Gene annotation
Transcriptome id Sobic.004G196800.3,Sobic.004G196800.1,Sobic.004G196800.4,Sobic.004G196800.2
Synonym FLU, Sb04g024370
Functional annotation tetratricopeptide repeat containing protein, putative, expressed
UniProt A0A1Z5RNA6 , A0A1Z5RP49 , C5XWD7 , A0A1Z5RPC0
Pfam PF13424
Panther DB PTHR10098 PTHR10098:SF117
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G14110 : Tetratricopeptide repeat (TPR)-like superfamily protein
RAP-DB (Rice) LOC_Os02g37470.1 : tetratricopeptide repeat containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a021365
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.004G196800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G025100 transporter, putative, expressed -
2 Sobic.004G210000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ACT domain containing protein, expressed K01653: E2.2.1.6S, ilvH, acetolactate synthase I/III small subunit
3 Sobic.006G015800 "1,4-alpha-glucan branching enzyme/starch branching enzyme II, PULLULANASE 1, CHLOROPLASTIC"(PubMedID : 21853065)@Alpha amylase, catalytic domain containing protein, expressed -
4 Sobic.010G207400 protein kinase domain containing protein, expressed -
5 Sobic.010G047300 GDSL-like lipase/acylhydrolase, putative, expressed -
6 Sobic.005G077900 OsFBX411 - F-box domain containing protein, expressed -
7 Sobic.002G293100 ZOS9-17 - C2H2 zinc finger protein, expressed -
8 Sobic.004G038900 expressed protein -
9 Sobic.009G033500 peroxidase precursor, putative, expressed K00430: peroxidase
10 Sobic.003G092600 seven in absentia protein family protein, expressed -
11 Sobic.004G294100 ZOS2-14 - C2H2 zinc finger protein, expressed -
12 Sobic.010G060100 leucoanthocyanidin dioxygenase, putative, expressed -
13 Sobic.004G262100 3-hydroxy-3-methylglutaryl-coenzyme A reductase, putative, expressed K00021: hydroxymethylglutaryl-CoA reductase (NADPH)
14 Sobic.005G171800 OsFBDUF20 - F-box and DUF domain containing protein, expressed -
15 Sobic.007G205400 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
16 Sobic.003G304500 expressed protein -
17 Sobic.007G150700 Leucine Rich Repeat family protein, expressed K15082: DNA repair protein RAD7
18 Sobic.005G021100 - -
19 Sobic.004G171600 helix-loop-helix DNA-binding domain containing protein, expressed -
20 Sobic.001G175501 - -


Gene co-expression network
sample Sobic004G196800 Sobic004G196800 Sobic009G025100 Sobic009G025100 Sobic004G196800--Sobic009G025100 Sobic004G210000 Sobic004G210000 Sobic004G196800--Sobic004G210000 Sobic006G015800 Sobic006G015800 Sobic004G196800--Sobic006G015800 Sobic010G207400 Sobic010G207400 Sobic004G196800--Sobic010G207400 Sobic010G047300 Sobic010G047300 Sobic004G196800--Sobic010G047300 Sobic005G077900 Sobic005G077900 Sobic004G196800--Sobic005G077900 Sobic002G293100 Sobic002G293100 Sobic004G196800--Sobic002G293100 Sobic004G038900 Sobic004G038900 Sobic004G196800--Sobic004G038900 Sobic009G033500 Sobic009G033500 Sobic004G196800--Sobic009G033500 Sobic001G170500 Sobic001G170500 Sobic009G025100--Sobic001G170500 Sobic008G039700 Sobic008G039700 Sobic009G025100--Sobic008G039700 Sobic010G037200 Sobic010G037200 Sobic009G025100--Sobic010G037200 Sobic010G168500 Sobic010G168500 Sobic009G025100--Sobic010G168500 Sobic008G081700 Sobic008G081700 Sobic009G025100--Sobic008G081700 Sobic009G071600 Sobic009G071600 Sobic009G025100--Sobic009G071600 Sobic010G227400 Sobic010G227400 Sobic009G025100--Sobic010G227400 Sobic008G088450 Sobic008G088450 Sobic009G025100--Sobic008G088450 Sobic002G338600 Sobic002G338600 Sobic009G025100--Sobic002G338600 Sobic004G210000--Sobic004G196800 Sobic003G430100 Sobic003G430100 Sobic004G210000--Sobic003G430100 Sobic008G116100 Sobic008G116100 Sobic004G210000--Sobic008G116100 Sobic010G020100 Sobic010G020100 Sobic004G210000--Sobic010G020100 Sobic007G041200 Sobic007G041200 Sobic004G210000--Sobic007G041200 Sobic010G084800 Sobic010G084800 Sobic004G210000--Sobic010G084800 Sobic007G150700 Sobic007G150700 Sobic004G210000--Sobic007G150700 Sobic004G210000--Sobic010G047300 Sobic008G109600 Sobic008G109600 Sobic004G210000--Sobic008G109600 Sobic003G092600 Sobic003G092600 Sobic006G015800--Sobic003G092600 Sobic004G212350 Sobic004G212350 Sobic006G015800--Sobic004G212350 Sobic005G082300 Sobic005G082300 Sobic006G015800--Sobic005G082300 Sobic002G172200 Sobic002G172200 Sobic006G015800--Sobic002G172200 Sobic002G100000 Sobic002G100000 Sobic006G015800--Sobic002G100000 Sobic004G322901 Sobic004G322901 Sobic006G015800--Sobic004G322901 Sobic001G371600 Sobic001G371600 Sobic006G015800--Sobic001G371600 Sobic005G032500 Sobic005G032500 Sobic006G015800--Sobic005G032500 Sobic001G489075 Sobic001G489075 Sobic006G015800--Sobic001G489075 Sobic005G171800 Sobic005G171800 Sobic010G207400--Sobic005G171800 Sobic004G294100 Sobic004G294100 Sobic010G207400--Sobic004G294100 Sobic010G207400--Sobic009G025100 Sobic003G230500 Sobic003G230500 Sobic010G207400--Sobic003G230500 Sobic010G207400--Sobic010G227400 Sobic010G207400--Sobic010G168500 Sobic009G077250 Sobic009G077250 Sobic010G207400--Sobic009G077250 Sobic010G207400--Sobic008G039700 Sobic001G158600 Sobic001G158600 Sobic010G207400--Sobic001G158600 Sobic009G058300 Sobic009G058300 Sobic010G047300--Sobic009G058300 Sobic006G264800 Sobic006G264800 Sobic010G047300--Sobic006G264800 Sobic002G172100 Sobic002G172100 Sobic010G047300--Sobic002G172100 Sobic010G047300--Sobic001G489075 Sobic010G047300--Sobic008G109600 Sobic002G108300 Sobic002G108300 Sobic010G047300--Sobic002G108300 Sobic010G047300--Sobic002G172200 Sobic001G284700 Sobic001G284700 Sobic010G047300--Sobic001G284700 Sobic002G015400 Sobic002G015400 Sobic010G047300--Sobic002G015400 Sobic004G171600 Sobic004G171600 Sobic005G077900--Sobic004G171600 Sobic005G174000 Sobic005G174000 Sobic005G077900--Sobic005G174000 Sobic001G200900 Sobic001G200900 Sobic005G077900--Sobic001G200900 Sobic005G077900--Sobic002G293100 Sobic001G233600 Sobic001G233600 Sobic005G077900--Sobic001G233600 Sobic002G007700 Sobic002G007700 Sobic005G077900--Sobic002G007700 Sobic005G021100 Sobic005G021100 Sobic005G077900--Sobic005G021100 Sobic005G077900--Sobic001G489075 Sobic008G088900 Sobic008G088900 Sobic005G077900--Sobic008G088900 Sobic002G293100--Sobic004G171600 Sobic002G293100--Sobic005G077900 Sobic002G293100--Sobic005G174000 Sobic002G293100--Sobic001G200900 Sobic002G293100--Sobic005G021100 Sobic009G061900 Sobic009G061900 Sobic002G293100--Sobic009G061900 Sobic002G293100--Sobic001G489075 Sobic002G089500 Sobic002G089500 Sobic002G293100--Sobic002G089500 Sobic002G293100--Sobic001G233600 Sobic004G038900--Sobic005G171800 Sobic007G128400 Sobic007G128400 Sobic004G038900--Sobic007G128400 Sobic004G038900--Sobic010G207400 Sobic003G207100 Sobic003G207100 Sobic004G038900--Sobic003G207100 Sobic003G091500 Sobic003G091500 Sobic004G038900--Sobic003G091500 Sobic004G038900--Sobic002G007700 Sobic005G174500 Sobic005G174500 Sobic004G038900--Sobic005G174500 Sobic004G038900--Sobic010G047300 Sobic008G184100 Sobic008G184100 Sobic004G038900--Sobic008G184100 Sobic007G091200 Sobic007G091200 Sobic009G033500--Sobic007G091200 Sobic009G033500--Sobic007G041200 Sobic010G060100 Sobic010G060100 Sobic009G033500--Sobic010G060100 Sobic001G425900 Sobic001G425900 Sobic009G033500--Sobic001G425900 Sobic010G118200 Sobic010G118200 Sobic009G033500--Sobic010G118200 Sobic009G033500--Sobic010G084800 Sobic007G205400 Sobic007G205400 Sobic009G033500--Sobic007G205400 Sobic004G133600 Sobic004G133600 Sobic009G033500--Sobic004G133600 Sobic001G518700 Sobic001G518700 Sobic009G033500--Sobic001G518700
Octagon: transcription factors


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