Gene annotation
Transcriptome id Sobic.009G017000.1
Synonym Sb09g001630
Functional annotation expressed protein
UniProt A0A1Z5R1G3
Pfam PF05056
Panther DB PTHR33103 PTHR33103:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G01150 : Protein of unknown function (DUF674)
RAP-DB (Rice) LOC_Os05g02480.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQJ90060
Barley HORVU1Hr1G008480.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G214650 - -
2 Sobic.006G186300 fasciclin-like arabinogalactan protein, putative, expressed -
3 Sobic.006G261200 Trihelix Family(PubMedID : 24864043)@GL4(Ortholog in rice:Wu et al. (2017) )(PubMedID : 31659902)@transcription factor, putative, expressed -
4 Sobic.006G015800 "1,4-alpha-glucan branching enzyme/starch branching enzyme II, PULLULANASE 1, CHLOROPLASTIC"(PubMedID : 21853065)@Alpha amylase, catalytic domain containing protein, expressed -
5 Sobic.007G041200 cytochrome P450, putative, expressed -
6 Sobic.008G037100 expressed protein -
7 Sobic.010G118200 phosphatidylinositol 3- and 4-kinase family protein, putative, expressed -
8 Sobic.001G150300 2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
9 Sobic.009G168300 expressed protein -
10 Sobic.007G172100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@vignain precursor, putative, expressed K16292: CEP, KDEL-tailed cysteine endopeptidase
11 Sobic.004G294100 ZOS2-14 - C2H2 zinc finger protein, expressed -
12 Sobic.001G305100 pectinacetylesterase domain containing protein, expressed -
13 Sobic.009G077250 - -
14 Sobic.004G133600 Sugar transporter(PubMedID : 27330561)@"ZmSWEET4c(Ortholog in maize:Sosso et al., 2015(PubMedID : 31659882)@Zhang et al., 2015)"(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
15 Sobic.010G060100 leucoanthocyanidin dioxygenase, putative, expressed -
16 Sobic.010G047300 GDSL-like lipase/acylhydrolase, putative, expressed -
17 Sobic.003G092600 seven in absentia protein family protein, expressed -
18 Sobic.010G193700 expressed protein -
19 Sobic.004G262100 3-hydroxy-3-methylglutaryl-coenzyme A reductase, putative, expressed K00021: hydroxymethylglutaryl-CoA reductase (NADPH)
20 Sobic.007G205400 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -


Gene co-expression network
sample Sobic009G017000 Sobic009G017000 Sobic003G214650 Sobic003G214650 Sobic009G017000--Sobic003G214650 Sobic006G186300 Sobic006G186300 Sobic009G017000--Sobic006G186300 Sobic006G261200 Sobic006G261200 Sobic009G017000--Sobic006G261200 Sobic006G015800 Sobic006G015800 Sobic009G017000--Sobic006G015800 Sobic007G041200 Sobic007G041200 Sobic009G017000--Sobic007G041200 Sobic008G037100 Sobic008G037100 Sobic009G017000--Sobic008G037100 Sobic010G118200 Sobic010G118200 Sobic009G017000--Sobic010G118200 Sobic001G150300 Sobic001G150300 Sobic009G017000--Sobic001G150300 Sobic009G168300 Sobic009G168300 Sobic009G017000--Sobic009G168300 Sobic010G060100 Sobic010G060100 Sobic003G214650--Sobic010G060100 Sobic007G205400 Sobic007G205400 Sobic003G214650--Sobic007G205400 Sobic003G414000 Sobic003G414000 Sobic003G214650--Sobic003G414000 Sobic002G192600 Sobic002G192600 Sobic003G214650--Sobic002G192600 Sobic004G133600 Sobic004G133600 Sobic003G214650--Sobic004G133600 Sobic009G014900 Sobic009G014900 Sobic003G214650--Sobic009G014900 Sobic003G159850 Sobic003G159850 Sobic003G214650--Sobic003G159850 Sobic004G139700 Sobic004G139700 Sobic003G214650--Sobic004G139700 Sobic005G186300 Sobic005G186300 Sobic003G214650--Sobic005G186300 Sobic010G047300 Sobic010G047300 Sobic006G186300--Sobic010G047300 Sobic006G186300--Sobic007G041200 Sobic002G122000 Sobic002G122000 Sobic006G186300--Sobic002G122000 Sobic004G075700 Sobic004G075700 Sobic006G186300--Sobic004G075700 Sobic002G230400 Sobic002G230400 Sobic006G186300--Sobic002G230400 Sobic010G084800 Sobic010G084800 Sobic006G186300--Sobic010G084800 Sobic001G305100 Sobic001G305100 Sobic006G186300--Sobic001G305100 Sobic005G131800 Sobic005G131800 Sobic006G186300--Sobic005G131800 Sobic005G171800 Sobic005G171800 Sobic006G186300--Sobic005G171800 Sobic007G023600 Sobic007G023600 Sobic006G261200--Sobic007G023600 Sobic001G170500 Sobic001G170500 Sobic006G261200--Sobic001G170500 Sobic006G261200--Sobic009G168300 Sobic003G402100 Sobic003G402100 Sobic006G261200--Sobic003G402100 Sobic006G261200--Sobic010G118200 Sobic004G250600 Sobic004G250600 Sobic006G261200--Sobic004G250600 Sobic006G261200--Sobic009G017000 Sobic009G253800 Sobic009G253800 Sobic006G261200--Sobic009G253800 Sobic001G068200 Sobic001G068200 Sobic006G261200--Sobic001G068200 Sobic003G092600 Sobic003G092600 Sobic006G015800--Sobic003G092600 Sobic004G212350 Sobic004G212350 Sobic006G015800--Sobic004G212350 Sobic005G082300 Sobic005G082300 Sobic006G015800--Sobic005G082300 Sobic002G172200 Sobic002G172200 Sobic006G015800--Sobic002G172200 Sobic002G100000 Sobic002G100000 Sobic006G015800--Sobic002G100000 Sobic004G322901 Sobic004G322901 Sobic006G015800--Sobic004G322901 Sobic001G371600 Sobic001G371600 Sobic006G015800--Sobic001G371600 Sobic005G032500 Sobic005G032500 Sobic006G015800--Sobic005G032500 Sobic001G489075 Sobic001G489075 Sobic006G015800--Sobic001G489075 Sobic008G116100 Sobic008G116100 Sobic007G041200--Sobic008G116100 Sobic009G033500 Sobic009G033500 Sobic007G041200--Sobic009G033500 Sobic007G041200--Sobic010G084800 Sobic007G041200--Sobic010G047300 Sobic002G097601 Sobic002G097601 Sobic007G041200--Sobic002G097601 Sobic007G041200--Sobic006G186300 Sobic007G091200 Sobic007G091200 Sobic007G041200--Sobic007G091200 Sobic008G109600 Sobic008G109600 Sobic007G041200--Sobic008G109600 Sobic007G041200--Sobic010G060100 Sobic008G164101 Sobic008G164101 Sobic008G037100--Sobic008G164101 Sobic004G292833 Sobic004G292833 Sobic008G037100--Sobic004G292833 Sobic008G037100--Sobic003G414000 Sobic001G220600 Sobic001G220600 Sobic008G037100--Sobic001G220600 Sobic008G037100--Sobic003G159850 Sobic002G302200 Sobic002G302200 Sobic008G037100--Sobic002G302200 Sobic008G184100 Sobic008G184100 Sobic008G037100--Sobic008G184100 Sobic003G091500 Sobic003G091500 Sobic008G037100--Sobic003G091500 Sobic005G174500 Sobic005G174500 Sobic008G037100--Sobic005G174500 Sobic010G118200--Sobic007G091200 Sobic006G104800 Sobic006G104800 Sobic010G118200--Sobic006G104800 Sobic004G294100 Sobic004G294100 Sobic010G118200--Sobic004G294100 Sobic001G425900 Sobic001G425900 Sobic010G118200--Sobic001G425900 Sobic008G071900 Sobic008G071900 Sobic010G118200--Sobic008G071900 Sobic001G142600 Sobic001G142600 Sobic010G118200--Sobic001G142600 Sobic010G118200--Sobic009G168300 Sobic010G102900 Sobic010G102900 Sobic010G118200--Sobic010G102900 Sobic010G118200--Sobic001G170500 Sobic002G123100 Sobic002G123100 Sobic001G150300--Sobic002G123100 Sobic001G394900 Sobic001G394900 Sobic001G150300--Sobic001G394900 Sobic003G101200 Sobic003G101200 Sobic001G150300--Sobic003G101200 Sobic001G324800 Sobic001G324800 Sobic001G150300--Sobic001G324800 Sobic004G354600 Sobic004G354600 Sobic001G150300--Sobic004G354600 Sobic001G150300--Sobic004G294100 Sobic001G401975 Sobic001G401975 Sobic001G150300--Sobic001G401975 Sobic001G150300--Sobic009G017000 Sobic006G178400 Sobic006G178400 Sobic001G150300--Sobic006G178400 Sobic009G168300--Sobic008G071900 Sobic004G171500 Sobic004G171500 Sobic009G168300--Sobic004G171500 Sobic009G168300--Sobic010G102900 Sobic008G001700 Sobic008G001700 Sobic009G168300--Sobic008G001700 Sobic001G362900 Sobic001G362900 Sobic009G168300--Sobic001G362900 Sobic009G021300 Sobic009G021300 Sobic009G168300--Sobic009G021300 Sobic003G227800 Sobic003G227800 Sobic009G168300--Sobic003G227800 Sobic009G168300--Sobic001G142600 Sobic009G168300--Sobic004G294100
Octagon: transcription factors


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