Hb_001681_010

Information

Type -
Description -
Location Contig1681: 1933-4293
Sequence    

Annotation

kegg
ID pop:POPTR_0005s18720g
description POPTRDRAFT_651125; cytochrome P450 family protein
nr
ID XP_011047896.1
description PREDICTED: cytochrome P450 81E8-like isoform X1 [Populus euphratica]
swissprot
ID Q6WNQ8
description Cytochrome P450 81E8 OS=Medicago truncatula GN=CYP81E8 PE=2 SV=1
trembl
ID B9H6K9
description Cytochrome P450 family protein OS=Populus trichocarpa GN=POPTR_0005s18720g PE=3 SV=2
Gene Ontology
ID GO:0004497
description cytochrome p450 family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001681_010 0.0 - - PREDICTED: cytochrome P450 81E8-like isoform X1 [Populus euphratica]
2 Hb_184398_010 0.0037860913 - - PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus sinensis]
3 Hb_004466_080 0.0190359683 - - PREDICTED: SNF1-related protein kinase regulatory subunit gamma-1-like [Jatropha curcas]
4 Hb_025654_010 0.0329620474 - - PREDICTED: uncharacterized protein LOC104221396 [Nicotiana sylvestris]
5 Hb_011540_050 0.0344802247 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
6 Hb_187301_010 0.0347757188 - - PREDICTED: uncharacterized protein LOC105629082 [Jatropha curcas]
7 Hb_000088_280 0.0382501865 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Jatropha curcas]
8 Hb_003370_040 0.0426242763 - - PREDICTED: uncharacterized protein LOC105629587 [Jatropha curcas]
9 Hb_001192_020 0.044330197 - - -
10 Hb_000010_230 0.0536353999 - - PREDICTED: F-box/WD repeat-containing protein 11-like [Jatropha curcas]
11 Hb_002874_250 0.0553910738 - - -
12 Hb_020956_050 0.0554629636 - - PREDICTED: uncharacterized protein LOC102670328 [Glycine max]
13 Hb_008021_030 0.0584546672 - - short-chain dehydrogenase, putative [Ricinus communis]
14 Hb_001140_310 0.0594113404 - - hypothetical protein AMTR_s00025p00025050 [Amborella trichopoda]
15 Hb_004528_030 0.0594155893 - - hypothetical protein CICLE_v10033628mg, partial [Citrus clementina]
16 Hb_135174_010 0.0594401711 - - Glycosyl hydrolase family protein 43 isoform 2 [Theobroma cacao]
17 Hb_003882_030 0.0601447075 - - putative retrotransposon protein [Phyllostachys edulis]
18 Hb_003653_040 0.0640106228 - - hypothetical protein SORBIDRAFT_05g024215 [Sorghum bicolor]
19 Hb_001148_010 0.0671547485 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
20 Hb_004453_120 0.078096208 - - ammonium transporter, putative [Ricinus communis]

Gene co-expression network

sample Hb_001681_010 Hb_001681_010 Hb_184398_010 Hb_184398_010 Hb_001681_010--Hb_184398_010 Hb_004466_080 Hb_004466_080 Hb_001681_010--Hb_004466_080 Hb_025654_010 Hb_025654_010 Hb_001681_010--Hb_025654_010 Hb_011540_050 Hb_011540_050 Hb_001681_010--Hb_011540_050 Hb_187301_010 Hb_187301_010 Hb_001681_010--Hb_187301_010 Hb_000088_280 Hb_000088_280 Hb_001681_010--Hb_000088_280 Hb_184398_010--Hb_004466_080 Hb_184398_010--Hb_025654_010 Hb_184398_010--Hb_011540_050 Hb_184398_010--Hb_187301_010 Hb_184398_010--Hb_000088_280 Hb_004466_080--Hb_025654_010 Hb_004466_080--Hb_011540_050 Hb_004466_080--Hb_187301_010 Hb_004466_080--Hb_000088_280 Hb_025654_010--Hb_011540_050 Hb_025654_010--Hb_187301_010 Hb_025654_010--Hb_000088_280 Hb_003370_040 Hb_003370_040 Hb_025654_010--Hb_003370_040 Hb_001192_020 Hb_001192_020 Hb_025654_010--Hb_001192_020 Hb_011540_050--Hb_187301_010 Hb_011540_050--Hb_000088_280 Hb_011540_050--Hb_003370_040 Hb_011540_050--Hb_001192_020 Hb_187301_010--Hb_000088_280 Hb_187301_010--Hb_003370_040 Hb_187301_010--Hb_001192_020 Hb_000088_280--Hb_003370_040 Hb_000088_280--Hb_001192_020 Hb_020956_050 Hb_020956_050 Hb_000088_280--Hb_020956_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.0442877 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.283896

CAGE analysis