Gene annotation
Transcriptome id Sobic.010G238700.1
Synonym ATEHD1, Sb10g027960, EHD1
Functional annotation dynamin family protein, putative, expressed
UniProt C5Z8C6
Pfam PF12763 PF00350 PF16880
Panther DB PTHR11216 PTHR11216:SF73
NCBI CDD -
KEGG Orthology K12483; EH domain-containing protein 1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G20290 : EPS15 homology domain 1
RAP-DB (Rice) LOC_Os06g47330.1 : dynamin family protein, putative, expressed
MaizeGDB (Corn) Zm00025a018206 , Zm00025a034863
Brachypodium KQJ93413 , KQK17260 , PNT65921
Barley HORVU7Hr1G100500.12 , HORVU7Hr1G100500.11 , HORVU7Hr1G100500.10 , HORVU7Hr1G100500.8 , HORVU7Hr1G100500.7 , HORVU7Hr1G100500.6 , HORVU7Hr1G100500.5 , HORVU7Hr1G100500.4 , HORVU7Hr1G100500.3 , HORVU7Hr1G100500.2 , HORVU7Hr1G100500.1
Wheat TraesCS7D02G430800 , TraesCS6B02G159700 , TraesCS7B02G340200 , TraesCS7B02G340200 , TraesCS7A02G441500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G222400 RNA recognition motif containing protein, putative, expressed -
2 Sobic.001G529000 THO complex subunit 7, putative, expressed K13176: THO complex subunit 7
3 Sobic.009G036900 RNA recognition motif containing protein, putative, expressed K12876: RBM8A, RNA-binding protein 8A
4 Sobic.001G126200 acetyltransferase, GNAT family, putative, expressed K17972: NAA20, N-terminal acetyltransferase B complex catalytic subunit
5 Sobic.003G382900 signal recognition particle 72 kDa protein, putative, expressed K03108: signal recognition particle subunit SRP72
6 Sobic.004G203100 SNF7 domain containing protein, putative, expressed K12195: CHMP6, charged multivesicular body protein 6
7 Sobic.003G007500 CK1_CaseinKinase_1.1 - CK1 includes the casein kinase 1 kinases, expressed -
8 Sobic.008G132800 expressed protein -
9 Sobic.001G010700 proteasome subunit, putative, expressed K03035: PSMD12, 26S proteasome regulatory subunit N5
10 Sobic.001G439600 26S proteasome non-ATPase regulatory subunit 4, putative, expressed K03029: PSMD4, 26S proteasome regulatory subunit N10
11 Sobic.003G021200 WD domain, G-beta repeat domain containing protein, expressed K14004: protein transport protein SEC13
12 Sobic.001G230900 - K07910: Ras-related protein Rab-18
13 Sobic.004G224800 ubiquitin-conjugating enzyme, putative, expressed K10689: peroxin-4
14 Sobic.002G090700 WD domain, G-beta repeat domain containing protein, expressed K14004: protein transport protein SEC13
15 Sobic.003G217100 Yip1 domain containing protein, expressed -
16 Sobic.002G413400 ribosomal protein, putative, expressed K14842: ribosome biogenesis protein NSA2
17 Sobic.009G008600 REX1 DNA Repair family protein, expressed K10845: TTDA, GTF2H5, TFIIH basal transcription factor complex TTD-A subunit
18 Sobic.001G367000 TRAF-type zinc finger domain-containing protein 1, putative, expressed -
19 Sobic.001G285300 expressed protein -
20 Sobic.002G068300 vesicle-associated membrane protein, putative, expressed K08511: vesicle-associated membrane protein 72


Gene co-expression network
sample Sobic010G238700 Sobic010G238700 Sobic006G222400 Sobic006G222400 Sobic010G238700--Sobic006G222400 Sobic001G529000 Sobic001G529000 Sobic010G238700--Sobic001G529000 Sobic009G036900 Sobic009G036900 Sobic010G238700--Sobic009G036900 Sobic001G126200 Sobic001G126200 Sobic010G238700--Sobic001G126200 Sobic003G382900 Sobic003G382900 Sobic010G238700--Sobic003G382900 Sobic004G203100 Sobic004G203100 Sobic010G238700--Sobic004G203100 Sobic003G007500 Sobic003G007500 Sobic010G238700--Sobic003G007500 Sobic008G132800 Sobic008G132800 Sobic010G238700--Sobic008G132800 Sobic001G010700 Sobic001G010700 Sobic010G238700--Sobic001G010700 Sobic006G222400--Sobic010G238700 Sobic006G222400--Sobic001G126200 Sobic003G217100 Sobic003G217100 Sobic006G222400--Sobic003G217100 Sobic006G222400--Sobic008G132800 Sobic008G137600 Sobic008G137600 Sobic006G222400--Sobic008G137600 Sobic002G428200 Sobic002G428200 Sobic006G222400--Sobic002G428200 Sobic001G105100 Sobic001G105100 Sobic006G222400--Sobic001G105100 Sobic004G224800 Sobic004G224800 Sobic006G222400--Sobic004G224800 Sobic010G017000 Sobic010G017000 Sobic006G222400--Sobic010G017000 Sobic003G362400 Sobic003G362400 Sobic001G529000--Sobic003G362400 Sobic004G248800 Sobic004G248800 Sobic001G529000--Sobic004G248800 Sobic003G124800 Sobic003G124800 Sobic001G529000--Sobic003G124800 Sobic001G331900 Sobic001G331900 Sobic001G529000--Sobic001G331900 Sobic005G157200 Sobic005G157200 Sobic001G529000--Sobic005G157200 Sobic007G163700 Sobic007G163700 Sobic001G529000--Sobic007G163700 Sobic010G039800 Sobic010G039800 Sobic001G529000--Sobic010G039800 Sobic007G203700 Sobic007G203700 Sobic001G529000--Sobic007G203700 Sobic004G300900 Sobic004G300900 Sobic001G529000--Sobic004G300900 Sobic002G068300 Sobic002G068300 Sobic009G036900--Sobic002G068300 Sobic009G034400 Sobic009G034400 Sobic009G036900--Sobic009G034400 Sobic006G256500 Sobic006G256500 Sobic009G036900--Sobic006G256500 Sobic003G024800 Sobic003G024800 Sobic009G036900--Sobic003G024800 Sobic010G228600 Sobic010G228600 Sobic009G036900--Sobic010G228600 Sobic009G036900--Sobic010G039800 Sobic009G036900--Sobic001G529000 Sobic010G071200 Sobic010G071200 Sobic009G036900--Sobic010G071200 Sobic001G424500 Sobic001G424500 Sobic009G036900--Sobic001G424500 Sobic001G126200--Sobic006G222400 Sobic001G126200--Sobic004G224800 Sobic006G094600 Sobic006G094600 Sobic001G126200--Sobic006G094600 Sobic003G131300 Sobic003G131300 Sobic001G126200--Sobic003G131300 Sobic001G285300 Sobic001G285300 Sobic001G126200--Sobic001G285300 Sobic001G126200--Sobic010G238700 Sobic001G367000 Sobic001G367000 Sobic001G126200--Sobic001G367000 Sobic002G044000 Sobic002G044000 Sobic001G126200--Sobic002G044000 Sobic007G192100 Sobic007G192100 Sobic001G126200--Sobic007G192100 Sobic009G160600 Sobic009G160600 Sobic003G382900--Sobic009G160600 Sobic001G421400 Sobic001G421400 Sobic003G382900--Sobic001G421400 Sobic003G382900--Sobic010G238700 Sobic006G225300 Sobic006G225300 Sobic003G382900--Sobic006G225300 Sobic002G090700 Sobic002G090700 Sobic003G382900--Sobic002G090700 Sobic003G148900 Sobic003G148900 Sobic003G382900--Sobic003G148900 Sobic001G161900 Sobic001G161900 Sobic003G382900--Sobic001G161900 Sobic003G382900--Sobic006G222400 Sobic003G038600 Sobic003G038600 Sobic003G382900--Sobic003G038600 Sobic010G168600 Sobic010G168600 Sobic004G203100--Sobic010G168600 Sobic004G203100--Sobic003G007500 Sobic002G352700 Sobic002G352700 Sobic004G203100--Sobic002G352700 Sobic001G478300 Sobic001G478300 Sobic004G203100--Sobic001G478300 Sobic008G180900 Sobic008G180900 Sobic004G203100--Sobic008G180900 Sobic004G203100--Sobic010G238700 Sobic009G054700 Sobic009G054700 Sobic004G203100--Sobic009G054700 Sobic010G083700 Sobic010G083700 Sobic004G203100--Sobic010G083700 Sobic010G058900 Sobic010G058900 Sobic004G203100--Sobic010G058900 Sobic007G186300 Sobic007G186300 Sobic003G007500--Sobic007G186300 Sobic003G007500--Sobic010G083700 Sobic003G007500--Sobic010G168600 Sobic001G078500 Sobic001G078500 Sobic003G007500--Sobic001G078500 Sobic003G295400 Sobic003G295400 Sobic003G007500--Sobic003G295400 Sobic001G051200 Sobic001G051200 Sobic003G007500--Sobic001G051200 Sobic004G072800 Sobic004G072800 Sobic003G007500--Sobic004G072800 Sobic004G104900 Sobic004G104900 Sobic003G007500--Sobic004G104900 Sobic002G281300 Sobic002G281300 Sobic003G007500--Sobic002G281300 Sobic010G029400 Sobic010G029400 Sobic008G132800--Sobic010G029400 Sobic002G078400 Sobic002G078400 Sobic008G132800--Sobic002G078400 Sobic009G016201 Sobic009G016201 Sobic008G132800--Sobic009G016201 Sobic008G132800--Sobic001G331900 Sobic004G066800 Sobic004G066800 Sobic008G132800--Sobic004G066800 Sobic008G132800--Sobic001G105100 Sobic008G132800--Sobic005G157200 Sobic010G065400 Sobic010G065400 Sobic008G132800--Sobic010G065400 Sobic008G132800--Sobic003G217100 Sobic007G176200 Sobic007G176200 Sobic001G010700--Sobic007G176200 Sobic006G252200 Sobic006G252200 Sobic001G010700--Sobic006G252200 Sobic001G458700 Sobic001G458700 Sobic001G010700--Sobic001G458700 Sobic003G330500 Sobic003G330500 Sobic001G010700--Sobic003G330500 Sobic004G335000 Sobic004G335000 Sobic001G010700--Sobic004G335000 Sobic001G010700--Sobic002G428200 Sobic004G224900 Sobic004G224900 Sobic001G010700--Sobic004G224900 Sobic003G043400 Sobic003G043400 Sobic001G010700--Sobic003G043400 Sobic002G423800 Sobic002G423800 Sobic001G010700--Sobic002G423800
Octagon: transcription factors


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