Gene annotation
Transcriptome id Sobic.004G351700.1
Synonym Sb04g037850
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
ZOS2-19 - C2H2 zinc finger protein, expressed
UniProt C5XWL0
Pfam PF13912
Panther DB PTHR26374 PTHR26374:SF179
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G10470 : C2H2-type zinc finger family protein
RAP-DB (Rice) LOC_Os02g57790.1 : ZOS2-19 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) Zm00025a021387 , Zm00025a012288 , Zm00025a039697 , Zm00025a041663
Brachypodium KQK14433 , PNT67863 , KQK15405
Barley HORVU2Hr1G122100.1 , HORVU6Hr1G092750.1 , HORVU5Hr1G095330.1 , HORVU1Hr1G012760.1 , HORVU1Hr1G020710.1 , HORVU4Hr1G026860.1 , HORVU5Hr1G095320.1 , HORVU5Hr1G095390.1 , HORVU6Hr1G092750.2 , HORVU3Hr1G057300.1
Wheat TraesCS7A02G548800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G111700 alpha/beta-Hydrolases superfamily protein(PubMedID : 26465154)@alpha/beta-Hydrolases superfamily protein(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
2 Sobic.009G249600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transcriptional regulator, putative, expressed K07735: putative transcriptional regulator
3 Sobic.004G343500 OsCttP2 - Putative C-terminal processing peptidase homologue, expressed -
4 Sobic.002G273300 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@B-box zinc finger family protein, putative, expressed -
5 Sobic.009G054900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@relA-SpoT like protein RSH4, putative, expressed -
6 Sobic.003G134400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.006G244000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sulfate transporter, putative, expressed K17471: sulfate transporter 3
8 Sobic.007G142200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed K13065: E2.3.1.133, shikimate O-hydroxycinnamoyltransferase
9 Sobic.010G251700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsHKT2@4 - Na+ transporter, expressed -
10 Sobic.001G329400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1230 domain containing protein, expressed -
11 Sobic.004G353700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.007G189700 - -
13 Sobic.001G406000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@STE_MEKK_ste11_MAP3K.13 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
14 Sobic.006G205100 zinc finger, C3HC4 type domain containing protein, expressed -
15 Sobic.008G108400 expressed protein -
16 Sobic.009G113800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Os5bglu20 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed K01188: beta-glucosidase
17 Sobic.001G446100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.005G202600 tropinone reductase 2, putative, expressed -
19 Sobic.009G222200 E3 ubiquitin ligase, putative, expressed K16276: K16276, zinc finger protein-like protein
20 Sobic.007G140800 Fatty acid desaturase 6 (omega-6 fatty acid desaturase) FAD6 (At)(PubMedID : 27208977)@omega-6 fatty acid desaturase, chloroplast precursor, putative, expressed K10255: FAD6, acyl-lipid omega-6 desaturase (Delta-12 desaturase)


Gene co-expression network
sample Sobic004G351700 Sobic004G351700 Sobic001G111700 Sobic001G111700 Sobic004G351700--Sobic001G111700 Sobic009G249600 Sobic009G249600 Sobic004G351700--Sobic009G249600 Sobic004G343500 Sobic004G343500 Sobic004G351700--Sobic004G343500 Sobic002G273300 Sobic002G273300 Sobic004G351700--Sobic002G273300 Sobic009G054900 Sobic009G054900 Sobic004G351700--Sobic009G054900 Sobic003G134400 Sobic003G134400 Sobic004G351700--Sobic003G134400 Sobic006G244000 Sobic006G244000 Sobic004G351700--Sobic006G244000 Sobic007G142200 Sobic007G142200 Sobic004G351700--Sobic007G142200 Sobic010G251700 Sobic010G251700 Sobic004G351700--Sobic010G251700 Sobic004G026300 Sobic004G026300 Sobic001G111700--Sobic004G026300 Sobic010G183100 Sobic010G183100 Sobic001G111700--Sobic010G183100 Sobic007G189700 Sobic007G189700 Sobic001G111700--Sobic007G189700 Sobic001G111700--Sobic004G351700 Sobic003G199800 Sobic003G199800 Sobic001G111700--Sobic003G199800 Sobic009G222200 Sobic009G222200 Sobic001G111700--Sobic009G222200 Sobic003G036100 Sobic003G036100 Sobic001G111700--Sobic003G036100 Sobic004G353700 Sobic004G353700 Sobic001G111700--Sobic004G353700 Sobic008G108400 Sobic008G108400 Sobic001G111700--Sobic008G108400 Sobic009G249600--Sobic002G273300 Sobic009G249600--Sobic004G351700 Sobic009G249600--Sobic006G244000 Sobic009G249600--Sobic004G343500 Sobic003G009700 Sobic003G009700 Sobic009G249600--Sobic003G009700 Sobic001G239500 Sobic001G239500 Sobic009G249600--Sobic001G239500 Sobic001G134100 Sobic001G134100 Sobic009G249600--Sobic001G134100 Sobic003G004200 Sobic003G004200 Sobic009G249600--Sobic003G004200 Sobic009G249600--Sobic009G054900 Sobic004G343500--Sobic002G273300 Sobic004G343500--Sobic009G054900 Sobic004G343500--Sobic001G239500 Sobic004G343500--Sobic009G249600 Sobic004G343500--Sobic001G134100 Sobic004G343500--Sobic004G351700 Sobic007G047400 Sobic007G047400 Sobic004G343500--Sobic007G047400 Sobic004G343500--Sobic006G244000 Sobic007G140800 Sobic007G140800 Sobic004G343500--Sobic007G140800 Sobic002G273300--Sobic004G343500 Sobic002G273300--Sobic007G047400 Sobic002G273300--Sobic009G249600 Sobic002G273300--Sobic001G239500 Sobic001G305600 Sobic001G305600 Sobic002G273300--Sobic001G305600 Sobic002G273300--Sobic003G004200 Sobic002G273300--Sobic004G351700 Sobic002G273300--Sobic009G054900 Sobic002G273300--Sobic003G009700 Sobic001G329400 Sobic001G329400 Sobic009G054900--Sobic001G329400 Sobic009G054900--Sobic010G251700 Sobic009G054900--Sobic004G343500 Sobic009G054900--Sobic007G140800 Sobic001G178250 Sobic001G178250 Sobic009G054900--Sobic001G178250 Sobic004G356400 Sobic004G356400 Sobic009G054900--Sobic004G356400 Sobic006G130300 Sobic006G130300 Sobic009G054900--Sobic006G130300 Sobic001G514800 Sobic001G514800 Sobic009G054900--Sobic001G514800 Sobic006G093800 Sobic006G093800 Sobic009G054900--Sobic006G093800 Sobic003G134400--Sobic004G351700 Sobic001G406000 Sobic001G406000 Sobic003G134400--Sobic001G406000 Sobic003G134400--Sobic004G353700 Sobic003G134400--Sobic004G343500 Sobic003G134400--Sobic007G189700 Sobic003G134400--Sobic001G111700 Sobic003G134400--Sobic006G244000 Sobic003G134400--Sobic002G273300 Sobic006G135575 Sobic006G135575 Sobic003G134400--Sobic006G135575 Sobic006G244000--Sobic001G329400 Sobic009G048900 Sobic009G048900 Sobic006G244000--Sobic009G048900 Sobic003G256700 Sobic003G256700 Sobic006G244000--Sobic003G256700 Sobic009G104800 Sobic009G104800 Sobic006G244000--Sobic009G104800 Sobic008G104601 Sobic008G104601 Sobic006G244000--Sobic008G104601 Sobic004G125700 Sobic004G125700 Sobic006G244000--Sobic004G125700 Sobic003G431900 Sobic003G431900 Sobic006G244000--Sobic003G431900 Sobic006G244000--Sobic001G406000 Sobic006G244000--Sobic001G134100 Sobic001G446100 Sobic001G446100 Sobic007G142200--Sobic001G446100 Sobic007G142200--Sobic001G329400 Sobic007G161500 Sobic007G161500 Sobic007G142200--Sobic007G161500 Sobic007G142200--Sobic006G244000 Sobic007G142200--Sobic010G251700 Sobic007G142200--Sobic001G134100 Sobic004G112100 Sobic004G112100 Sobic007G142200--Sobic004G112100 Sobic005G231500 Sobic005G231500 Sobic007G142200--Sobic005G231500 Sobic004G027600 Sobic004G027600 Sobic007G142200--Sobic004G027600 Sobic010G251700--Sobic004G027600 Sobic010G251700--Sobic005G231500 Sobic010G251700--Sobic004G112100 Sobic010G251700--Sobic004G356400 Sobic010G251700--Sobic001G446100 Sobic004G189800 Sobic004G189800 Sobic010G251700--Sobic004G189800 Sobic003G021100 Sobic003G021100 Sobic010G251700--Sobic003G021100 Sobic010G251700--Sobic001G329400 Sobic010G251700--Sobic007G142200
Octagon: transcription factors


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