Gene annotation
Transcriptome id Sobic.006G194500.1
Synonym Sb06g026730
Functional annotation expressed protein
UniProt C5YEN2
Pfam -
Panther DB PTHR21068 PTHR21068:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G35980 : -
RAP-DB (Rice) LOC_Os05g28480.1 : expressed protein
MaizeGDB (Corn) Zm00025a056706
Brachypodium KQJ92320 , KQJ92318 , KQJ92319
Barley HORVU1Hr1G060150.4 , HORVU1Hr1G060150.3 , HORVU1Hr1G060150.2 , HORVU1Hr1G060150.1
Wheat TraesCS1B02G236300 , TraesCS1D02G224600 , TraesCS1A02G223000
Populus -


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cDNA sequences
Sobic.006G194500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G323000 UBX domain-containing protein, putative, expressed K18726: FAF2, FAS-associated factor 2
2 Sobic.009G228700 expressed protein -
3 Sobic.010G130000 expressed protein K12199: VTA1, vacuolar protein sorting-associated protein VTA1
4 Sobic.009G138100 disease resistance protein RGA3, putative, expressed -
5 Sobic.002G352600 expressed protein -
6 Sobic.006G148200 glycosyl transferase 8 domain containing protein, putative, expressed -
7 Sobic.001G466700 peptidyl-prolyl cis-trans isomerase, putative, expressed K10598: PPIL2, CYC4, peptidyl-prolyl cis-trans isomerase-like 2
8 Sobic.002G418700 expressed protein -
9 Sobic.006G249700 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
10 Sobic.006G034000 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
11 Sobic.001G085100 expressed protein -
12 Sobic.001G124200 ethylene receptor, putative, expressed K14509: ETR, ethylene receptor
13 Sobic.001G127000 alkaline phytoceramidase, putative, expressed K04711: ACER3, dihydroceramidase
14 Sobic.004G003401 - -
15 Sobic.002G132300 Ser/Thr protein phosphatase family protein, putative, expressed K01517: manganese-dependent ADP-ribose/CDP-alcohol diphosphatase
16 Sobic.001G430800 GA17271-PA, putative, expressed -
17 Sobic.006G119800 leucine rich repeat containing protein, expressed -
18 Sobic.006G225600 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
19 Sobic.001G117300 expressed protein -
20 Sobic.003G053800 WD40-like domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic006G194500 Sobic006G194500 Sobic001G323000 Sobic001G323000 Sobic006G194500--Sobic001G323000 Sobic009G228700 Sobic009G228700 Sobic006G194500--Sobic009G228700 Sobic010G130000 Sobic010G130000 Sobic006G194500--Sobic010G130000 Sobic009G138100 Sobic009G138100 Sobic006G194500--Sobic009G138100 Sobic002G352600 Sobic002G352600 Sobic006G194500--Sobic002G352600 Sobic006G148200 Sobic006G148200 Sobic006G194500--Sobic006G148200 Sobic001G466700 Sobic001G466700 Sobic006G194500--Sobic001G466700 Sobic002G418700 Sobic002G418700 Sobic006G194500--Sobic002G418700 Sobic006G249700 Sobic006G249700 Sobic006G194500--Sobic006G249700 Sobic001G206900 Sobic001G206900 Sobic001G323000--Sobic001G206900 Sobic006G034000 Sobic006G034000 Sobic001G323000--Sobic006G034000 Sobic001G323000--Sobic009G228700 Sobic001G057800 Sobic001G057800 Sobic001G323000--Sobic001G057800 Sobic003G312200 Sobic003G312200 Sobic001G323000--Sobic003G312200 Sobic001G323000--Sobic006G148200 Sobic009G207000 Sobic009G207000 Sobic001G323000--Sobic009G207000 Sobic010G000900 Sobic010G000900 Sobic001G323000--Sobic010G000900 Sobic001G085100 Sobic001G085100 Sobic001G323000--Sobic001G085100 Sobic004G066200 Sobic004G066200 Sobic009G228700--Sobic004G066200 Sobic009G228700--Sobic009G207000 Sobic001G091300 Sobic001G091300 Sobic009G228700--Sobic001G091300 Sobic009G228700--Sobic001G323000 Sobic001G356600 Sobic001G356600 Sobic009G228700--Sobic001G356600 Sobic009G228700--Sobic006G249700 Sobic009G228700--Sobic006G148200 Sobic009G228700--Sobic003G312200 Sobic001G124200 Sobic001G124200 Sobic009G228700--Sobic001G124200 Sobic006G033200 Sobic006G033200 Sobic010G130000--Sobic006G033200 Sobic010G278200 Sobic010G278200 Sobic010G130000--Sobic010G278200 Sobic010G130000--Sobic009G138100 Sobic010G130000--Sobic006G034000 Sobic010G130000--Sobic003G312200 Sobic010G130000--Sobic001G124200 Sobic001G390800 Sobic001G390800 Sobic010G130000--Sobic001G390800 Sobic010G130000--Sobic001G085100 Sobic008G124900 Sobic008G124900 Sobic010G130000--Sobic008G124900 Sobic009G138100--Sobic010G278200 Sobic009G138100--Sobic010G130000 Sobic003G248200 Sobic003G248200 Sobic009G138100--Sobic003G248200 Sobic009G138100--Sobic001G124200 Sobic009G138100--Sobic006G033200 Sobic009G138100--Sobic009G228700 Sobic009G138100--Sobic004G066200 Sobic009G219000 Sobic009G219000 Sobic009G138100--Sobic009G219000 Sobic009G138100--Sobic001G323000 Sobic003G015900 Sobic003G015900 Sobic002G352600--Sobic003G015900 Sobic010G027600 Sobic010G027600 Sobic002G352600--Sobic010G027600 Sobic002G352600--Sobic009G228700 Sobic004G121100 Sobic004G121100 Sobic002G352600--Sobic004G121100 Sobic009G217100 Sobic009G217100 Sobic002G352600--Sobic009G217100 Sobic001G121200 Sobic001G121200 Sobic002G352600--Sobic001G121200 Sobic002G352600--Sobic010G000900 Sobic002G352600--Sobic004G066200 Sobic002G352600--Sobic003G248200 Sobic004G274400 Sobic004G274400 Sobic006G148200--Sobic004G274400 Sobic006G148200--Sobic001G085100 Sobic006G148200--Sobic006G034000 Sobic006G148200--Sobic001G323000 Sobic006G148200--Sobic009G228700 Sobic001G033500 Sobic001G033500 Sobic006G148200--Sobic001G033500 Sobic006G148200--Sobic001G206900 Sobic006G148200--Sobic010G000900 Sobic001G048700 Sobic001G048700 Sobic006G148200--Sobic001G048700 Sobic006G252700 Sobic006G252700 Sobic001G466700--Sobic006G252700 Sobic003G081000 Sobic003G081000 Sobic001G466700--Sobic003G081000 Sobic001G143500 Sobic001G143500 Sobic001G466700--Sobic001G143500 Sobic002G388200 Sobic002G388200 Sobic001G466700--Sobic002G388200 Sobic001G371200 Sobic001G371200 Sobic001G466700--Sobic001G371200 Sobic004G021100 Sobic004G021100 Sobic001G466700--Sobic004G021100 Sobic007G119200 Sobic007G119200 Sobic001G466700--Sobic007G119200 Sobic009G056800 Sobic009G056800 Sobic001G466700--Sobic009G056800 Sobic007G118200 Sobic007G118200 Sobic001G466700--Sobic007G118200 Sobic002G418700--Sobic001G323000 Sobic002G418700--Sobic006G194500 Sobic001G117300 Sobic001G117300 Sobic002G418700--Sobic001G117300 Sobic002G418700--Sobic003G312200 Sobic007G077400 Sobic007G077400 Sobic002G418700--Sobic007G077400 Sobic002G418700--Sobic001G143500 Sobic002G418700--Sobic009G228700 Sobic002G418700--Sobic001G085100 Sobic004G059000 Sobic004G059000 Sobic002G418700--Sobic004G059000 Sobic006G249700--Sobic009G228700 Sobic006G249700--Sobic009G207000 Sobic004G348300 Sobic004G348300 Sobic006G249700--Sobic004G348300 Sobic006G249700--Sobic003G312200 Sobic006G249700--Sobic002G352600 Sobic004G275700 Sobic004G275700 Sobic006G249700--Sobic004G275700 Sobic006G249700--Sobic001G323000 Sobic006G249700--Sobic006G148200 Sobic006G249700--Sobic009G138100
Octagon: transcription factors


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