Gene annotation
Transcriptome id Sobic.010G180100.1
Synonym Sb10g023160
Functional annotation transferase family protein, putative, expressed
UniProt C5Z598
Pfam PF02458
Panther DB PTHR31147 PTHR31147:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016747; transferase activity, transferring acyl groups other than amino-acyl groups


Orthologs (automatic annotation)
TAIR AT3G62160 : HXXXD-type acyl-transferase family protein
RAP-DB (Rice) LOC_Os06g39470.1 : transferase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a037059 , Zm00025a043028 , Zm00025a023184 , Zm00025a051241 , Zm00025a035758
Brachypodium PNT61474 , KQK17829 , KQK03008 , KQK03007
Barley HORVU1Hr1G026520.1 , HORVU1Hr1G026520.2 , HORVU3Hr1G022260.1 , HORVU3Hr1G022260.2 , HORVU7Hr1G085060.1 , HORVU7Hr1G085060.2 , HORVU7Hr1G085060.3 , HORVU7Hr1G085060.4
Wheat TraesCS7B02G257000 , TraesCS7D02G352200 , TraesCS3D02G121600 , TraesCS1A02G119100 , TraesCS7A02G370700 , TraesCS1D02G120000
Populus -


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cDNA sequences
Sobic.010G180100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G131400 rho GDP-dissociation inhibitor 1, putative, expressed K12462: ARHGDI, Rho GDP-dissociation inhibitor
2 Sobic.002G254900 membrane protein, putative, expressed -
3 Sobic.002G167600 2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
4 Sobic.001G360700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K13083: flavonoid 3',5'-hydroxylase
5 Sobic.001G002800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
6 Sobic.001G224300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@-(PubMedID : 28944535)@CESA7 - cellulose synthase, expressed K10999: cellulose synthase A
7 Sobic.001G409100 glycosyltransferase family 43 protein, putative, expressed -
8 Sobic.004G047600 plant-specific domain TIGR01627 family protein, expressed -
9 Sobic.003G387500 IQ calmodulin-binding motif domain containing protein, expressed -
10 Sobic.009G034300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
11 Sobic.002G203900 methyladenine glycosylase, putative, expressed K01246: DNA-3-methyladenine glycosylase I
12 Sobic.001G406700 expressed protein -
13 Sobic.001G008900 - -
14 Sobic.001G133900 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
15 Sobic.007G047300 encodes the lignin biosynthetic enzyme caffeic acid O-methyltransferase (COMT)(PubMedID : 20585750)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methylate the tricin precursors luteolin and selgin(PubMedID : 28594846)@monolignol biosynthetic enzyme caffeic acid O-methyl transferase (COMT)(PubMedID : 12756532)@lignin biosynthesis(PubMedID : 12756532)@key enzymes in the phenylptropanoid pathway(PubMedID : 28119720)@O-methyltransferase, putative, expressed K05279: flavonol 3-O-methyltransferase
16 Sobic.006G144600 ARPC2B, putative, expressed K05758: actin related protein 2/3 complex, subunit 2
17 Sobic.009G026101 - -
18 Sobic.001G360800 cytochrome P450, putative, expressed K13083: flavonoid 3',5'-hydroxylase
19 Sobic.006G180300 ethylene-responsive protein related, putative, expressed -
20 Sobic.004G221300 transporter-related, putative, expressed K15285: solute carrier family 35, member E3


Gene co-expression network
sample Sobic010G180100 Sobic010G180100 Sobic010G131400 Sobic010G131400 Sobic010G180100--Sobic010G131400 Sobic002G254900 Sobic002G254900 Sobic010G180100--Sobic002G254900 Sobic002G167600 Sobic002G167600 Sobic010G180100--Sobic002G167600 Sobic001G360700 Sobic001G360700 Sobic010G180100--Sobic001G360700 Sobic001G002800 Sobic001G002800 Sobic010G180100--Sobic001G002800 Sobic001G224300 Sobic001G224300 Sobic010G180100--Sobic001G224300 Sobic001G409100 Sobic001G409100 Sobic010G180100--Sobic001G409100 Sobic004G047600 Sobic004G047600 Sobic010G180100--Sobic004G047600 Sobic003G387500 Sobic003G387500 Sobic010G180100--Sobic003G387500 Sobic010G131400--Sobic010G180100 Sobic010G131400--Sobic002G254900 Sobic010G131400--Sobic001G360700 Sobic010G131400--Sobic001G002800 Sobic010G131400--Sobic002G167600 Sobic006G180300 Sobic006G180300 Sobic010G131400--Sobic006G180300 Sobic002G271300 Sobic002G271300 Sobic010G131400--Sobic002G271300 Sobic008G141200 Sobic008G141200 Sobic010G131400--Sobic008G141200 Sobic001G406700 Sobic001G406700 Sobic010G131400--Sobic001G406700 Sobic002G254900--Sobic001G002800 Sobic010G096700 Sobic010G096700 Sobic002G254900--Sobic010G096700 Sobic002G254900--Sobic010G180100 Sobic002G254900--Sobic004G047600 Sobic002G254900--Sobic001G360700 Sobic001G503000 Sobic001G503000 Sobic002G254900--Sobic001G503000 Sobic001G506600 Sobic001G506600 Sobic002G254900--Sobic001G506600 Sobic007G090472 Sobic007G090472 Sobic002G254900--Sobic007G090472 Sobic002G254900--Sobic002G167600 Sobic002G167600--Sobic001G360700 Sobic006G144600 Sobic006G144600 Sobic002G167600--Sobic006G144600 Sobic002G167600--Sobic004G047600 Sobic002G167600--Sobic001G406700 Sobic002G203900 Sobic002G203900 Sobic002G167600--Sobic002G203900 Sobic009G170500 Sobic009G170500 Sobic002G167600--Sobic009G170500 Sobic002G167600--Sobic002G254900 Sobic001G072600 Sobic001G072600 Sobic002G167600--Sobic001G072600 Sobic002G167600--Sobic010G180100 Sobic001G360700--Sobic004G047600 Sobic007G047300 Sobic007G047300 Sobic001G360700--Sobic007G047300 Sobic001G360700--Sobic002G167600 Sobic001G360700--Sobic002G203900 Sobic001G471800 Sobic001G471800 Sobic001G360700--Sobic001G471800 Sobic001G360700--Sobic002G254900 Sobic002G146000 Sobic002G146000 Sobic001G360700--Sobic002G146000 Sobic004G193500 Sobic004G193500 Sobic001G360700--Sobic004G193500 Sobic001G360700--Sobic001G072600 Sobic001G002800--Sobic002G254900 Sobic001G002800--Sobic001G503000 Sobic001G002800--Sobic007G090472 Sobic003G287200 Sobic003G287200 Sobic001G002800--Sobic003G287200 Sobic005G107500 Sobic005G107500 Sobic001G002800--Sobic005G107500 Sobic006G209000 Sobic006G209000 Sobic001G002800--Sobic006G209000 Sobic001G002800--Sobic010G096700 Sobic007G073000 Sobic007G073000 Sobic001G002800--Sobic007G073000 Sobic001G002800--Sobic001G506600 Sobic003G296400 Sobic003G296400 Sobic001G224300--Sobic003G296400 Sobic002G205500 Sobic002G205500 Sobic001G224300--Sobic002G205500 Sobic006G036400 Sobic006G036400 Sobic001G224300--Sobic006G036400 Sobic001G224300--Sobic003G387500 Sobic009G226900 Sobic009G226900 Sobic001G224300--Sobic009G226900 Sobic007G223600 Sobic007G223600 Sobic001G224300--Sobic007G223600 Sobic009G034300 Sobic009G034300 Sobic001G224300--Sobic009G034300 Sobic004G221300 Sobic004G221300 Sobic001G224300--Sobic004G221300 Sobic001G224300--Sobic001G409100 Sobic002G396400 Sobic002G396400 Sobic001G409100--Sobic002G396400 Sobic003G410800 Sobic003G410800 Sobic001G409100--Sobic003G410800 Sobic001G409100--Sobic004G221300 Sobic001G409100--Sobic006G036400 Sobic001G418100 Sobic001G418100 Sobic001G409100--Sobic001G418100 Sobic001G409100--Sobic001G224300 Sobic001G038300 Sobic001G038300 Sobic001G409100--Sobic001G038300 Sobic001G409100--Sobic010G180100 Sobic009G220100 Sobic009G220100 Sobic001G409100--Sobic009G220100 Sobic004G047600--Sobic001G360700 Sobic003G352700 Sobic003G352700 Sobic004G047600--Sobic003G352700 Sobic004G047600--Sobic007G047300 Sobic004G047600--Sobic001G471800 Sobic004G047600--Sobic002G146000 Sobic004G047600--Sobic002G167600 Sobic004G047600--Sobic002G254900 Sobic004G047600--Sobic002G203900 Sobic009G162300 Sobic009G162300 Sobic004G047600--Sobic009G162300 Sobic003G387500--Sobic001G406700 Sobic003G387500--Sobic006G144600 Sobic003G387500--Sobic001G224300 Sobic010G232500 Sobic010G232500 Sobic003G387500--Sobic010G232500 Sobic003G387500--Sobic002G167600 Sobic003G387500--Sobic009G170500 Sobic009G162700 Sobic009G162700 Sobic003G387500--Sobic009G162700 Sobic003G387500--Sobic002G205500 Sobic003G387500--Sobic009G226900
Octagon: transcription factors


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