Gene annotation
Transcriptome id Sobic.002G174500.1
Synonym
Functional annotation OsFBX252 - F-box domain containing protein, expressed
UniProt A0A1B6QC02
Pfam -
Panther DB PTHR33207 PTHR33207:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g36870.1 : OsFBX252 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G147466 - -
2 Sobic.004G322901 - -
3 Sobic.010G207900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@prenyltransferase, putative, expressed K09833: HPT, HGGT, homogentisate phytyltransferase / homogentisate geranylgeranyltransferase
4 Sobic.007G126000 - -
5 Sobic.005G083280 - -
6 Sobic.001G261529 - -
7 Sobic.006G018751 - -
8 Sobic.009G014900 expressed protein -
9 Sobic.007G086701 - -
10 Sobic.003G092600 seven in absentia protein family protein, expressed -
11 Sobic.010G193700 expressed protein -
12 Sobic.001G264600 - -
13 Sobic.005G124400 - -
14 Sobic.009G056100 splicing factor, arginine/serine-rich, putative, expressed -
15 Sobic.001G371600 - -
16 Sobic.006G015800 "1,4-alpha-glucan branching enzyme/starch branching enzyme II, PULLULANASE 1, CHLOROPLASTIC"(PubMedID : 21853065)@Alpha amylase, catalytic domain containing protein, expressed -
17 Sobic.004G196800 tetratricopeptide repeat containing protein, putative, expressed -
18 Sobic.002G266600 - K03006: RPB1, DNA-directed RNA polymerase II subunit RPB1
19 Sobic.007G199500 MBTB30 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
20 Sobic.002G099866 - -


Gene co-expression network
sample Sobic002G174500 Sobic002G174500 Sobic002G147466 Sobic002G147466 Sobic002G174500--Sobic002G147466 Sobic004G322901 Sobic004G322901 Sobic002G174500--Sobic004G322901 Sobic010G207900 Sobic010G207900 Sobic002G174500--Sobic010G207900 Sobic007G126000 Sobic007G126000 Sobic002G174500--Sobic007G126000 Sobic005G083280 Sobic005G083280 Sobic002G174500--Sobic005G083280 Sobic001G261529 Sobic001G261529 Sobic002G174500--Sobic001G261529 Sobic006G018751 Sobic006G018751 Sobic002G174500--Sobic006G018751 Sobic009G014900 Sobic009G014900 Sobic002G174500--Sobic009G014900 Sobic007G086701 Sobic007G086701 Sobic002G174500--Sobic007G086701 Sobic005G124400 Sobic005G124400 Sobic002G147466--Sobic005G124400 Sobic002G147466--Sobic009G014900 Sobic002G147466--Sobic004G322901 Sobic003G211600 Sobic003G211600 Sobic002G147466--Sobic003G211600 Sobic002G147466--Sobic002G174500 Sobic005G174200 Sobic005G174200 Sobic002G147466--Sobic005G174200 Sobic007G032500 Sobic007G032500 Sobic002G147466--Sobic007G032500 Sobic001G374600 Sobic001G374600 Sobic002G147466--Sobic001G374600 Sobic009G062300 Sobic009G062300 Sobic002G147466--Sobic009G062300 Sobic004G322901--Sobic005G083280 Sobic004G322901--Sobic001G261529 Sobic003G092600 Sobic003G092600 Sobic004G322901--Sobic003G092600 Sobic004G322901--Sobic009G014900 Sobic006G015800 Sobic006G015800 Sobic004G322901--Sobic006G015800 Sobic004G322901--Sobic007G126000 Sobic004G322901--Sobic002G147466 Sobic004G322901--Sobic006G018751 Sobic002G015800 Sobic002G015800 Sobic004G322901--Sobic002G015800 Sobic010G207900--Sobic006G018751 Sobic010G207900--Sobic007G086701 Sobic010G207900--Sobic007G126000 Sobic001G264600 Sobic001G264600 Sobic010G207900--Sobic001G264600 Sobic010G207900--Sobic004G322901 Sobic010G207900--Sobic002G174500 Sobic009G056100 Sobic009G056100 Sobic010G207900--Sobic009G056100 Sobic010G207900--Sobic005G083280 Sobic010G207900--Sobic001G261529 Sobic007G126000--Sobic010G207900 Sobic007G126000--Sobic006G018751 Sobic007G126000--Sobic004G322901 Sobic007G126000--Sobic009G056100 Sobic007G126000--Sobic005G083280 Sobic002G286800 Sobic002G286800 Sobic007G126000--Sobic002G286800 Sobic007G126000--Sobic007G086701 Sobic009G202200 Sobic009G202200 Sobic007G126000--Sobic009G202200 Sobic001G371600 Sobic001G371600 Sobic007G126000--Sobic001G371600 Sobic005G083280--Sobic001G261529 Sobic005G083280--Sobic004G322901 Sobic005G083280--Sobic003G092600 Sobic005G083280--Sobic002G015800 Sobic005G083280--Sobic001G264600 Sobic005G083280--Sobic006G018751 Sobic005G083280--Sobic006G015800 Sobic005G083280--Sobic007G086701 Sobic005G083280--Sobic009G014900 Sobic001G261529--Sobic005G083280 Sobic001G261529--Sobic004G322901 Sobic001G261529--Sobic001G264600 Sobic001G261529--Sobic003G092600 Sobic001G261529--Sobic002G015800 Sobic002G266600 Sobic002G266600 Sobic001G261529--Sobic002G266600 Sobic001G261529--Sobic007G086701 Sobic001G261529--Sobic006G018751 Sobic002G099866 Sobic002G099866 Sobic001G261529--Sobic002G099866 Sobic006G018751--Sobic007G086701 Sobic006G018751--Sobic010G207900 Sobic006G018751--Sobic001G264600 Sobic006G018751--Sobic001G261529 Sobic006G018751--Sobic005G083280 Sobic006G018751--Sobic007G126000 Sobic006G018751--Sobic004G322901 Sobic006G018751--Sobic002G266600 Sobic002G066700 Sobic002G066700 Sobic006G018751--Sobic002G066700 Sobic009G014900--Sobic003G092600 Sobic009G014900--Sobic004G322901 Sobic009G014900--Sobic002G147466 Sobic003G325800 Sobic003G325800 Sobic009G014900--Sobic003G325800 Sobic009G014900--Sobic006G015800 Sobic003G414000 Sobic003G414000 Sobic009G014900--Sobic003G414000 Sobic009G014900--Sobic005G083280 Sobic002G267700 Sobic002G267700 Sobic009G014900--Sobic002G267700 Sobic003G091500 Sobic003G091500 Sobic009G014900--Sobic003G091500 Sobic007G086701--Sobic006G018751 Sobic007G086701--Sobic001G264600 Sobic007G086701--Sobic002G266600 Sobic007G086701--Sobic010G207900 Sobic007G086701--Sobic001G261529 Sobic007G086701--Sobic002G066700 Sobic007G086701--Sobic005G083280 Sobic007G086701--Sobic004G322901 Sobic007G086701--Sobic002G099866
Octagon: transcription factors


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