Gene annotation
Transcriptome id Sobic.004G311500.1
Synonym Sb04g034390, SbSAUR39, small auxin up RNA
Functional annotation "domain confirmed by Pfam database, expression not supported" (PubMedID : 20499123)
OsSAUR12 - Auxin-responsive SAUR gene family member, expressed
UniProt C5XSX4
Pfam PF02519
Panther DB PTHR31374 PTHR31374:SF18
NCBI CDD -
KEGG Orthology K14488; SAUR family protein
Gene Ontology GO:0009733; response to auxin


Orthologs (automatic annotation)
TAIR AT2G46690 : SAUR-like auxin-responsive protein family
RAP-DB (Rice) LOC_Os02g52990.1 : OsSAUR12 - Auxin-responsive SAUR gene family member, expressed
MaizeGDB (Corn) Zm00025a033080 , Zm00025a022250
Brachypodium -
Barley HORVU6Hr1G080060.1 , HORVU6Hr1G080050.1 , HORVU6Hr1G080000.1
Wheat -
Populus -


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cDNA sequences
Sobic.004G311500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G179500 protein kinase APK1B, chloroplast precursor, putative, expressed -
2 Sobic.002G140300 plastocyanin-like domain containing protein, putative, expressed -
3 Sobic.006G089300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR2, putative, expressed -
4 Sobic.004G280900 zinc finger, C3HC4 type domain containing protein, expressed -
5 Sobic.006G228300 ethylene-responsive protein related, putative, expressed -
6 Sobic.001G040200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAC domain-containing protein 67, putative, expressed -
7 Sobic.004G286600 Protecting the plants under varied stress situations(PubMedID : 26536883)@dehydrin, putative, expressed -
8 Sobic.009G217600 STE_MEKK_ste11_MAP3K.19 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
9 Sobic.002G294700 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
10 Sobic.002G118600 SNARE domain containing protein, putative, expressed K18211: synaptosomal-associated protein 25
11 Sobic.001G538866 - -
12 Sobic.001G489600 expressed protein -
13 Sobic.002G245800 AN1-like zinc finger domain containing protein, expressed -
14 Sobic.001G341600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tyrosine protein kinase domain containing protein, putative, expressed -
15 Sobic.006G183400 OsRhmbd11 - Putative Rhomboid homologue, expressed -
16 Sobic.007G057100 expressed protein -
17 Sobic.001G095300 prenylated rab acceptor, putative, expressed -
18 Sobic.002G354900 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@gibberellin response modulator protein, putative, expressed -
19 Sobic.002G405600 early response to dehydration 15, putative, expressed -
20 Sobic.002G359300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@ZOS7-07 - C2H2 zinc finger protein, expressed -


Gene co-expression network
sample Sobic004G311500 Sobic004G311500 Sobic006G179500 Sobic006G179500 Sobic004G311500--Sobic006G179500 Sobic002G140300 Sobic002G140300 Sobic004G311500--Sobic002G140300 Sobic006G089300 Sobic006G089300 Sobic004G311500--Sobic006G089300 Sobic004G280900 Sobic004G280900 Sobic004G311500--Sobic004G280900 Sobic006G228300 Sobic006G228300 Sobic004G311500--Sobic006G228300 Sobic001G040200 Sobic001G040200 Sobic004G311500--Sobic001G040200 Sobic004G286600 Sobic004G286600 Sobic004G311500--Sobic004G286600 Sobic009G217600 Sobic009G217600 Sobic004G311500--Sobic009G217600 Sobic002G294700 Sobic002G294700 Sobic004G311500--Sobic002G294700 Sobic006G179500--Sobic002G140300 Sobic002G359300 Sobic002G359300 Sobic006G179500--Sobic002G359300 Sobic006G183400 Sobic006G183400 Sobic006G179500--Sobic006G183400 Sobic006G179500--Sobic001G040200 Sobic004G222500 Sobic004G222500 Sobic006G179500--Sobic004G222500 Sobic003G300800 Sobic003G300800 Sobic006G179500--Sobic003G300800 Sobic003G430400 Sobic003G430400 Sobic006G179500--Sobic003G430400 Sobic006G165100 Sobic006G165100 Sobic006G179500--Sobic006G165100 Sobic006G179500--Sobic006G089300 Sobic002G140300--Sobic006G179500 Sobic002G140300--Sobic001G040200 Sobic002G140300--Sobic006G165100 Sobic002G140300--Sobic004G222500 Sobic001G538866 Sobic001G538866 Sobic002G140300--Sobic001G538866 Sobic009G036100 Sobic009G036100 Sobic002G140300--Sobic009G036100 Sobic002G140300--Sobic006G183400 Sobic003G324400 Sobic003G324400 Sobic002G140300--Sobic003G324400 Sobic009G247900 Sobic009G247900 Sobic002G140300--Sobic009G247900 Sobic006G089300--Sobic001G040200 Sobic006G089300--Sobic002G359300 Sobic006G089300--Sobic006G179500 Sobic006G089300--Sobic006G228300 Sobic006G089300--Sobic001G538866 Sobic006G089300--Sobic002G140300 Sobic010G200700 Sobic010G200700 Sobic006G089300--Sobic010G200700 Sobic002G036100 Sobic002G036100 Sobic006G089300--Sobic002G036100 Sobic007G151100 Sobic007G151100 Sobic006G089300--Sobic007G151100 Sobic001G077400 Sobic001G077400 Sobic004G280900--Sobic001G077400 Sobic005G037000 Sobic005G037000 Sobic004G280900--Sobic005G037000 Sobic004G280900--Sobic009G217600 Sobic001G209800 Sobic001G209800 Sobic004G280900--Sobic001G209800 Sobic001G441100 Sobic001G441100 Sobic004G280900--Sobic001G441100 Sobic004G280900--Sobic002G036100 Sobic004G280900--Sobic002G140300 Sobic004G280900--Sobic001G538866 Sobic001G341600 Sobic001G341600 Sobic004G280900--Sobic001G341600 Sobic006G228300--Sobic006G089300 Sobic006G228300--Sobic010G200700 Sobic006G228300--Sobic006G179500 Sobic006G228300--Sobic001G040200 Sobic006G228300--Sobic001G538866 Sobic006G228300--Sobic002G140300 Sobic001G095300 Sobic001G095300 Sobic006G228300--Sobic001G095300 Sobic002G131800 Sobic002G131800 Sobic006G228300--Sobic002G131800 Sobic006G228300--Sobic001G341600 Sobic001G040200--Sobic002G140300 Sobic001G040200--Sobic002G359300 Sobic001G040200--Sobic003G324400 Sobic001G040200--Sobic003G430400 Sobic001G040200--Sobic001G538866 Sobic001G040200--Sobic009G036100 Sobic003G158500 Sobic003G158500 Sobic001G040200--Sobic003G158500 Sobic001G040200--Sobic006G179500 Sobic002G245800 Sobic002G245800 Sobic001G040200--Sobic002G245800 Sobic008G177800 Sobic008G177800 Sobic004G286600--Sobic008G177800 Sobic006G231100 Sobic006G231100 Sobic004G286600--Sobic006G231100 Sobic004G286600--Sobic002G294700 Sobic001G077700 Sobic001G077700 Sobic004G286600--Sobic001G077700 Sobic010G234600 Sobic010G234600 Sobic004G286600--Sobic010G234600 Sobic004G286600--Sobic002G036100 Sobic002G248100 Sobic002G248100 Sobic004G286600--Sobic002G248100 Sobic004G286600--Sobic006G179500 Sobic004G286600--Sobic002G140300 Sobic009G217600--Sobic001G441100 Sobic009G217600--Sobic001G341600 Sobic009G217600--Sobic001G077400 Sobic001G035000 Sobic001G035000 Sobic009G217600--Sobic001G035000 Sobic009G217600--Sobic004G280900 Sobic009G217600--Sobic001G209800 Sobic009G217600--Sobic005G037000 Sobic003G353800 Sobic003G353800 Sobic009G217600--Sobic003G353800 Sobic002G278500 Sobic002G278500 Sobic009G217600--Sobic002G278500 Sobic002G294700--Sobic008G177800 Sobic002G294700--Sobic010G234600 Sobic002G294700--Sobic006G231100 Sobic002G374100 Sobic002G374100 Sobic002G294700--Sobic002G374100 Sobic002G294700--Sobic004G286600 Sobic002G294700--Sobic001G077700 Sobic010G246000 Sobic010G246000 Sobic002G294700--Sobic010G246000 Sobic004G036600 Sobic004G036600 Sobic002G294700--Sobic004G036600 Sobic002G294700--Sobic002G278500
Octagon: transcription factors


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