Gene annotation
Transcriptome id Sobic.002G193600.1
Synonym Sb02g024050, AtGH9B8, GH9B8
Functional annotation endoglucanase, putative, expressed
UniProt C5XC34
Pfam PF00759
Panther DB PTHR22298 PTHR22298:SF43
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT2G32990 : glycosyl hydrolase 9B8
RAP-DB (Rice) LOC_Os09g23084.1 : endoglucanase, putative, expressed
MaizeGDB (Corn) Zm00025a019006 , Zm00025a021973 , Zm00025a032681 , Zm00025a013859 , Zm00025a049387 , Zm00025a018779 , Zm00025a046876
Brachypodium KQJ93361 , KQJ98284 , KQK02009 , PNT76125 , KQJ90132
Barley HORVU6Hr1G077010.1 , HORVU6Hr1G077010.3 , HORVU6Hr1G077010.2 , HORVU6Hr1G077010.5 , HORVU6Hr1G077010.4 , HORVU6Hr1G077010.7 , HORVU6Hr1G077010.6 , HORVU6Hr1G077010.9 , HORVU6Hr1G077010.8 , HORVU6Hr1G022270.9 , HORVU1Hr1G085830.1 , HORVU6Hr1G022270.8 , HORVU1Hr1G085830.6 , HORVU6Hr1G077010.20 , HORVU6Hr1G077010.21 , HORVU6Hr1G077010.22 , HORVU5Hr1G060140.5 , HORVU5Hr1G060140.7 , HORVU5Hr1G060140.1 , HORVU5Hr1G060140.8 , HORVU5Hr1G060140.9 , HORVU1Hr1G085830.2 , HORVU5Hr1G098710.1 , HORVU7Hr1G040680.6 , HORVU7Hr1G040680.5 , HORVU7Hr1G040680.4 , HORVU7Hr1G040680.3 , HORVU7Hr1G040680.2 , HORVU1Hr1G085830.5 , HORVU6Hr1G077010.15 , HORVU6Hr1G077010.14 , HORVU6Hr1G077010.17 , HORVU6Hr1G077010.16 , HORVU6Hr1G077010.11 , HORVU6Hr1G077010.10 , HORVU6Hr1G077010.13 , HORVU6Hr1G077010.12 , HORVU6Hr1G077010.19 , HORVU6Hr1G077010.18 , HORVU7Hr1G040720.1 , HORVU5Hr1G060140.12 , HORVU5Hr1G060140.13 , HORVU5Hr1G060140.10 , HORVU5Hr1G060140.11 , HORVU1Hr1G085830.3 , HORVU7Hr1G029660.1 , HORVU7Hr1G029660.2 , HORVU7Hr1G029660.3 , HORVU6Hr1G022270.7 , HORVU6Hr1G022270.6 , HORVU6Hr1G022270.5 , HORVU6Hr1G022270.4 , HORVU6Hr1G022270.3 , HORVU6Hr1G022270.2 , HORVU6Hr1G022270.1 , HORVU1Hr1G085830.4 , HORVU1Hr1G085830.7 , HORVU1Hr1G079980.15 , HORVU1Hr1G079980.16 , HORVU1Hr1G079980.11 , HORVU3Hr1G029470.1 , HORVU3Hr1G029470.3 , HORVU3Hr1G029470.2 , HORVU3Hr1G029470.5 , HORVU3Hr1G029470.4 , HORVU3Hr1G029470.7 , HORVU3Hr1G029470.6 , HORVU3Hr1G029470.9 , HORVU3Hr1G029470.8 , HORVU7Hr1G029680.4 , HORVU7Hr1G029680.2 , HORVU7Hr1G029680.3 , HORVU7Hr1G029680.1 , HORVU6Hr1G073570.2 , HORVU6Hr1G073570.3 , HORVU6Hr1G073570.1 , HORVU6Hr1G073570.4 , HORVU6Hr1G073570.5 , HORVU6Hr1G022300.1 , HORVU0Hr1G023830.4 , HORVU0Hr1G023830.5 , HORVU0Hr1G023830.6 , HORVU0Hr1G023830.1 , HORVU0Hr1G023830.2 , HORVU0Hr1G023830.3 , HORVU1Hr1G079980.8 , HORVU1Hr1G079980.9 , HORVU1Hr1G079980.6 , HORVU1Hr1G079980.7 , HORVU1Hr1G079980.4 , HORVU1Hr1G079980.5 , HORVU1Hr1G079980.2 , HORVU1Hr1G079980.3 , HORVU7Hr1G040720.2 , HORVU1Hr1G079980.1
Wheat TraesCS1D02G397400 , TraesCS6B02G342600 , TraesCS3D02G153400 , TraesCS6A02G122100 , TraesCS7A02G144500 , TraesCS7D02G146000 , TraesCS6D02G291800 , TraesCS6D02G275900 , TraesCS4B02G104500 , TraesCS6A02G295300 , TraesCS5B02G201100 , TraesCSU02G093600 , TraesCS6B02G150300 , TraesCS7B02G047000 , TraesCS7A02G144700 , TraesCS7B02G104600 , TraesCS5D02G208900 , TraesCS6D02G112100 , TraesCS7A02G197900 , TraesCS5A02G202600 , TraesCS1A02G389300 , TraesCS3A02G144600 , TraesCS6B02G325400 , TraesCS7B02G046900 , TraesCS7A02G144400 , TraesCS7D02G201000 , TraesCS6A02G312400 , TraesCS6A02G312400
Populus -


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cDNA sequences
Sobic.002G193600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G168500 serpin domain containing protein, putative, expressed K13963: serpin B
2 Sobic.005G121200 "similar to HVA22-like protein e, putative, expressed"(PubMedID : 29862293)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@HVA22, putative, expressed K17279: receptor expression-enhancing protein 5/6
3 Sobic.008G029300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@CBS domain containing membrane protein, putative, expressed -
4 Sobic.003G226300 Ceramidase family protein (At)(PubMedID : 27208977)@neutral ceramidase precursor, putative, expressed K12349: neutral ceramidase
5 Sobic.002G173800 hydroxyproline-rich glycoprotein family protein, putative, expressed -
6 Sobic.002G075800 Up-reguralion under drought(PubMedID : 24916767)@uncharacterized glycosyltransferase, putative, expressed K06617: raffinose synthase
7 Sobic.004G203500 actin, putative, expressed K18584: ACTR3, actin-related protein 3
8 Sobic.005G061033 - -
9 Sobic.001G294600 RNA recognition motif containing protein, putative, expressed K14396: PABPN1, polyadenylate-binding protein 2
10 Sobic.005G061000 ABC-2 type transporter domain containing protein, expressed -
11 Sobic.008G087500 Up-reguralion under drought(PubMedID : 24916767)@expressed protein -
12 Sobic.002G075500 CESA8 - cellulose synthase, expressed K10999: cellulose synthase A
13 Sobic.004G295500 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
14 Sobic.004G172100 serine/threonine-protein kinase, putative, expressed -
15 Sobic.001G206300 dof zinc finger domain containing protein, putative, expressed -
16 Sobic.003G129400 glycosyltransferase family 43 protein, putative, expressed K00735: galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1
17 Sobic.004G333100 expressed protein -
18 Sobic.001G418600 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
19 Sobic.006G148700 kinase, pfkB family, putative, expressed K00856: E2.7.1.20, adenosine kinase
20 Sobic.005G224500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@xylanase inhibitor, putative, expressed -


Gene co-expression network
sample Sobic002G193600 Sobic002G193600 Sobic001G168500 Sobic001G168500 Sobic002G193600--Sobic001G168500 Sobic005G121200 Sobic005G121200 Sobic002G193600--Sobic005G121200 Sobic008G029300 Sobic008G029300 Sobic002G193600--Sobic008G029300 Sobic003G226300 Sobic003G226300 Sobic002G193600--Sobic003G226300 Sobic002G173800 Sobic002G173800 Sobic002G193600--Sobic002G173800 Sobic002G075800 Sobic002G075800 Sobic002G193600--Sobic002G075800 Sobic004G203500 Sobic004G203500 Sobic002G193600--Sobic004G203500 Sobic005G061033 Sobic005G061033 Sobic002G193600--Sobic005G061033 Sobic001G294600 Sobic001G294600 Sobic002G193600--Sobic001G294600 Sobic001G168500--Sobic002G193600 Sobic001G168500--Sobic001G294600 Sobic003G252900 Sobic003G252900 Sobic001G168500--Sobic003G252900 Sobic001G168500--Sobic003G226300 Sobic001G168600 Sobic001G168600 Sobic001G168500--Sobic001G168600 Sobic004G264600 Sobic004G264600 Sobic001G168500--Sobic004G264600 Sobic007G225300 Sobic007G225300 Sobic001G168500--Sobic007G225300 Sobic004G172100 Sobic004G172100 Sobic001G168500--Sobic004G172100 Sobic001G480800 Sobic001G480800 Sobic001G168500--Sobic001G480800 Sobic001G127800 Sobic001G127800 Sobic005G121200--Sobic001G127800 Sobic001G460300 Sobic001G460300 Sobic005G121200--Sobic001G460300 Sobic002G337800 Sobic002G337800 Sobic005G121200--Sobic002G337800 Sobic003G278700 Sobic003G278700 Sobic005G121200--Sobic003G278700 Sobic009G030200 Sobic009G030200 Sobic005G121200--Sobic009G030200 Sobic001G396400 Sobic001G396400 Sobic005G121200--Sobic001G396400 Sobic003G198200 Sobic003G198200 Sobic005G121200--Sobic003G198200 Sobic007G152800 Sobic007G152800 Sobic005G121200--Sobic007G152800 Sobic003G198150 Sobic003G198150 Sobic005G121200--Sobic003G198150 Sobic008G029300--Sobic002G075800 Sobic008G029300--Sobic003G198200 Sobic009G161800 Sobic009G161800 Sobic008G029300--Sobic009G161800 Sobic004G170032 Sobic004G170032 Sobic008G029300--Sobic004G170032 Sobic008G029300--Sobic003G198150 Sobic003G378000 Sobic003G378000 Sobic008G029300--Sobic003G378000 Sobic002G148700 Sobic002G148700 Sobic008G029300--Sobic002G148700 Sobic008G029300--Sobic002G193600 Sobic008G029300--Sobic002G173800 Sobic003G226300--Sobic001G168500 Sobic003G226300--Sobic002G193600 Sobic003G226300--Sobic001G294600 Sobic003G226300--Sobic003G252900 Sobic001G401900 Sobic001G401900 Sobic003G226300--Sobic001G401900 Sobic003G226300--Sobic005G121200 Sobic004G108100 Sobic004G108100 Sobic003G226300--Sobic004G108100 Sobic003G222200 Sobic003G222200 Sobic003G226300--Sobic003G222200 Sobic001G452200 Sobic001G452200 Sobic003G226300--Sobic001G452200 Sobic002G173800--Sobic002G075800 Sobic002G110100 Sobic002G110100 Sobic002G173800--Sobic002G110100 Sobic002G173800--Sobic008G029300 Sobic002G173800--Sobic001G460300 Sobic007G180900 Sobic007G180900 Sobic002G173800--Sobic007G180900 Sobic002G173800--Sobic005G121200 Sobic002G173800--Sobic002G193600 Sobic002G118700 Sobic002G118700 Sobic002G173800--Sobic002G118700 Sobic009G072200 Sobic009G072200 Sobic002G173800--Sobic009G072200 Sobic009G136700 Sobic009G136700 Sobic002G075800--Sobic009G136700 Sobic002G075800--Sobic008G029300 Sobic002G075800--Sobic002G173800 Sobic003G356000 Sobic003G356000 Sobic002G075800--Sobic003G356000 Sobic002G075800--Sobic009G161800 Sobic003G131800 Sobic003G131800 Sobic002G075800--Sobic003G131800 Sobic002G164960 Sobic002G164960 Sobic002G075800--Sobic002G164960 Sobic008G087500 Sobic008G087500 Sobic002G075800--Sobic008G087500 Sobic006G183200 Sobic006G183200 Sobic002G075800--Sobic006G183200 Sobic004G295500 Sobic004G295500 Sobic004G203500--Sobic004G295500 Sobic010G054000 Sobic010G054000 Sobic004G203500--Sobic010G054000 Sobic007G203000 Sobic007G203000 Sobic004G203500--Sobic007G203000 Sobic004G203500--Sobic006G183200 Sobic003G205300 Sobic003G205300 Sobic004G203500--Sobic003G205300 Sobic002G388600 Sobic002G388600 Sobic004G203500--Sobic002G388600 Sobic003G240100 Sobic003G240100 Sobic004G203500--Sobic003G240100 Sobic006G193500 Sobic006G193500 Sobic004G203500--Sobic006G193500 Sobic003G410700 Sobic003G410700 Sobic004G203500--Sobic003G410700 Sobic005G061000 Sobic005G061000 Sobic005G061033--Sobic005G061000 Sobic001G237000 Sobic001G237000 Sobic005G061033--Sobic001G237000 Sobic003G197300 Sobic003G197300 Sobic005G061033--Sobic003G197300 Sobic006G119600 Sobic006G119600 Sobic005G061033--Sobic006G119600 Sobic004G256800 Sobic004G256800 Sobic005G061033--Sobic004G256800 Sobic001G206300 Sobic001G206300 Sobic005G061033--Sobic001G206300 Sobic001G502700 Sobic001G502700 Sobic005G061033--Sobic001G502700 Sobic002G225300 Sobic002G225300 Sobic005G061033--Sobic002G225300 Sobic003G224200 Sobic003G224200 Sobic005G061033--Sobic003G224200 Sobic003G358200 Sobic003G358200 Sobic001G294600--Sobic003G358200 Sobic001G294600--Sobic003G252900 Sobic008G058700 Sobic008G058700 Sobic001G294600--Sobic008G058700 Sobic006G107400 Sobic006G107400 Sobic001G294600--Sobic006G107400 Sobic005G084900 Sobic005G084900 Sobic001G294600--Sobic005G084900 Sobic001G067000 Sobic001G067000 Sobic001G294600--Sobic001G067000 Sobic001G294600--Sobic001G168500 Sobic001G379000 Sobic001G379000 Sobic001G294600--Sobic001G379000 Sobic006G164000 Sobic006G164000 Sobic001G294600--Sobic006G164000
Octagon: transcription factors


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