic001G530900 Sobic005G084500--Sobic001G516901 Sobic003G073800 Sobic003G073800 Sobic001G378100--Sobic003G073800 Sobic001G217900 Sobic001G217900 Sobic001G378100--Sobic001G217900 Sobic001G504400 Sobic001G504400 Sobic001G378100--Sobic001G504400 Sobic001G077300 Sobic001G077300 Sobic001G378100--Sobic001G077300 Sobic001G540600 Sobic001G540600 Sobic001G378100--Sobic001G540600 Sobic001G536700 Sobic001G536700 Sobic001G378100--Sobic001G536700 Sobic001G378100--Sobic006G232600 Sobic009G170200 Sobic009G170200 Sobic001G378100--Sobic009G170200 Sobic001G258200 Sobic001G258200 Sobic001G378100--Sobic001G258200 Sobic007G103400 Sobic007G103400 Sobic003G233700--Sobic007G103400 Sobic003G287900 Sobic003G287900 Sobic003G233700--Sobic003G287900 Sobic004G353100 Sobic004G353100 Sobic003G233700--Sobic004G353100 Sobic002G133900 Sobic002G133900 Sobic003G233700--Sobic002G133900 Sobic009G237000 Sobic009G237000 Sobic003G233700--Sobic009G237000 Sobic003G233700--Sobic003G160800 Sobic008G074000 Sobic008G074000 Sobic003G233700--Sobic008G074000 Sobic003G094350 Sobic003G094350 Sobic003G233700--Sobic003G094350 Sobic003G233700--Sobic001G500600 Sobic001G500600--Sobic003G094350 Sobic001G500600--Sobic004G336200 Sobic001G500600--Sobic006G197300 Sobic003G070900 Sobic003G070900 Sobic001G500600--Sobic003G070900 Sobic003G141100 Sobic003G141100 Sobic001G500600--Sobic003G141100 Sobic001G500600--Sobic003G232700 Sobic001G500600--Sobic003G287900 Sobic001G500600--Sobic002G133900 Sobic003G372900 Sobic003G372900 Sobic001G500600--Sobic003G372900 Sobic006G038500 Sobic006G038500 Sobic002G347600--Sobic006G038500 Sobic002G347600--Sobic003G301300 Sobic002G347600--Sobic004G336200 Sobic008G091400 Sobic008G091400 Sobic002G347600--Sobic008G091400 Sobic006G128300 Sobic006G128300 Sobic002G347600--Sobic006G128300 Sobic003G247400 Sobic003G247400 Sobic002G347600--Sobic003G247400 Sobic002G347600--Sobic003G141100 Sobic004G328400 Sobic004G328400 Sobic002G347600--Sobic004G328400 Sobic009G121000 Sobic009G121000 Sobic002G347600--Sobic009G121000 Sobic008G073100 Sobic008G073100 Sobic003G301300--Sobic008G073100 Sobic003G301300--Sobic001G500600 Sobic003G301300--Sobic004G336200 Sobic003G301300--Sobic010G035400 Sobic003G301300--Sobic003G160800 Sobic005G110400 Sobic005G110400 Sobic003G301300--Sobic005G110400 Sobic002G406700 Sobic002G406700 Sobic003G301300--Sobic002G406700 Sobic003G301300--Sobic003G232700 Sobic001G126300 Sobic001G126300 Sobic003G301300--Sobic001G126300
Octagon: transcription factors


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