Gene annotation
Transcriptome id Sobic.006G157100.1
Synonym Sb06g023400, DES-1-LIKE
Functional annotation sphingolipid delta desaturase, putative, expressed
UniProt C5YCK8
Pfam PF08557 PF00487
Panther DB PTHR12879
NCBI CDD -
KEGG Orthology K04712; sphingolipid 4-desaturase/C4-monooxygenase
Gene Ontology GO:0006629; lipid metabolic process


Orthologs (automatic annotation)
TAIR AT4G04930 : fatty acid desaturase family protein
RAP-DB (Rice) LOC_Os02g42660.1 : sphingolipid delta desaturase, putative, expressed
MaizeGDB (Corn) Zm00025a010462
Brachypodium KQJ83732
Barley -
Wheat TraesCS2B02G389900 , TraesCS2D02G369100 , TraesCS2A02G372900
Populus -


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cDNA sequences
Sobic.006G157100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G530100 hydroxymethylglutaryl-CoA synthase, putative, expressed K01641: hydroxymethylglutaryl-CoA synthase
2 Sobic.008G059900 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K00627: DLAT, aceF, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
3 Sobic.010G197200 peroxiredoxin, putative, expressed -
4 Sobic.003G179000 dienelactone hydrolase family protein, expressed K01061: carboxymethylenebutenolidase
5 Sobic.004G253500 auxin-independent growth promoter protein, putative, expressed -
6 Sobic.003G148400 Pectinesterase 1 (Precursor)(PubMedID : 26186930)@pectinesterase, putative, expressed K01051: pectinesterase
7 Sobic.007G079600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@FabA-like domain containing protein, expressed K02372: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase
8 Sobic.004G129100 lipase class 3 family protein, putative, expressed -
9 Sobic.007G112100 enoyl-acyl-carrier-protein reductase NADH, chloroplast precursor, expressed K00208: enoyl-[acyl-carrier protein] reductase I
10 Sobic.010G073500 3-oxoacyl-synthase, putative, expressed K09458: fabF, OXSM, 3-oxoacyl-[acyl-carrier-protein] synthase II
11 Sobic.007G134800 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K00627: DLAT, aceF, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
12 Sobic.002G304400 expressed protein -
13 Sobic.003G102700 exostosin family protein, putative, expressed -
14 Sobic.001G518600 fatty acid hydroxylase, putative, expressed K14424: plant 4alpha-monomethylsterol monooxygenase
15 Sobic.008G075200 2-dehydro-3-deoxyphosphooctonate aldolase, putative, expressed K01627: 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase)
16 Sobic.003G223100 polygalacturonase, putative, expressed -
17 Sobic.010G125100 39S ribosomal protein L46, mitochondrial precursor, putative, expressed K17427: large subunit ribosomal protein L46
18 Sobic.001G167500 ribosomal protein L25, putative, expressed K02897: RP-L25, large subunit ribosomal protein L25
19 Sobic.003G278400 DUF581 domain containing protein, expressed -
20 Sobic.004G296300 amino acid permease, putative, expressed K03294: basic amino acid/polyamine antiporter, APA family


Gene co-expression network
sample Sobic006G157100 Sobic006G157100 Sobic001G530100 Sobic001G530100 Sobic006G157100--Sobic001G530100 Sobic008G059900 Sobic008G059900 Sobic006G157100--Sobic008G059900 Sobic010G197200 Sobic010G197200 Sobic006G157100--Sobic010G197200 Sobic003G179000 Sobic003G179000 Sobic006G157100--Sobic003G179000 Sobic004G253500 Sobic004G253500 Sobic006G157100--Sobic004G253500 Sobic003G148400 Sobic003G148400 Sobic006G157100--Sobic003G148400 Sobic007G079600 Sobic007G079600 Sobic006G157100--Sobic007G079600 Sobic004G129100 Sobic004G129100 Sobic006G157100--Sobic004G129100 Sobic007G112100 Sobic007G112100 Sobic006G157100--Sobic007G112100 Sobic003G045450 Sobic003G045450 Sobic001G530100--Sobic003G045450 Sobic009G081800 Sobic009G081800 Sobic001G530100--Sobic009G081800 Sobic001G530100--Sobic010G197200 Sobic004G291200 Sobic004G291200 Sobic001G530100--Sobic004G291200 Sobic003G147500 Sobic003G147500 Sobic001G530100--Sobic003G147500 Sobic003G102700 Sobic003G102700 Sobic001G530100--Sobic003G102700 Sobic003G326500 Sobic003G326500 Sobic001G530100--Sobic003G326500 Sobic001G530100--Sobic007G112100 Sobic007G219100 Sobic007G219100 Sobic001G530100--Sobic007G219100 Sobic008G059900--Sobic010G197200 Sobic005G031000 Sobic005G031000 Sobic008G059900--Sobic005G031000 Sobic001G199500 Sobic001G199500 Sobic008G059900--Sobic001G199500 Sobic008G059900--Sobic004G253500 Sobic010G073500 Sobic010G073500 Sobic008G059900--Sobic010G073500 Sobic008G059900--Sobic003G102700 Sobic006G071628 Sobic006G071628 Sobic008G059900--Sobic006G071628 Sobic006G237000 Sobic006G237000 Sobic008G059900--Sobic006G237000 Sobic003G392100 Sobic003G392100 Sobic008G059900--Sobic003G392100 Sobic010G197200--Sobic008G059900 Sobic010G197200--Sobic001G530100 Sobic001G167500 Sobic001G167500 Sobic010G197200--Sobic001G167500 Sobic010G197200--Sobic009G081800 Sobic006G127200 Sobic006G127200 Sobic010G197200--Sobic006G127200 Sobic010G197200--Sobic005G031000 Sobic002G426100 Sobic002G426100 Sobic010G197200--Sobic002G426100 Sobic002G125800 Sobic002G125800 Sobic010G197200--Sobic002G125800 Sobic006G126800 Sobic006G126800 Sobic010G197200--Sobic006G126800 Sobic007G134800 Sobic007G134800 Sobic003G179000--Sobic007G134800 Sobic007G220900 Sobic007G220900 Sobic003G179000--Sobic007G220900 Sobic003G179000--Sobic007G112100 Sobic002G304400 Sobic002G304400 Sobic003G179000--Sobic002G304400 Sobic002G101000 Sobic002G101000 Sobic003G179000--Sobic002G101000 Sobic001G460100 Sobic001G460100 Sobic003G179000--Sobic001G460100 Sobic009G052600 Sobic009G052600 Sobic003G179000--Sobic009G052600 Sobic003G179000--Sobic006G157100 Sobic001G397000 Sobic001G397000 Sobic003G179000--Sobic001G397000 Sobic003G078300 Sobic003G078300 Sobic004G253500--Sobic003G078300 Sobic001G461800 Sobic001G461800 Sobic004G253500--Sobic001G461800 Sobic003G250000 Sobic003G250000 Sobic004G253500--Sobic003G250000 Sobic003G259500 Sobic003G259500 Sobic004G253500--Sobic003G259500 Sobic004G253500--Sobic008G059900 Sobic003G024000 Sobic003G024000 Sobic004G253500--Sobic003G024000 Sobic009G002900 Sobic009G002900 Sobic004G253500--Sobic009G002900 Sobic004G253500--Sobic001G199500 Sobic004G253500--Sobic003G102700 Sobic001G379100 Sobic001G379100 Sobic003G148400--Sobic001G379100 Sobic003G148400--Sobic003G250000 Sobic003G148400--Sobic004G253500 Sobic001G164500 Sobic001G164500 Sobic003G148400--Sobic001G164500 Sobic010G096200 Sobic010G096200 Sobic003G148400--Sobic010G096200 Sobic002G225000 Sobic002G225000 Sobic003G148400--Sobic002G225000 Sobic003G148400--Sobic003G259500 Sobic003G148400--Sobic009G002900 Sobic008G075200 Sobic008G075200 Sobic003G148400--Sobic008G075200 Sobic004G355500 Sobic004G355500 Sobic007G079600--Sobic004G355500 Sobic010G103700 Sobic010G103700 Sobic007G079600--Sobic010G103700 Sobic009G088200 Sobic009G088200 Sobic007G079600--Sobic009G088200 Sobic007G079600--Sobic007G112100 Sobic006G051000 Sobic006G051000 Sobic007G079600--Sobic006G051000 Sobic003G179500 Sobic003G179500 Sobic007G079600--Sobic003G179500 Sobic001G103000 Sobic001G103000 Sobic007G079600--Sobic001G103000 Sobic003G183700 Sobic003G183700 Sobic007G079600--Sobic003G183700 Sobic007G139500 Sobic007G139500 Sobic007G079600--Sobic007G139500 Sobic003G028200 Sobic003G028200 Sobic004G129100--Sobic003G028200 Sobic002G281600 Sobic002G281600 Sobic004G129100--Sobic002G281600 Sobic001G518600 Sobic001G518600 Sobic004G129100--Sobic001G518600 Sobic001G011000 Sobic001G011000 Sobic004G129100--Sobic001G011000 Sobic002G186300 Sobic002G186300 Sobic004G129100--Sobic002G186300 Sobic004G265600 Sobic004G265600 Sobic004G129100--Sobic004G265600 Sobic008G085400 Sobic008G085400 Sobic004G129100--Sobic008G085400 Sobic002G166400 Sobic002G166400 Sobic004G129100--Sobic002G166400 Sobic005G129201 Sobic005G129201 Sobic004G129100--Sobic005G129201 Sobic009G109300 Sobic009G109300 Sobic007G112100--Sobic009G109300 Sobic001G532800 Sobic001G532800 Sobic007G112100--Sobic001G532800 Sobic004G032900 Sobic004G032900 Sobic007G112100--Sobic004G032900 Sobic002G158500 Sobic002G158500 Sobic007G112100--Sobic002G158500 Sobic002G236700 Sobic002G236700 Sobic007G112100--Sobic002G236700 Sobic006G120600 Sobic006G120600 Sobic007G112100--Sobic006G120600 Sobic001G140700 Sobic001G140700 Sobic007G112100--Sobic001G140700 Sobic007G112100--Sobic002G304400 Sobic007G112100--Sobic007G079600
Octagon: transcription factors


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