Gene annotation
Transcriptome id Sobic.002G406700.1,Sobic.002G406700.2
Synonym Sb02g042070
Functional annotation tyrosine-specific transport protein, putative, expressed
UniProt C5X4T6 , A0A1W0W7Q2
Pfam PF03222
Panther DB PTHR32195 PTHR32195:SF20
NCBI CDD -
KEGG Orthology K03834; tyrosine-specific transport protein
Gene Ontology GO:0003333; amino acid transmembrane transport


Orthologs (automatic annotation)
TAIR AT5G19500 : Tryptophan/tyrosine permease
RAP-DB (Rice) LOC_Os07g46780.1 : tyrosine-specific transport protein, putative, expressed
MaizeGDB (Corn) Zm00025a049054
Brachypodium KQK14800 , KQK14801 , KQK14798 , KQK14799
Barley HORVU2Hr1G021870.23 , HORVU2Hr1G021870.22 , HORVU2Hr1G021870.21 , HORVU2Hr1G021870.20 , HORVU2Hr1G021870.27 , HORVU2Hr1G021870.26 , HORVU2Hr1G021870.25 , HORVU2Hr1G021870.24 , HORVU2Hr1G021870.29 , HORVU2Hr1G021870.28 , HORVU2Hr1G021870.30 , HORVU2Hr1G021870.31 , HORVU2Hr1G021870.32 , HORVU2Hr1G021870.34 , HORVU2Hr1G021870.1 , HORVU2Hr1G021870.6 , HORVU2Hr1G021870.7 , HORVU2Hr1G021870.9 , HORVU2Hr1G021870.2 , HORVU2Hr1G021870.18 , HORVU2Hr1G021870.19 , HORVU2Hr1G021870.12 , HORVU2Hr1G021870.13 , HORVU2Hr1G021870.10 , HORVU2Hr1G021870.11 , HORVU2Hr1G021870.16 , HORVU2Hr1G021870.17 , HORVU2Hr1G021870.14 , HORVU2Hr1G021870.15 , HORVU2Hr1G021870.3 , HORVU2Hr1G021870.4 , HORVU2Hr1G021870.5 , HORVU2Hr1G021870.8
Wheat TraesCS2D02G126700 , TraesCS2A02G123900 , TraesCS2B02G145800
Populus -


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cDNA sequences
Sobic.002G406700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G336200 OsClp6 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
2 Sobic.008G073100 uncharacterized protein ycf45, putative, expressed -
3 Sobic.003G151500 CRS2-associated factor 2, chloroplast precursor, putative, expressed -
4 Sobic.003G372900 deoxynucleoside kinase family, putative, expressed -
5 Sobic.002G272100 expressed protein -
6 Sobic.003G094350 - K01869: LARS, leucyl-tRNA synthetase
7 Sobic.003G301300 PPR repeat domain containing protein, putative, expressed -
8 Sobic.009G148500 GTPase of unknown function domain containing protein, putative, expressed -
9 Sobic.003G077400 peptidase M50 family protein, putative, expressed -
10 Sobic.002G401800 bifunctional thioredoxin reductase/thioredoxin, putative, expressed K00384: trxB, thioredoxin reductase (NADPH)
11 Sobic.010G035400 expressed protein -
12 Sobic.008G039600 signal recognition particle 54 kDa protein, putative, expressed K03106: SRP54, signal recognition particle subunit SRP54
13 Sobic.005G110400 pentatricopeptide repeat protein PPR986-12, putative, expressed -
14 Sobic.001G500600 pseudouridine synthase family protein, putative, expressed -
15 Sobic.001G083100 Unnamed(PubMedID : 24676859)@WRKY4, expressed -
16 Sobic.009G175500 acetyltransferase, GNAT family, putative, expressed -
17 Sobic.003G387100 membrane-associated 30 kDa protein, chloroplast precursor, putative, expressed K03969: phage shock protein A
18 Sobic.002G405100 elongation factor TS family protein, expressed K02357: tsf, elongation factor Ts
19 Sobic.005G143500 aspartyl/glutamyl-tRNA amidotransferase subunit B, putative, expressed K02434: gatB, aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B
20 Sobic.001G134700 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed K02639: ferredoxin


Gene co-expression network
sample Sobic002G406700 Sobic002G406700 Sobic004G336200 Sobic004G336200 Sobic002G406700--Sobic004G336200 Sobic008G073100 Sobic008G073100 Sobic002G406700--Sobic008G073100 Sobic003G151500 Sobic003G151500 Sobic002G406700--Sobic003G151500 Sobic003G372900 Sobic003G372900 Sobic002G406700--Sobic003G372900 Sobic002G272100 Sobic002G272100 Sobic002G406700--Sobic002G272100 Sobic003G094350 Sobic003G094350 Sobic002G406700--Sobic003G094350 Sobic003G301300 Sobic003G301300 Sobic002G406700--Sobic003G301300 Sobic009G148500 Sobic009G148500 Sobic002G406700--Sobic009G148500 Sobic003G077400 Sobic003G077400 Sobic002G406700--Sobic003G077400 Sobic002G401800 Sobic002G401800 Sobic004G336200--Sobic002G401800 Sobic010G035400 Sobic010G035400 Sobic004G336200--Sobic010G035400 Sobic001G500600 Sobic001G500600 Sobic004G336200--Sobic001G500600 Sobic003G387100 Sobic003G387100 Sobic004G336200--Sobic003G387100 Sobic003G160800 Sobic003G160800 Sobic004G336200--Sobic003G160800 Sobic004G336200--Sobic008G073100 Sobic001G134700 Sobic001G134700 Sobic004G336200--Sobic001G134700 Sobic005G110400 Sobic005G110400 Sobic004G336200--Sobic005G110400 Sobic006G197300 Sobic006G197300 Sobic004G336200--Sobic006G197300 Sobic008G073100--Sobic005G110400 Sobic001G368500 Sobic001G368500 Sobic008G073100--Sobic001G368500 Sobic008G073100--Sobic002G401800 Sobic008G073100--Sobic003G387100 Sobic008G073100--Sobic004G336200 Sobic001G309300 Sobic001G309300 Sobic008G073100--Sobic001G309300 Sobic008G073100--Sobic003G077400 Sobic008G073100--Sobic002G272100 Sobic006G106400 Sobic006G106400 Sobic008G073100--Sobic006G106400 Sobic003G151500--Sobic009G148500 Sobic003G151500--Sobic002G406700 Sobic003G432500 Sobic003G432500 Sobic003G151500--Sobic003G432500 Sobic003G151500--Sobic004G336200 Sobic001G126300 Sobic001G126300 Sobic003G151500--Sobic001G126300 Sobic003G151500--Sobic005G110400 Sobic001G083100 Sobic001G083100 Sobic003G151500--Sobic001G083100 Sobic003G151500--Sobic003G372900 Sobic003G151500--Sobic008G073100 Sobic003G372900--Sobic001G500600 Sobic001G054100 Sobic001G054100 Sobic003G372900--Sobic001G054100 Sobic003G372900--Sobic001G083100 Sobic003G372900--Sobic002G406700 Sobic003G141100 Sobic003G141100 Sobic003G372900--Sobic003G141100 Sobic003G372900--Sobic003G094350 Sobic003G372900--Sobic004G336200 Sobic004G333400 Sobic004G333400 Sobic003G372900--Sobic004G333400 Sobic006G280800 Sobic006G280800 Sobic003G372900--Sobic006G280800 Sobic002G272100--Sobic002G401800 Sobic002G272100--Sobic008G073100 Sobic002G272100--Sobic001G368500 Sobic008G050400 Sobic008G050400 Sobic002G272100--Sobic008G050400 Sobic008G039600 Sobic008G039600 Sobic002G272100--Sobic008G039600 Sobic002G351600 Sobic002G351600 Sobic002G272100--Sobic002G351600 Sobic002G267900 Sobic002G267900 Sobic002G272100--Sobic002G267900 Sobic002G272100--Sobic001G083100 Sobic002G272100--Sobic005G110400 Sobic002G133900 Sobic002G133900 Sobic003G094350--Sobic002G133900 Sobic003G070900 Sobic003G070900 Sobic003G094350--Sobic003G070900 Sobic003G094350--Sobic001G500600 Sobic003G287900 Sobic003G287900 Sobic003G094350--Sobic003G287900 Sobic005G100300 Sobic005G100300 Sobic003G094350--Sobic005G100300 Sobic002G028400 Sobic002G028400 Sobic003G094350--Sobic002G028400 Sobic003G094350--Sobic004G336200 Sobic010G002000 Sobic010G002000 Sobic003G094350--Sobic010G002000 Sobic004G353100 Sobic004G353100 Sobic003G094350--Sobic004G353100 Sobic003G301300--Sobic008G073100 Sobic003G301300--Sobic001G500600 Sobic003G301300--Sobic004G336200 Sobic003G301300--Sobic010G035400 Sobic003G301300--Sobic003G160800 Sobic003G301300--Sobic005G110400 Sobic003G301300--Sobic002G406700 Sobic003G232700 Sobic003G232700 Sobic003G301300--Sobic003G232700 Sobic003G301300--Sobic001G126300 Sobic009G148500--Sobic001G083100 Sobic009G148500--Sobic003G151500 Sobic009G148500--Sobic008G073100 Sobic006G055800 Sobic006G055800 Sobic009G148500--Sobic006G055800 Sobic009G148500--Sobic001G126300 Sobic004G011300 Sobic004G011300 Sobic009G148500--Sobic004G011300 Sobic005G002900 Sobic005G002900 Sobic009G148500--Sobic005G002900 Sobic009G148500--Sobic005G110400 Sobic009G148500--Sobic001G500600 Sobic001G469933 Sobic001G469933 Sobic003G077400--Sobic001G469933 Sobic003G077400--Sobic008G073100 Sobic003G077400--Sobic005G110400 Sobic004G012900 Sobic004G012900 Sobic003G077400--Sobic004G012900 Sobic003G077400--Sobic001G368500 Sobic003G077400--Sobic002G401800 Sobic003G077400--Sobic003G387100 Sobic003G077400--Sobic003G160800 Sobic003G077400--Sobic004G336200
Octagon: transcription factors


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