Hb_005474_070

Information

Type -
Description -
Location Contig5474: 97711-97992
Sequence    

Annotation

kegg
ID egr:104445031
description uncharacterized LOC104445031
nr
ID KDP34799.1
description hypothetical protein JCGZ_10579 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KSJ9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10579 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005474_070 0.0 - - hypothetical protein JCGZ_10579 [Jatropha curcas]
2 Hb_003647_070 0.0197314298 - - hypothetical protein POPTR_0006s09430g [Populus trichocarpa]
3 Hb_003058_150 0.0268017916 - - PREDICTED: gibberellin 3-beta-dioxygenase 1-like [Jatropha curcas]
4 Hb_002010_040 0.0282186013 - - -
5 Hb_000007_290 0.030287249 - - hypothetical protein AALP_AAs43195U000200 [Arabis alpina]
6 Hb_002042_220 0.0361418596 - - Kinesin heavy chain, putative [Ricinus communis]
7 Hb_007534_080 0.0431335609 - - d-3-phosphoglycerate dehydrogenase, putative [Ricinus communis]
8 Hb_000940_120 0.0539071186 - - PREDICTED: proline-rich protein 4-like isoform X2 [Pyrus x bretschneideri]
9 Hb_003805_110 0.054027679 - - PREDICTED: laccase-11-like [Jatropha curcas]
10 Hb_001097_110 0.0547849759 - - gibberellin 20-oxidase, putative [Ricinus communis]
11 Hb_001140_110 0.0550733975 - - hypothetical protein JCGZ_26123 [Jatropha curcas]
12 Hb_045260_010 0.0580468695 - - PREDICTED: leucine-rich repeat receptor protein kinase EMS1-like [Jatropha curcas]
13 Hb_000140_040 0.0645244414 - - PREDICTED: UDP-glycosyltransferase 79B6-like [Jatropha curcas]
14 Hb_004197_030 0.06739594 - - hypothetical protein JCGZ_16263 [Jatropha curcas]
15 Hb_000363_070 0.0722851173 - - conserved hypothetical protein [Ricinus communis]
16 Hb_001951_050 0.076298354 - - chlorophyll A/B binding protein, putative [Ricinus communis]
17 Hb_029584_020 0.0790476142 - - conserved hypothetical protein [Ricinus communis]
18 Hb_077976_010 0.0794870791 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1, partial [Populus euphratica]
19 Hb_042123_010 0.0796044099 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Populus euphratica]
20 Hb_099263_010 0.0818988669 - - hypothetical protein AALP_AAs50029U000400 [Arabis alpina]

Gene co-expression network

sample Hb_005474_070 Hb_005474_070 Hb_003647_070 Hb_003647_070 Hb_005474_070--Hb_003647_070 Hb_003058_150 Hb_003058_150 Hb_005474_070--Hb_003058_150 Hb_002010_040 Hb_002010_040 Hb_005474_070--Hb_002010_040 Hb_000007_290 Hb_000007_290 Hb_005474_070--Hb_000007_290 Hb_002042_220 Hb_002042_220 Hb_005474_070--Hb_002042_220 Hb_007534_080 Hb_007534_080 Hb_005474_070--Hb_007534_080 Hb_003647_070--Hb_002010_040 Hb_003647_070--Hb_000007_290 Hb_045260_010 Hb_045260_010 Hb_003647_070--Hb_045260_010 Hb_003647_070--Hb_002042_220 Hb_003647_070--Hb_007534_080 Hb_003805_110 Hb_003805_110 Hb_003058_150--Hb_003805_110 Hb_001140_110 Hb_001140_110 Hb_003058_150--Hb_001140_110 Hb_000940_120 Hb_000940_120 Hb_003058_150--Hb_000940_120 Hb_003058_150--Hb_003647_070 Hb_003058_150--Hb_007534_080 Hb_002010_040--Hb_000007_290 Hb_002010_040--Hb_002042_220 Hb_002010_040--Hb_045260_010 Hb_099263_010 Hb_099263_010 Hb_002010_040--Hb_099263_010 Hb_000007_290--Hb_002042_220 Hb_000007_290--Hb_045260_010 Hb_000007_290--Hb_099263_010 Hb_004197_030 Hb_004197_030 Hb_002042_220--Hb_004197_030 Hb_002042_220--Hb_000940_120 Hb_001097_110 Hb_001097_110 Hb_007534_080--Hb_001097_110 Hb_000140_040 Hb_000140_040 Hb_007534_080--Hb_000140_040 Hb_007534_080--Hb_003805_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.320113 0.779432 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 3.0963

CAGE analysis