Gene annotation
Transcriptome id Sobic.009G246700.1
Synonym Sb09g029750
Functional annotation CAS1 domain-containing protein 1 precursor, putative, expressed
UniProt C5YWH1
Pfam PF07779
Panther DB PTHR13533 PTHR13533:SF11
NCBI CDD KOG1699; O-acetyltransferase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G34410 : O-acetyltransferase family protein
RAP-DB (Rice) LOC_Os05g50510.1 : CAS1 domain-containing protein 1 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a012195 , Zm00025a044723 , Zm00025a036720
Brachypodium PNT77526 , KQK21952 , KQK04690 , PNT77527 , KQK04691
Barley HORVU4Hr1G052720.12 , HORVU1Hr1G091870.3 , HORVU1Hr1G091870.1 , HORVU4Hr1G052720.14 , HORVU4Hr1G052720.16 , HORVU4Hr1G052720.17 , HORVU1Hr1G091870.2 , HORVU4Hr1G052720.15 , HORVU1Hr1G091870.4 , HORVU1Hr1G091870.5 , HORVU4Hr1G052720.10 , HORVU1Hr1G091870.7 , HORVU1Hr1G091870.8 , HORVU1Hr1G091870.9 , HORVU4Hr1G052720.18 , HORVU4Hr1G052720.13 , HORVU1Hr1G091870.6 , HORVU4Hr1G052720.11 , HORVU4Hr1G052720.4 , HORVU4Hr1G052720.5 , HORVU4Hr1G052720.6 , HORVU4Hr1G052720.7 , HORVU4Hr1G052720.1 , HORVU4Hr1G052720.2 , HORVU4Hr1G052720.3 , HORVU4Hr1G052720.8 , HORVU4Hr1G052720.9 , HORVU4Hr1G052720.21 , HORVU4Hr1G052720.20 , HORVU4Hr1G052720.19
Wheat TraesCS4A02G124300 , TraesCS4A02G124300 , TraesCS4A02G124300 , TraesCS5A02G507600 , TraesCS1D02G428700 , TraesCS4B02G337600 , TraesCS4B02G337600 , TraesCS4D02G332900 , TraesCS1A02G420800 , TraesCS1A02G420800 , TraesCS1B02G452000 , TraesCS1B02G452000
Populus -


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cDNA sequences
Sobic.009G246700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G133900 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
2 Sobic.009G026101 - -
3 Sobic.001G406700 expressed protein -
4 Sobic.007G119500 expressed protein -
5 Sobic.001G072600 expressed protein -
6 Sobic.002G167600 2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
7 Sobic.001G360700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K13083: flavonoid 3',5'-hydroxylase
8 Sobic.001G460400 expressed protein -
9 Sobic.006G144600 ARPC2B, putative, expressed K05758: actin related protein 2/3 complex, subunit 2
10 Sobic.003G254700 glycosyltransferase family 43 protein, putative, expressed -
11 Sobic.009G206500 respiratory burst oxidase, putative, expressed K13447: respiratory burst oxidase
12 Sobic.002G207200 - -
13 Sobic.009G170500 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
14 Sobic.010G180100 transferase family protein, putative, expressed -
15 Sobic.006G243500 alpha-N-acetylglucosaminidase, putative, expressed K01205: alpha-N-acetylglucosaminidase
16 Sobic.001G399200 kinesin motor domain containing protein, expressed K10406: kinesin family member C2/C3
17 Sobic.010G232500 peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.007G047300 encodes the lignin biosynthetic enzyme caffeic acid O-methyltransferase (COMT)(PubMedID : 20585750)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methylate the tricin precursors luteolin and selgin(PubMedID : 28594846)@monolignol biosynthetic enzyme caffeic acid O-methyl transferase (COMT)(PubMedID : 12756532)@lignin biosynthesis(PubMedID : 12756532)@key enzymes in the phenylptropanoid pathway(PubMedID : 28119720)@O-methyltransferase, putative, expressed K05279: flavonol 3-O-methyltransferase
19 Sobic.009G151700 protein of unknown function DUF502 domain containing protein, expressed -
20 Sobic.004G047600 plant-specific domain TIGR01627 family protein, expressed -


Gene co-expression network
sample Sobic009G246700 Sobic009G246700 Sobic001G133900 Sobic001G133900 Sobic009G246700--Sobic001G133900 Sobic009G026101 Sobic009G026101 Sobic009G246700--Sobic009G026101 Sobic001G406700 Sobic001G406700 Sobic009G246700--Sobic001G406700 Sobic007G119500 Sobic007G119500 Sobic009G246700--Sobic007G119500 Sobic001G072600 Sobic001G072600 Sobic009G246700--Sobic001G072600 Sobic002G167600 Sobic002G167600 Sobic009G246700--Sobic002G167600 Sobic001G360700 Sobic001G360700 Sobic009G246700--Sobic001G360700 Sobic001G460400 Sobic001G460400 Sobic009G246700--Sobic001G460400 Sobic006G144600 Sobic006G144600 Sobic009G246700--Sobic006G144600 Sobic001G133900--Sobic009G026101 Sobic001G133900--Sobic009G246700 Sobic004G007600 Sobic004G007600 Sobic001G133900--Sobic004G007600 Sobic003G254700 Sobic003G254700 Sobic001G133900--Sobic003G254700 Sobic010G180100 Sobic010G180100 Sobic001G133900--Sobic010G180100 Sobic004G111100 Sobic004G111100 Sobic001G133900--Sobic004G111100 Sobic002G075500 Sobic002G075500 Sobic001G133900--Sobic002G075500 Sobic009G079100 Sobic009G079100 Sobic001G133900--Sobic009G079100 Sobic009G125900 Sobic009G125900 Sobic001G133900--Sobic009G125900 Sobic009G026101--Sobic001G133900 Sobic009G063400 Sobic009G063400 Sobic009G026101--Sobic009G063400 Sobic009G026101--Sobic009G125900 Sobic009G026101--Sobic009G246700 Sobic009G206500 Sobic009G206500 Sobic009G026101--Sobic009G206500 Sobic009G026101--Sobic002G075500 Sobic006G075000 Sobic006G075000 Sobic009G026101--Sobic006G075000 Sobic009G026101--Sobic003G254700 Sobic010G096100 Sobic010G096100 Sobic009G026101--Sobic010G096100 Sobic003G387500 Sobic003G387500 Sobic001G406700--Sobic003G387500 Sobic001G406700--Sobic006G144600 Sobic001G399200 Sobic001G399200 Sobic001G406700--Sobic001G399200 Sobic009G170500 Sobic009G170500 Sobic001G406700--Sobic009G170500 Sobic010G232500 Sobic010G232500 Sobic001G406700--Sobic010G232500 Sobic001G406700--Sobic002G167600 Sobic005G229100 Sobic005G229100 Sobic001G406700--Sobic005G229100 Sobic001G406700--Sobic007G119500 Sobic001G406700--Sobic009G246700 Sobic007G119500--Sobic009G170500 Sobic003G270400 Sobic003G270400 Sobic007G119500--Sobic003G270400 Sobic004G047600 Sobic004G047600 Sobic007G119500--Sobic004G047600 Sobic007G119500--Sobic001G072600 Sobic007G119500--Sobic002G167600 Sobic003G378800 Sobic003G378800 Sobic007G119500--Sobic003G378800 Sobic007G119500--Sobic001G360700 Sobic007G119500--Sobic006G144600 Sobic007G119500--Sobic001G406700 Sobic001G072600--Sobic002G167600 Sobic002G218900 Sobic002G218900 Sobic001G072600--Sobic002G218900 Sobic001G072600--Sobic007G119500 Sobic001G072600--Sobic001G360700 Sobic001G072600--Sobic004G047600 Sobic001G072600--Sobic006G144600 Sobic001G072600--Sobic009G246700 Sobic007G047300 Sobic007G047300 Sobic001G072600--Sobic007G047300 Sobic001G072600--Sobic009G170500 Sobic002G167600--Sobic001G360700 Sobic002G167600--Sobic006G144600 Sobic002G167600--Sobic004G047600 Sobic002G167600--Sobic001G406700 Sobic002G203900 Sobic002G203900 Sobic002G167600--Sobic002G203900 Sobic002G167600--Sobic009G170500 Sobic002G254900 Sobic002G254900 Sobic002G167600--Sobic002G254900 Sobic002G167600--Sobic001G072600 Sobic002G167600--Sobic010G180100 Sobic001G360700--Sobic004G047600 Sobic001G360700--Sobic007G047300 Sobic001G360700--Sobic002G167600 Sobic001G360700--Sobic002G203900 Sobic001G471800 Sobic001G471800 Sobic001G360700--Sobic001G471800 Sobic001G360700--Sobic002G254900 Sobic002G146000 Sobic002G146000 Sobic001G360700--Sobic002G146000 Sobic004G193500 Sobic004G193500 Sobic001G360700--Sobic004G193500 Sobic001G360700--Sobic001G072600 Sobic001G460400--Sobic001G360700 Sobic001G067800 Sobic001G067800 Sobic001G460400--Sobic001G067800 Sobic004G161900 Sobic004G161900 Sobic001G460400--Sobic004G161900 Sobic003G017601 Sobic003G017601 Sobic001G460400--Sobic003G017601 Sobic002G207200 Sobic002G207200 Sobic001G460400--Sobic002G207200 Sobic001G227850 Sobic001G227850 Sobic001G460400--Sobic001G227850 Sobic001G460400--Sobic009G246700 Sobic008G037900 Sobic008G037900 Sobic001G460400--Sobic008G037900 Sobic010G218300 Sobic010G218300 Sobic001G460400--Sobic010G218300 Sobic006G144600--Sobic001G406700 Sobic006G144600--Sobic010G232500 Sobic006G144600--Sobic003G387500 Sobic006G144600--Sobic002G167600 Sobic006G144600--Sobic009G170500 Sobic006G144600--Sobic001G399200 Sobic006G144600--Sobic005G229100 Sobic006G144600--Sobic007G119500 Sobic007G223600 Sobic007G223600 Sobic006G144600--Sobic007G223600
Octagon: transcription factors


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