Gene annotation
Transcriptome id Sobic.006G089300.1,Sobic.006G089300.3,Sobic.006G089300.2
Synonym Sb06g017470
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
peptide transporter PTR2, putative, expressed
UniProt C5Y8U7 , A0A1Z5RD46
Pfam PF00854
Panther DB PTHR11654 PTHR11654:SF114
NCBI CDD KOG1237; H+/oligopeptide symporter
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT1G33440 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os04g36040.1 : peptide transporter PTR2, putative, expressed
MaizeGDB (Corn) Zm00025a011277 , Zm00025a015551 , Zm00025a029894
Brachypodium KQJ88864 , KQJ88863 , KQJ82778 , KQK17878 , KQK17879 , PNT75721 , PNT75720
Barley HORVU2Hr1G076880.24 , HORVU2Hr1G076880.25 , HORVU2Hr1G076880.26 , HORVU2Hr1G076880.27 , HORVU2Hr1G076880.20 , HORVU2Hr1G076880.21 , HORVU2Hr1G076880.22 , HORVU2Hr1G076880.23 , HORVU2Hr1G076880.28 , HORVU2Hr1G076880.29 , HORVU4Hr1G015640.8 , HORVU4Hr1G015640.9 , HORVU4Hr1G015640.6 , HORVU4Hr1G015640.7 , HORVU4Hr1G015640.4 , HORVU4Hr1G015640.5 , HORVU4Hr1G015640.2 , HORVU4Hr1G015640.3 , HORVU4Hr1G015640.1 , HORVU2Hr1G076880.9 , HORVU2Hr1G076880.8 , HORVU2Hr1G076880.5 , HORVU2Hr1G076880.4 , HORVU2Hr1G076880.3 , HORVU2Hr1G076880.19 , HORVU2Hr1G076880.18 , HORVU2Hr1G076880.11 , HORVU2Hr1G076880.10 , HORVU2Hr1G076880.13 , HORVU2Hr1G076880.12 , HORVU2Hr1G076880.15 , HORVU2Hr1G076880.14 , HORVU2Hr1G076880.17 , HORVU2Hr1G076880.16 , HORVU2Hr1G081050.1 , HORVU4Hr1G015640.10 , HORVU4Hr1G015640.11 , HORVU4Hr1G015640.12 , HORVU2Hr1G076880.32 , HORVU2Hr1G076880.31 , HORVU2Hr1G076880.30 , HORVU2Hr1G076880.7 , HORVU2Hr1G076880.6 , HORVU2Hr1G076880.1 , HORVU2Hr1G076880.2
Wheat TraesCS4D02G087900 , TraesCS7D02G049300 , TraesCS4B02G090800 , TraesCS4A02G225400 , TraesCS2D02G327000 , TraesCS2A02G309100 , TraesCS2A02G309100 , TraesCS2B02G326200 , TraesCS4A02G440400 , TraesCS7A02G054000 , TraesCS7A02G054000 , TraesCS4A02G440500 , TraesCS2D02G307400 , TraesCS4A02G440600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G040200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAC domain-containing protein 67, putative, expressed -
2 Sobic.002G359300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@ZOS7-07 - C2H2 zinc finger protein, expressed -
3 Sobic.006G179500 protein kinase APK1B, chloroplast precursor, putative, expressed -
4 Sobic.006G228300 ethylene-responsive protein related, putative, expressed -
5 Sobic.001G538866 - -
6 Sobic.002G140300 plastocyanin-like domain containing protein, putative, expressed -
7 Sobic.010G200700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.002G036100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed -
9 Sobic.007G151100 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
10 Sobic.001G513700 down-regulated TF in developmental senescence(PubMedID : 27586543)@BHLH transcription factor, putative, expressed -
11 Sobic.003G324400 Not investigated(PubMedID : 23766026)@Contribute to rice salt tolerance under a salt inducible abscisic acid 2 (ABA2) promoter(PubMedID : 28393269)@AP2 domain containing protein, expressed -
12 Sobic.003G158500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@abscisic stress-ripening, putative, expressed -
13 Sobic.004G286600 Protecting the plants under varied stress situations(PubMedID : 26536883)@dehydrin, putative, expressed -
14 Sobic.005G010200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.006G183400 OsRhmbd11 - Putative Rhomboid homologue, expressed -
16 Sobic.002G294700 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
17 Sobic.002G202600 joka8, putative, expressed -
18 Sobic.008G177800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
19 Sobic.001G516600 AMP-binding domain containing protein, expressed K10526: OPC-8:0 CoA ligase 1
20 Sobic.002G245100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@pirin, putative, expressed K06911: quercetin 2,3-dioxygenase


Gene co-expression network
sample Sobic006G089300 Sobic006G089300 Sobic001G040200 Sobic001G040200 Sobic006G089300--Sobic001G040200 Sobic002G359300 Sobic002G359300 Sobic006G089300--Sobic002G359300 Sobic006G179500 Sobic006G179500 Sobic006G089300--Sobic006G179500 Sobic006G228300 Sobic006G228300 Sobic006G089300--Sobic006G228300 Sobic001G538866 Sobic001G538866 Sobic006G089300--Sobic001G538866 Sobic002G140300 Sobic002G140300 Sobic006G089300--Sobic002G140300 Sobic010G200700 Sobic010G200700 Sobic006G089300--Sobic010G200700 Sobic002G036100 Sobic002G036100 Sobic006G089300--Sobic002G036100 Sobic007G151100 Sobic007G151100 Sobic006G089300--Sobic007G151100 Sobic001G040200--Sobic002G140300 Sobic001G040200--Sobic002G359300 Sobic003G324400 Sobic003G324400 Sobic001G040200--Sobic003G324400 Sobic003G430400 Sobic003G430400 Sobic001G040200--Sobic003G430400 Sobic001G040200--Sobic001G538866 Sobic009G036100 Sobic009G036100 Sobic001G040200--Sobic009G036100 Sobic003G158500 Sobic003G158500 Sobic001G040200--Sobic003G158500 Sobic001G040200--Sobic006G179500 Sobic002G245800 Sobic002G245800 Sobic001G040200--Sobic002G245800 Sobic002G359300--Sobic001G040200 Sobic002G359300--Sobic006G179500 Sobic002G359300--Sobic002G140300 Sobic006G183400 Sobic006G183400 Sobic002G359300--Sobic006G183400 Sobic002G195900 Sobic002G195900 Sobic002G359300--Sobic002G195900 Sobic002G359300--Sobic003G430400 Sobic003G264500 Sobic003G264500 Sobic002G359300--Sobic003G264500 Sobic002G359300--Sobic006G089300 Sobic009G183300 Sobic009G183300 Sobic002G359300--Sobic009G183300 Sobic006G179500--Sobic002G140300 Sobic006G179500--Sobic002G359300 Sobic006G179500--Sobic006G183400 Sobic006G179500--Sobic001G040200 Sobic004G222500 Sobic004G222500 Sobic006G179500--Sobic004G222500 Sobic003G300800 Sobic003G300800 Sobic006G179500--Sobic003G300800 Sobic006G179500--Sobic003G430400 Sobic006G165100 Sobic006G165100 Sobic006G179500--Sobic006G165100 Sobic006G179500--Sobic006G089300 Sobic006G228300--Sobic006G089300 Sobic006G228300--Sobic010G200700 Sobic006G228300--Sobic006G179500 Sobic006G228300--Sobic001G040200 Sobic006G228300--Sobic001G538866 Sobic006G228300--Sobic002G140300 Sobic001G095300 Sobic001G095300 Sobic006G228300--Sobic001G095300 Sobic002G131800 Sobic002G131800 Sobic006G228300--Sobic002G131800 Sobic001G341600 Sobic001G341600 Sobic006G228300--Sobic001G341600 Sobic001G538866--Sobic002G140300 Sobic001G538866--Sobic001G040200 Sobic004G280900 Sobic004G280900 Sobic001G538866--Sobic004G280900 Sobic001G538866--Sobic002G036100 Sobic001G538866--Sobic003G324400 Sobic001G538866--Sobic006G165100 Sobic001G077400 Sobic001G077400 Sobic001G538866--Sobic001G077400 Sobic001G538866--Sobic007G151100 Sobic009G200700 Sobic009G200700 Sobic001G538866--Sobic009G200700 Sobic002G140300--Sobic006G179500 Sobic002G140300--Sobic001G040200 Sobic002G140300--Sobic006G165100 Sobic002G140300--Sobic004G222500 Sobic002G140300--Sobic001G538866 Sobic002G140300--Sobic009G036100 Sobic002G140300--Sobic006G183400 Sobic002G140300--Sobic003G324400 Sobic009G247900 Sobic009G247900 Sobic002G140300--Sobic009G247900 Sobic004G297200 Sobic004G297200 Sobic010G200700--Sobic004G297200 Sobic010G200700--Sobic006G089300 Sobic003G012800 Sobic003G012800 Sobic010G200700--Sobic003G012800 Sobic010G200700--Sobic006G228300 Sobic003G373000 Sobic003G373000 Sobic010G200700--Sobic003G373000 Sobic009G066800 Sobic009G066800 Sobic010G200700--Sobic009G066800 Sobic010G200700--Sobic002G036100 Sobic010G245800 Sobic010G245800 Sobic010G200700--Sobic010G245800 Sobic010G200700--Sobic002G131800 Sobic002G036100--Sobic001G077400 Sobic002G036100--Sobic004G280900 Sobic002G036100--Sobic001G538866 Sobic002G036100--Sobic006G165100 Sobic002G036100--Sobic002G140300 Sobic001G259600 Sobic001G259600 Sobic002G036100--Sobic001G259600 Sobic003G313800 Sobic003G313800 Sobic002G036100--Sobic003G313800 Sobic002G036150 Sobic002G036150 Sobic002G036100--Sobic002G036150 Sobic002G036100--Sobic001G040200 Sobic001G516600 Sobic001G516600 Sobic007G151100--Sobic001G516600 Sobic007G151100--Sobic003G158500 Sobic002G356101 Sobic002G356101 Sobic007G151100--Sobic002G356101 Sobic007G151100--Sobic001G538866 Sobic005G028700 Sobic005G028700 Sobic007G151100--Sobic005G028700 Sobic007G151100--Sobic002G140300 Sobic002G245100 Sobic002G245100 Sobic007G151100--Sobic002G245100 Sobic001G513700 Sobic001G513700 Sobic007G151100--Sobic001G513700 Sobic007G151100--Sobic002G036100
Octagon: transcription factors


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