Hb_007513_010

Information

Type -
Description -
Location Contig7513: 245-826
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007513_010 0.0 - - -
2 Hb_006120_100 0.1853991374 - - -
3 Hb_002357_050 0.2780150603 - - -
4 Hb_001930_020 0.2793359512 - - PREDICTED: pectinesterase QRT1 [Jatropha curcas]
5 Hb_005357_090 0.2797974075 - - ubiquitin, putative [Ricinus communis]
6 Hb_005078_030 0.280655545 - - -
7 Hb_004757_030 0.2808534303 - - -
8 Hb_124518_010 0.2841185982 - - PREDICTED: uncharacterized protein LOC105763691 [Gossypium raimondii]
9 Hb_000735_150 0.2942538752 - - hypothetical protein JCGZ_15322 [Jatropha curcas]
10 Hb_001318_090 0.3007809166 - - PREDICTED: zinc finger protein 598 [Jatropha curcas]
11 Hb_012725_080 0.3013043665 - - -
12 Hb_005396_160 0.3119009486 - - PREDICTED: clavaminate synthase-like protein At3g21360 [Jatropha curcas]
13 Hb_052983_010 0.3442964859 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
14 Hb_138652_010 0.3573641324 - - hypothetical protein JCGZ_13474 [Jatropha curcas]
15 Hb_042211_010 0.3577406366 - - PREDICTED: uncharacterized protein LOC103404019 [Malus domestica]
16 Hb_001190_090 0.3611064756 - - PREDICTED: uncharacterized protein LOC105638813 [Jatropha curcas]
17 Hb_181909_010 0.3658705539 - - PREDICTED: uncharacterized protein LOC105786773 [Gossypium raimondii]
18 Hb_043674_060 0.3744693465 - - PREDICTED: uncharacterized protein LOC104240691 [Nicotiana sylvestris]
19 Hb_000392_390 0.3769812366 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
20 Hb_004108_030 0.3771676426 - - -

Gene co-expression network

sample Hb_007513_010 Hb_007513_010 Hb_006120_100 Hb_006120_100 Hb_007513_010--Hb_006120_100 Hb_002357_050 Hb_002357_050 Hb_007513_010--Hb_002357_050 Hb_001930_020 Hb_001930_020 Hb_007513_010--Hb_001930_020 Hb_005357_090 Hb_005357_090 Hb_007513_010--Hb_005357_090 Hb_005078_030 Hb_005078_030 Hb_007513_010--Hb_005078_030 Hb_004757_030 Hb_004757_030 Hb_007513_010--Hb_004757_030 Hb_000735_150 Hb_000735_150 Hb_006120_100--Hb_000735_150 Hb_124518_010 Hb_124518_010 Hb_006120_100--Hb_124518_010 Hb_006120_100--Hb_005357_090 Hb_006120_100--Hb_001930_020 Hb_006120_100--Hb_002357_050 Hb_002357_050--Hb_001930_020 Hb_002357_050--Hb_005078_030 Hb_002357_050--Hb_004757_030 Hb_002357_050--Hb_005357_090 Hb_002357_050--Hb_124518_010 Hb_002357_050--Hb_000735_150 Hb_001930_020--Hb_005357_090 Hb_001930_020--Hb_124518_010 Hb_001930_020--Hb_005078_030 Hb_001930_020--Hb_004757_030 Hb_001930_020--Hb_000735_150 Hb_005357_090--Hb_124518_010 Hb_005357_090--Hb_000735_150 Hb_005357_090--Hb_005078_030 Hb_005357_090--Hb_004757_030 Hb_005078_030--Hb_004757_030 Hb_001318_090 Hb_001318_090 Hb_005078_030--Hb_001318_090 Hb_012725_080 Hb_012725_080 Hb_005078_030--Hb_012725_080 Hb_004757_030--Hb_001318_090 Hb_004757_030--Hb_012725_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.137382 0.0594861 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.209957 0 0

CAGE analysis