Gene annotation
Transcriptome id Sobic.007G040301.1,Sobic.007G040301.2,Sobic.007G040301.3
Synonym -
Functional annotation -
UniProt A0A1Z5R7X5 , A0A1Z5R7Z5 , A0A1Z5R8W3
Pfam PF02668
Panther DB PTHR10696 PTHR10696:SF21
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT3G21360 : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
RAP-DB (Rice) LOC_Os01g09430.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQK03105
Barley HORVU3Hr1G019720.2
Wheat TraesCS3A02G108700 , TraesCS3B02G127700 , TraesCS3D02G110500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G206500 respiratory burst oxidase, putative, expressed K13447: respiratory burst oxidase
2 Sobic.001G437500 plant protein of unknown function DUF869 domain containing protein, expressed -
3 Sobic.009G026101 - -
4 Sobic.001G144200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF581 domain containing protein, expressed -
5 Sobic.001G406700 expressed protein -
6 Sobic.008G141200 DUF1336 domain containing protein, expressed -
7 Sobic.004G274800 protein transport protein-related, putative, expressed -
8 Sobic.009G151700 protein of unknown function DUF502 domain containing protein, expressed -
9 Sobic.006G267500 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
10 Sobic.009G079100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@serine/threonine-protein kinase, putative, expressed -
11 Sobic.009G246700 CAS1 domain-containing protein 1 precursor, putative, expressed -
12 Sobic.007G139500 phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
13 Sobic.008G174900 IQ calmodulin-binding motif domain containing protein, expressed -
14 Sobic.010G090500 expressed protein -
15 Sobic.010G096100 ras-related protein, putative, expressed K04392: Ras-related C3 botulinum toxin substrate 1
16 Sobic.010G131400 rho GDP-dissociation inhibitor 1, putative, expressed K12462: ARHGDI, Rho GDP-dissociation inhibitor
17 Sobic.004G066900 protein kinase family protein, putative, expressed -
18 Sobic.010G067800 integral membrane transporter family protein, putative, expressed -
19 Sobic.009G226900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin-responsive protein, putative, expressed -
20 Sobic.009G048000 villin, putative, expressed K08017: advillin


Gene co-expression network
sample Sobic007G040301 Sobic007G040301 Sobic009G206500 Sobic009G206500 Sobic007G040301--Sobic009G206500 Sobic001G437500 Sobic001G437500 Sobic007G040301--Sobic001G437500 Sobic009G026101 Sobic009G026101 Sobic007G040301--Sobic009G026101 Sobic001G144200 Sobic001G144200 Sobic007G040301--Sobic001G144200 Sobic001G406700 Sobic001G406700 Sobic007G040301--Sobic001G406700 Sobic008G141200 Sobic008G141200 Sobic007G040301--Sobic008G141200 Sobic004G274800 Sobic004G274800 Sobic007G040301--Sobic004G274800 Sobic009G151700 Sobic009G151700 Sobic007G040301--Sobic009G151700 Sobic006G267500 Sobic006G267500 Sobic007G040301--Sobic006G267500 Sobic007G139500 Sobic007G139500 Sobic009G206500--Sobic007G139500 Sobic010G067800 Sobic010G067800 Sobic009G206500--Sobic010G067800 Sobic009G206500--Sobic006G267500 Sobic009G206500--Sobic001G437500 Sobic009G206500--Sobic001G144200 Sobic009G206500--Sobic007G040301 Sobic002G275500 Sobic002G275500 Sobic009G206500--Sobic002G275500 Sobic009G206500--Sobic009G026101 Sobic001G183600 Sobic001G183600 Sobic009G206500--Sobic001G183600 Sobic001G196000 Sobic001G196000 Sobic001G437500--Sobic001G196000 Sobic004G243800 Sobic004G243800 Sobic001G437500--Sobic004G243800 Sobic001G437500--Sobic004G274800 Sobic001G437500--Sobic009G206500 Sobic001G437500--Sobic007G139500 Sobic001G159800 Sobic001G159800 Sobic001G437500--Sobic001G159800 Sobic009G061000 Sobic009G061000 Sobic001G437500--Sobic009G061000 Sobic001G437500--Sobic006G267500 Sobic002G276600 Sobic002G276600 Sobic001G437500--Sobic002G276600 Sobic001G133900 Sobic001G133900 Sobic009G026101--Sobic001G133900 Sobic009G063400 Sobic009G063400 Sobic009G026101--Sobic009G063400 Sobic009G125900 Sobic009G125900 Sobic009G026101--Sobic009G125900 Sobic009G246700 Sobic009G246700 Sobic009G026101--Sobic009G246700 Sobic009G026101--Sobic009G206500 Sobic002G075500 Sobic002G075500 Sobic009G026101--Sobic002G075500 Sobic006G075000 Sobic006G075000 Sobic009G026101--Sobic006G075000 Sobic003G254700 Sobic003G254700 Sobic009G026101--Sobic003G254700 Sobic010G096100 Sobic010G096100 Sobic009G026101--Sobic010G096100 Sobic001G144200--Sobic009G206500 Sobic010G042600 Sobic010G042600 Sobic001G144200--Sobic010G042600 Sobic001G144200--Sobic010G067800 Sobic005G025900 Sobic005G025900 Sobic001G144200--Sobic005G025900 Sobic001G144200--Sobic002G275500 Sobic002G191000 Sobic002G191000 Sobic001G144200--Sobic002G191000 Sobic004G271500 Sobic004G271500 Sobic001G144200--Sobic004G271500 Sobic001G144200--Sobic007G040301 Sobic003G118100 Sobic003G118100 Sobic001G144200--Sobic003G118100 Sobic003G387500 Sobic003G387500 Sobic001G406700--Sobic003G387500 Sobic006G144600 Sobic006G144600 Sobic001G406700--Sobic006G144600 Sobic001G399200 Sobic001G399200 Sobic001G406700--Sobic001G399200 Sobic009G170500 Sobic009G170500 Sobic001G406700--Sobic009G170500 Sobic010G232500 Sobic010G232500 Sobic001G406700--Sobic010G232500 Sobic002G167600 Sobic002G167600 Sobic001G406700--Sobic002G167600 Sobic005G229100 Sobic005G229100 Sobic001G406700--Sobic005G229100 Sobic007G119500 Sobic007G119500 Sobic001G406700--Sobic007G119500 Sobic001G406700--Sobic009G246700 Sobic003G135400 Sobic003G135400 Sobic008G141200--Sobic003G135400 Sobic008G141200--Sobic009G206500 Sobic003G420100 Sobic003G420100 Sobic008G141200--Sobic003G420100 Sobic009G059500 Sobic009G059500 Sobic008G141200--Sobic009G059500 Sobic003G247600 Sobic003G247600 Sobic008G141200--Sobic003G247600 Sobic010G131400 Sobic010G131400 Sobic008G141200--Sobic010G131400 Sobic009G189200 Sobic009G189200 Sobic008G141200--Sobic009G189200 Sobic009G214100 Sobic009G214100 Sobic008G141200--Sobic009G214100 Sobic004G066900 Sobic004G066900 Sobic008G141200--Sobic004G066900 Sobic004G274800--Sobic001G437500 Sobic006G081000 Sobic006G081000 Sobic004G274800--Sobic006G081000 Sobic004G274800--Sobic007G139500 Sobic004G274800--Sobic001G196000 Sobic004G274800--Sobic009G206500 Sobic003G161500 Sobic003G161500 Sobic004G274800--Sobic003G161500 Sobic004G274800--Sobic009G026101 Sobic004G274800--Sobic007G040301 Sobic004G274800--Sobic003G135400 Sobic009G151700--Sobic006G267500 Sobic009G151700--Sobic009G206500 Sobic003G345200 Sobic003G345200 Sobic009G151700--Sobic003G345200 Sobic009G151700--Sobic007G139500 Sobic009G151700--Sobic009G246700 Sobic009G151700--Sobic007G040301 Sobic009G151700--Sobic009G061000 Sobic002G161700 Sobic002G161700 Sobic009G151700--Sobic002G161700 Sobic009G119700 Sobic009G119700 Sobic009G151700--Sobic009G119700 Sobic006G267500--Sobic009G061000 Sobic006G267500--Sobic009G206500 Sobic009G212100 Sobic009G212100 Sobic006G267500--Sobic009G212100 Sobic006G254500 Sobic006G254500 Sobic006G267500--Sobic006G254500 Sobic006G267500--Sobic001G437500 Sobic004G315700 Sobic004G315700 Sobic006G267500--Sobic004G315700 Sobic010G090500 Sobic010G090500 Sobic006G267500--Sobic010G090500 Sobic005G204700 Sobic005G204700 Sobic006G267500--Sobic005G204700 Sobic001G296800 Sobic001G296800 Sobic006G267500--Sobic001G296800
Octagon: transcription factors


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