Hb_000193_040

Information

Type -
Description -
Location Contig193: 26824-29804
Sequence    

Annotation

kegg
ID pxb:103953455
description GDSL esterase/lipase EXL3-like
nr
ID XP_012088493.1
description PREDICTED: GDSL esterase/lipase EXL3-like [Jatropha curcas]
swissprot
ID Q94CH6
description GDSL esterase/lipase EXL3 OS=Arabidopsis thaliana GN=EXL3 PE=2 SV=1
trembl
ID A0A067JMD7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25376 PE=4 SV=1
Gene Ontology
ID GO:0016298
description gdsl esterase lipase exl3-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_19219: 28006-29378
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000193_040 0.0 - - PREDICTED: GDSL esterase/lipase EXL3-like [Jatropha curcas]
2 Hb_022862_010 0.0020350549 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 6 [Jatropha curcas]
3 Hb_154114_040 0.0025745324 - - hypothetical protein B456_001G056600 [Gossypium raimondii]
4 Hb_000173_040 0.0032812983 - - putative xylanase inhibitor, partial [Triticum aestivum]
5 Hb_000769_040 0.005828711 - - hypothetical protein VITISV_028082 [Vitis vinifera]
6 Hb_011179_010 0.0093116281 transcription factor TF Family: ERF hypothetical protein JCGZ_14625 [Jatropha curcas]
7 Hb_012675_030 0.0106143192 - - hypothetical protein POPTR_0013s04780g [Populus trichocarpa]
8 Hb_090511_010 0.0109214234 transcription factor TF Family: ERF DNA binding protein, putative [Ricinus communis]
9 Hb_030385_030 0.0127338515 - - PREDICTED: B3 domain-containing protein At3g19184 isoform X1 [Jatropha curcas]
10 Hb_130862_010 0.0131721175 - - purine permease, putative [Ricinus communis]
11 Hb_105767_030 0.0224293958 - - conserved hypothetical protein [Ricinus communis]
12 Hb_007975_070 0.0238331667 - - glycerophosphoryl diester phosphodiesterase, putative [Ricinus communis]
13 Hb_004117_070 0.0249968701 - - PREDICTED: GDSL esterase/lipase At1g71691 [Jatropha curcas]
14 Hb_000417_240 0.028776366 - - PREDICTED: uncharacterized protein LOC105649697 [Jatropha curcas]
15 Hb_003995_040 0.028916414 - - PREDICTED: tropinone reductase homolog At2g29290-like [Jatropha curcas]
16 Hb_000173_070 0.0295964937 transcription factor TF Family: bHLH PREDICTED: transcription factor MUTE [Jatropha curcas]
17 Hb_000307_080 0.0305876965 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000691_060 0.0314395605 - - RecName: Full=(S)-hydroxynitrile lyase; AltName: Full=(S)-acetone-cyanohydrin lyase; AltName: Full=Oxynitrilase [Hevea brasiliensis]
19 Hb_000280_070 0.0325481948 - - PREDICTED: PCTP-like protein isoform X1 [Jatropha curcas]
20 Hb_001926_050 0.0330181289 - - PREDICTED: peroxidase 19 [Jatropha curcas]

Gene co-expression network

sample Hb_000193_040 Hb_000193_040 Hb_022862_010 Hb_022862_010 Hb_000193_040--Hb_022862_010 Hb_154114_040 Hb_154114_040 Hb_000193_040--Hb_154114_040 Hb_000173_040 Hb_000173_040 Hb_000193_040--Hb_000173_040 Hb_000769_040 Hb_000769_040 Hb_000193_040--Hb_000769_040 Hb_011179_010 Hb_011179_010 Hb_000193_040--Hb_011179_010 Hb_012675_030 Hb_012675_030 Hb_000193_040--Hb_012675_030 Hb_022862_010--Hb_000769_040 Hb_022862_010--Hb_154114_040 Hb_022862_010--Hb_000173_040 Hb_022862_010--Hb_012675_030 Hb_090511_010 Hb_090511_010 Hb_022862_010--Hb_090511_010 Hb_154114_040--Hb_000173_040 Hb_154114_040--Hb_011179_010 Hb_154114_040--Hb_000769_040 Hb_030385_030 Hb_030385_030 Hb_154114_040--Hb_030385_030 Hb_000173_040--Hb_011179_010 Hb_000173_040--Hb_000769_040 Hb_000173_040--Hb_030385_030 Hb_000769_040--Hb_012675_030 Hb_000769_040--Hb_090511_010 Hb_130862_010 Hb_130862_010 Hb_000769_040--Hb_130862_010 Hb_011179_010--Hb_030385_030 Hb_011179_010--Hb_022862_010 Hb_011179_010--Hb_000769_040 Hb_012675_030--Hb_090511_010 Hb_012675_030--Hb_130862_010 Hb_105767_030 Hb_105767_030 Hb_012675_030--Hb_105767_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.833967 0.191604 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis