Gene annotation
Transcriptome id Sobic.004G295700.1
Synonym ethylene response factor 53, Sb04g032960, SbERF53
Functional annotation Not investigated (PubMedID : 23766026)
AP2 domain containing protein, expressed
UniProt C5XRY6
Pfam PF00847
Panther DB PTHR31985 PTHR31985:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT2G44940 : Integrase-type DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os02g43940.1 : AP2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a020096 , Zm00025a020098 , Zm00025a010156 , Zm00025a032201 , Zm00025a020883 , Zm00025a020882 , Zm00025a020881 , Zm00025a056875 , Zm00025a051964
Brachypodium KQK00605 , KQK00604 , KQJ83932
Barley HORVU1Hr1G056090.1 , HORVU0Hr1G016370.1 , HORVU0Hr1G018290.1 , HORVU3Hr1G026950.1 , HORVU0Hr1G030500.1 , HORVU0Hr1G018240.1 , HORVU6Hr1G062940.1 , HORVU2Hr1G097850.6 , HORVU2Hr1G097850.5 , HORVU2Hr1G097850.4 , HORVU2Hr1G097850.3 , HORVU2Hr1G097850.1 , HORVU7Hr1G088790.1 , HORVU3Hr1G086870.2 , HORVU3Hr1G086870.1 , HORVU5Hr1G094730.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G050600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CSLF6 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
2 Sobic.001G460000 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
3 Sobic.007G180900 BAG domain-containing protein, putative, expressed -
4 Sobic.009G136700 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
5 Sobic.002G118700 -(PubMedID : 28944535)@CESA3 - cellulose synthase, expressed K10999: cellulose synthase A
6 Sobic.003G362300 expressed protein -
7 Sobic.004G296200 inactive receptor kinase At2g26730 precursor, putative, expressed -
8 Sobic.002G110100 cytochrome P450 71E1, putative, expressed -
9 Sobic.007G130800 aldehyde dehydrogenase, putative, expressed K00130: betB, betaine-aldehyde dehydrogenase
10 Sobic.001G275600 peptide transporter PTR2, putative, expressed -
11 Sobic.006G175500 anthocyanin regulatory Lc protein, putative, expressed -
12 Sobic.007G190200 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
13 Sobic.003G131800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@major facilitator superfamily antiporter, putative, expressed -
14 Sobic.001G249500 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
15 Sobic.004G257700 aspartic proteinase nepenthesin-1 precursor, putative, expressed -
16 Sobic.009G151000 Subtilase family protein("PubMedID : 26759170,PubMedID : 24597475")@OsSub47 - Putative Subtilisin homologue, expressed -
17 Sobic.009G070700 Acid phosphatase class B family protein(PubMedID : 26320239)@HAD superfamily phosphatase, putative, expressed -
18 Sobic.006G227000 leucoanthocyanidin reductase, putative, expressed K08695: anthocyanidin reductase
19 Sobic.007G069500 expressed protein -
20 Sobic.005G029400 strictosidine synthase, putative, expressed -


Gene co-expression network
sample Sobic004G295700 Sobic004G295700 Sobic007G050600 Sobic007G050600 Sobic004G295700--Sobic007G050600 Sobic001G460000 Sobic001G460000 Sobic004G295700--Sobic001G460000 Sobic007G180900 Sobic007G180900 Sobic004G295700--Sobic007G180900 Sobic009G136700 Sobic009G136700 Sobic004G295700--Sobic009G136700 Sobic002G118700 Sobic002G118700 Sobic004G295700--Sobic002G118700 Sobic003G362300 Sobic003G362300 Sobic004G295700--Sobic003G362300 Sobic004G296200 Sobic004G296200 Sobic004G295700--Sobic004G296200 Sobic002G110100 Sobic002G110100 Sobic004G295700--Sobic002G110100 Sobic007G130800 Sobic007G130800 Sobic004G295700--Sobic007G130800 Sobic007G050600--Sobic001G460000 Sobic001G334900 Sobic001G334900 Sobic007G050600--Sobic001G334900 Sobic007G050600--Sobic004G295700 Sobic009G063400 Sobic009G063400 Sobic007G050600--Sobic009G063400 Sobic007G050600--Sobic004G296200 Sobic009G232200 Sobic009G232200 Sobic007G050600--Sobic009G232200 Sobic001G012600 Sobic001G012600 Sobic007G050600--Sobic001G012600 Sobic004G257700 Sobic004G257700 Sobic007G050600--Sobic004G257700 Sobic010G228100 Sobic010G228100 Sobic007G050600--Sobic010G228100 Sobic001G460000--Sobic007G050600 Sobic001G460000--Sobic002G118700 Sobic001G460000--Sobic009G063400 Sobic001G460000--Sobic004G295700 Sobic002G075500 Sobic002G075500 Sobic001G460000--Sobic002G075500 Sobic001G460000--Sobic001G334900 Sobic002G321400 Sobic002G321400 Sobic001G460000--Sobic002G321400 Sobic001G460000--Sobic004G296200 Sobic004G265600 Sobic004G265600 Sobic001G460000--Sobic004G265600 Sobic003G144600 Sobic003G144600 Sobic007G180900--Sobic003G144600 Sobic007G180900--Sobic002G075500 Sobic002G187400 Sobic002G187400 Sobic007G180900--Sobic002G187400 Sobic007G180900--Sobic002G118700 Sobic004G261200 Sobic004G261200 Sobic007G180900--Sobic004G261200 Sobic004G257800 Sobic004G257800 Sobic007G180900--Sobic004G257800 Sobic003G198400 Sobic003G198400 Sobic007G180900--Sobic003G198400 Sobic009G099000 Sobic009G099000 Sobic007G180900--Sobic009G099000 Sobic003G353400 Sobic003G353400 Sobic007G180900--Sobic003G353400 Sobic003G131800 Sobic003G131800 Sobic009G136700--Sobic003G131800 Sobic002G075800 Sobic002G075800 Sobic009G136700--Sobic002G075800 Sobic009G136500 Sobic009G136500 Sobic009G136700--Sobic009G136500 Sobic002G278800 Sobic002G278800 Sobic009G136700--Sobic002G278800 Sobic002G278700 Sobic002G278700 Sobic009G136700--Sobic002G278700 Sobic003G173700 Sobic003G173700 Sobic009G136700--Sobic003G173700 Sobic007G195300 Sobic007G195300 Sobic009G136700--Sobic007G195300 Sobic010G012400 Sobic010G012400 Sobic009G136700--Sobic010G012400 Sobic001G332966 Sobic001G332966 Sobic009G136700--Sobic001G332966 Sobic002G118700--Sobic009G063400 Sobic009G125900 Sobic009G125900 Sobic002G118700--Sobic009G125900 Sobic002G118700--Sobic002G075500 Sobic001G099100 Sobic001G099100 Sobic002G118700--Sobic001G099100 Sobic004G051300 Sobic004G051300 Sobic002G118700--Sobic004G051300 Sobic009G026101 Sobic009G026101 Sobic002G118700--Sobic009G026101 Sobic010G090500 Sobic010G090500 Sobic002G118700--Sobic010G090500 Sobic002G118700--Sobic007G180900 Sobic002G276600 Sobic002G276600 Sobic002G118700--Sobic002G276600 Sobic003G362300--Sobic004G296200 Sobic004G234300 Sobic004G234300 Sobic003G362300--Sobic004G234300 Sobic003G362300--Sobic003G144600 Sobic003G143900 Sobic003G143900 Sobic003G362300--Sobic003G143900 Sobic003G362300--Sobic004G295700 Sobic005G060766 Sobic005G060766 Sobic003G362300--Sobic005G060766 Sobic003G362300--Sobic004G261200 Sobic004G203500 Sobic004G203500 Sobic003G362300--Sobic004G203500 Sobic003G362300--Sobic007G180900 Sobic004G296200--Sobic003G362300 Sobic008G024300 Sobic008G024300 Sobic004G296200--Sobic008G024300 Sobic003G410700 Sobic003G410700 Sobic004G296200--Sobic003G410700 Sobic004G296200--Sobic007G050600 Sobic004G296200--Sobic001G460000 Sobic004G262600 Sobic004G262600 Sobic004G296200--Sobic004G262600 Sobic004G296200--Sobic007G180900 Sobic004G296200--Sobic004G261200 Sobic001G021500 Sobic001G021500 Sobic004G296200--Sobic001G021500 Sobic002G226700 Sobic002G226700 Sobic002G110100--Sobic002G226700 Sobic010G166700 Sobic010G166700 Sobic002G110100--Sobic010G166700 Sobic002G173800 Sobic002G173800 Sobic002G110100--Sobic002G173800 Sobic002G110100--Sobic009G136700 Sobic002G110100--Sobic004G296200 Sobic005G141000 Sobic005G141000 Sobic002G110100--Sobic005G141000 Sobic002G110100--Sobic004G295700 Sobic002G110100--Sobic002G075800 Sobic002G110100--Sobic007G050600 Sobic005G224500 Sobic005G224500 Sobic007G130800--Sobic005G224500 Sobic007G190200 Sobic007G190200 Sobic007G130800--Sobic007G190200 Sobic006G074300 Sobic006G074300 Sobic007G130800--Sobic006G074300 Sobic002G301200 Sobic002G301200 Sobic007G130800--Sobic002G301200 Sobic001G147300 Sobic001G147300 Sobic007G130800--Sobic001G147300 Sobic008G178800 Sobic008G178800 Sobic007G130800--Sobic008G178800 Sobic010G258500 Sobic010G258500 Sobic007G130800--Sobic010G258500 Sobic001G012200 Sobic001G012200 Sobic007G130800--Sobic001G012200 Sobic007G130800--Sobic004G257700
Octagon: transcription factors


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