Hb_073373_010

Information

Type -
Description -
Location Contig73373: 1157-2568
Sequence    

Annotation

kegg
ID bvg:104900936
description uncharacterized LOC104900936
nr
ID KDP34728.1
description hypothetical protein JCGZ_11284 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KID4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11284 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_073373_010 0.0 - - hypothetical protein JCGZ_11284 [Jatropha curcas]
2 Hb_041626_010 0.0005762642 - - PREDICTED: uncharacterized protein LOC105631130 [Jatropha curcas]
3 Hb_159777_010 0.0014204617 - - JHL22C18.10 [Jatropha curcas]
4 Hb_000266_070 0.0026931665 desease resistance Gene Name: NB-ARC PREDICTED: uncharacterized protein LOC105765578 [Gossypium raimondii]
5 Hb_030085_050 0.0030140378 - - PREDICTED: uncharacterized protein LOC105797448 [Gossypium raimondii]
6 Hb_000206_260 0.003391133 - - cysteine protease, putative [Ricinus communis]
7 Hb_002020_030 0.0040035623 - - PREDICTED: uncharacterized protein LOC105631130 [Jatropha curcas]
8 Hb_104984_010 0.0042797309 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
9 Hb_006617_030 0.0050561404 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
10 Hb_010023_020 0.0051919328 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
11 Hb_048482_010 0.008982051 - - -
12 Hb_031104_010 0.0115299069 - - PREDICTED: uncharacterized protein LOC105800880, partial [Gossypium raimondii]
13 Hb_000283_160 0.0147340215 - - hypothetical protein JCGZ_23510 [Jatropha curcas]
14 Hb_072825_010 0.0181973587 - - Uncharacterized protein TCM_023328 [Theobroma cacao]
15 Hb_065059_010 0.0249988423 - - PREDICTED: uncharacterized protein LOC104907634 [Beta vulgaris subsp. vulgaris]
16 Hb_000118_050 0.0252567176 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
17 Hb_008269_020 0.0253241741 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
18 Hb_084299_010 0.0259180986 - - PREDICTED: uncharacterized protein LOC104233139 [Nicotiana sylvestris]
19 Hb_006221_020 0.0260690965 - - PREDICTED: uncharacterized protein LOC104227769, partial [Nicotiana sylvestris]
20 Hb_002656_040 0.026160938 desease resistance Gene Name: NB-ARC conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_073373_010 Hb_073373_010 Hb_041626_010 Hb_041626_010 Hb_073373_010--Hb_041626_010 Hb_159777_010 Hb_159777_010 Hb_073373_010--Hb_159777_010 Hb_000266_070 Hb_000266_070 Hb_073373_010--Hb_000266_070 Hb_030085_050 Hb_030085_050 Hb_073373_010--Hb_030085_050 Hb_000206_260 Hb_000206_260 Hb_073373_010--Hb_000206_260 Hb_002020_030 Hb_002020_030 Hb_073373_010--Hb_002020_030 Hb_041626_010--Hb_159777_010 Hb_041626_010--Hb_000206_260 Hb_041626_010--Hb_000266_070 Hb_041626_010--Hb_030085_050 Hb_104984_010 Hb_104984_010 Hb_041626_010--Hb_104984_010 Hb_159777_010--Hb_000266_070 Hb_159777_010--Hb_030085_050 Hb_159777_010--Hb_002020_030 Hb_006617_030 Hb_006617_030 Hb_159777_010--Hb_006617_030 Hb_000266_070--Hb_030085_050 Hb_000266_070--Hb_002020_030 Hb_000266_070--Hb_006617_030 Hb_010023_020 Hb_010023_020 Hb_000266_070--Hb_010023_020 Hb_030085_050--Hb_002020_030 Hb_030085_050--Hb_006617_030 Hb_030085_050--Hb_010023_020 Hb_000206_260--Hb_104984_010 Hb_000206_260--Hb_159777_010 Hb_048482_010 Hb_048482_010 Hb_000206_260--Hb_048482_010 Hb_000206_260--Hb_000266_070 Hb_002020_030--Hb_006617_030 Hb_002020_030--Hb_010023_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.013033 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.0586877

CAGE analysis