Hb_007304_090

Information

Type -
Description -
Location Contig7304: 93207-93752
Sequence    

Annotation

kegg
ID pop:POPTR_0002s06370g
description POPTRDRAFT_749099; hypothetical protein
nr
ID XP_012086021.1
description PREDICTED: uncharacterized protein LOC105645120 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JQD6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22270 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007304_090 0.0 - - PREDICTED: uncharacterized protein LOC105645120 [Jatropha curcas]
2 Hb_011512_070 0.0743989356 transcription factor TF Family: PHD Inhibitor of growth protein, putative [Ricinus communis]
3 Hb_027380_050 0.0874757402 - - PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like [Jatropha curcas]
4 Hb_007220_010 0.0881734858 - - PREDICTED: methylcrotonoyl-CoA carboxylase beta chain, mitochondrial [Jatropha curcas]
5 Hb_006153_110 0.0886368273 - - dimethylaniline monooxygenase, putative [Ricinus communis]
6 Hb_003669_020 0.090567396 - - PREDICTED: high mobility group nucleosome-binding domain-containing protein 5 [Populus euphratica]
7 Hb_000046_050 0.0987365702 - - PREDICTED: LEC14B homolog [Jatropha curcas]
8 Hb_000441_110 0.099356198 - - PREDICTED: uncharacterized protein LOC105646523 [Jatropha curcas]
9 Hb_000217_030 0.0996350207 - - Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1 [Theobroma cacao]
10 Hb_000327_060 0.0999004155 - - PREDICTED: uncharacterized protein LOC105635258 isoform X2 [Jatropha curcas]
11 Hb_010098_050 0.1005993321 - - PREDICTED: putative deoxyribonuclease tatdn3-A [Jatropha curcas]
12 Hb_001691_140 0.1011419329 - - mitochondrial 50S ribosomal protein L21 [Hevea brasiliensis]
13 Hb_000152_500 0.1015386644 - - PREDICTED: probable mitochondrial intermediate peptidase, mitochondrial [Jatropha curcas]
14 Hb_003052_190 0.1015979221 - - PREDICTED: uncharacterized protein LOC105641937 isoform X2 [Jatropha curcas]
15 Hb_000656_240 0.1025760141 - - proteasome subunit alpha type, putative [Ricinus communis]
16 Hb_000169_040 0.1029590981 - - PREDICTED: stress response protein nst1-like [Jatropha curcas]
17 Hb_001470_030 0.1036761909 - - PREDICTED: MORC family CW-type zinc finger protein 3 isoform X2 [Jatropha curcas]
18 Hb_002056_050 0.1037091695 - - PREDICTED: uncharacterized protein LOC105130744 [Populus euphratica]
19 Hb_000329_760 0.1038196549 - - PREDICTED: probable mitochondrial import inner membrane translocase subunit TIM21 [Jatropha curcas]
20 Hb_005446_010 0.1038987678 - - PREDICTED: zinc finger protein 830 [Jatropha curcas]

Gene co-expression network

sample Hb_007304_090 Hb_007304_090 Hb_011512_070 Hb_011512_070 Hb_007304_090--Hb_011512_070 Hb_027380_050 Hb_027380_050 Hb_007304_090--Hb_027380_050 Hb_007220_010 Hb_007220_010 Hb_007304_090--Hb_007220_010 Hb_006153_110 Hb_006153_110 Hb_007304_090--Hb_006153_110 Hb_003669_020 Hb_003669_020 Hb_007304_090--Hb_003669_020 Hb_000046_050 Hb_000046_050 Hb_007304_090--Hb_000046_050 Hb_000656_240 Hb_000656_240 Hb_011512_070--Hb_000656_240 Hb_002226_060 Hb_002226_060 Hb_011512_070--Hb_002226_060 Hb_000529_030 Hb_000529_030 Hb_011512_070--Hb_000529_030 Hb_010098_050 Hb_010098_050 Hb_011512_070--Hb_010098_050 Hb_000205_090 Hb_000205_090 Hb_011512_070--Hb_000205_090 Hb_001245_100 Hb_001245_100 Hb_027380_050--Hb_001245_100 Hb_058999_020 Hb_058999_020 Hb_027380_050--Hb_058999_020 Hb_005779_060 Hb_005779_060 Hb_027380_050--Hb_005779_060 Hb_000684_470 Hb_000684_470 Hb_027380_050--Hb_000684_470 Hb_000152_500 Hb_000152_500 Hb_027380_050--Hb_000152_500 Hb_001030_020 Hb_001030_020 Hb_027380_050--Hb_001030_020 Hb_000169_040 Hb_000169_040 Hb_007220_010--Hb_000169_040 Hb_028486_030 Hb_028486_030 Hb_007220_010--Hb_028486_030 Hb_000840_180 Hb_000840_180 Hb_007220_010--Hb_000840_180 Hb_001318_260 Hb_001318_260 Hb_007220_010--Hb_001318_260 Hb_000327_060 Hb_000327_060 Hb_007220_010--Hb_000327_060 Hb_000331_470 Hb_000331_470 Hb_006153_110--Hb_000331_470 Hb_000010_190 Hb_000010_190 Hb_006153_110--Hb_000010_190 Hb_000217_030 Hb_000217_030 Hb_006153_110--Hb_000217_030 Hb_006153_110--Hb_010098_050 Hb_006153_110--Hb_011512_070 Hb_005843_140 Hb_005843_140 Hb_003669_020--Hb_005843_140 Hb_044653_040 Hb_044653_040 Hb_003669_020--Hb_044653_040 Hb_006198_070 Hb_006198_070 Hb_003669_020--Hb_006198_070 Hb_000310_020 Hb_000310_020 Hb_003669_020--Hb_000310_020 Hb_003669_020--Hb_011512_070 Hb_000505_130 Hb_000505_130 Hb_003669_020--Hb_000505_130 Hb_004324_270 Hb_004324_270 Hb_000046_050--Hb_004324_270 Hb_012675_050 Hb_012675_050 Hb_000046_050--Hb_012675_050 Hb_032264_070 Hb_032264_070 Hb_000046_050--Hb_032264_070 Hb_003540_240 Hb_003540_240 Hb_000046_050--Hb_003540_240 Hb_000061_210 Hb_000061_210 Hb_000046_050--Hb_000061_210 Hb_000107_160 Hb_000107_160 Hb_000046_050--Hb_000107_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.97635 7.30986 8.59005 4.61844 4.74479 6.11253
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
12.0075 20.4271 9.15214 10.0931 9.24189

CAGE analysis