Gene annotation
Transcriptome id Sobic.004G234900.1
Synonym Sb04g027780, MUB6
Functional annotation membrane-anchored ubiquitin-fold protein, putative, expressed
UniProt C5XYQ0
Pfam PF13881
Panther DB PTHR13169
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G22050 : membrane-anchored ubiquitin-fold protein 6 precursor
RAP-DB (Rice) LOC_Os02g51500.2 : membrane-anchored ubiquitin-fold protein, putative, expressed
MaizeGDB (Corn) Zm00025a033182 , Zm00025a022111
Brachypodium KQK01890 , KQK01889 , KQK18906
Barley HORVU6Hr1G075180.1 , HORVU6Hr1G075180.2 , HORVU7Hr1G037480.3 , HORVU7Hr1G037480.2 , HORVU7Hr1G037480.1 , HORVU7Hr1G037480.4
Wheat TraesCS7A02G182400 , TraesCS6D02G282600 , TraesCS6D02G282600 , TraesCS7D02G183800 , TraesCS7D02G183800 , TraesCS6B02G332300 , TraesCS6B02G332300 , TraesCS6A02G303000 , TraesCS6A02G303000
Populus -


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cDNA sequences
Sobic.004G234900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G098200 magnesium-dependent phosphatase 1, putative, expressed K17619: magnesium-dependent phosphatase 1
2 Sobic.006G225600 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
3 Sobic.002G122700 expressed protein -
4 Sobic.001G162100 WRKY94, expressed -
5 Sobic.002G251700 no apical meristem protein, putative, expressed -
6 Sobic.010G174500 protein kinase family protein, putative, expressed -
7 Sobic.006G254800 expressed protein K13153: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
8 Sobic.001G180900 secretory carrier-associated membrane protein 4, putative, expressed -
9 Sobic.010G000900 spotted leaf 11, putative, expressed -
10 Sobic.001G503300 tyrosine protein kinase domain containing protein, putative, expressed -
11 Sobic.003G077900 vacuolar protein sorting-associating protein 4B, putative, expressed K12196: vacuolar protein-sorting-associated protein 4
12 Sobic.001G220400 SNF7 domain containing protein, putative, expressed K12192: charged multivesicular body protein 2B
13 Sobic.010G101500 skp1 family, tetramerisation domain containing protein, expressed K03872: ELOC, elongin-C
14 Sobic.002G400000 MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
15 Sobic.003G295400 MAC/Perforin domain containing protein, putative, expressed -
16 Sobic.009G219900 peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed K01056: PTH1, pth, peptidyl-tRNA hydrolase, PTH1 family
17 Sobic.001G051200 vesicle-associated membrane protein, putative, expressed K08511: vesicle-associated membrane protein 72
K08515: vesicle-associated membrane protein 7
18 Sobic.001G057800 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
19 Sobic.001G434900 serine palmitoyltransferase 1, putative, expressed K00654: serine palmitoyltransferase
20 Sobic.004G130900 seven in absentia protein family domain containing protein, expressed K04506: E3 ubiquitin-protein ligase SIAH1


Gene co-expression network
sample Sobic004G234900 Sobic004G234900 Sobic001G098200 Sobic001G098200 Sobic004G234900--Sobic001G098200 Sobic006G225600 Sobic006G225600 Sobic004G234900--Sobic006G225600 Sobic002G122700 Sobic002G122700 Sobic004G234900--Sobic002G122700 Sobic001G162100 Sobic001G162100 Sobic004G234900--Sobic001G162100 Sobic002G251700 Sobic002G251700 Sobic004G234900--Sobic002G251700 Sobic010G174500 Sobic010G174500 Sobic004G234900--Sobic010G174500 Sobic006G254800 Sobic006G254800 Sobic004G234900--Sobic006G254800 Sobic001G180900 Sobic001G180900 Sobic004G234900--Sobic001G180900 Sobic010G000900 Sobic010G000900 Sobic004G234900--Sobic010G000900 Sobic001G098200--Sobic004G234900 Sobic001G098200--Sobic006G225600 Sobic004G253000 Sobic004G253000 Sobic001G098200--Sobic004G253000 Sobic001G098200--Sobic002G251700 Sobic010G090900 Sobic010G090900 Sobic001G098200--Sobic010G090900 Sobic003G050600 Sobic003G050600 Sobic001G098200--Sobic003G050600 Sobic004G301900 Sobic004G301900 Sobic001G098200--Sobic004G301900 Sobic001G051200 Sobic001G051200 Sobic001G098200--Sobic001G051200 Sobic003G044200 Sobic003G044200 Sobic001G098200--Sobic003G044200 Sobic006G225600--Sobic004G234900 Sobic006G225600--Sobic002G251700 Sobic006G225600--Sobic001G162100 Sobic006G225600--Sobic001G098200 Sobic003G295400 Sobic003G295400 Sobic006G225600--Sobic003G295400 Sobic006G225600--Sobic002G122700 Sobic004G274400 Sobic004G274400 Sobic006G225600--Sobic004G274400 Sobic006G225600--Sobic001G051200 Sobic001G434900 Sobic001G434900 Sobic006G225600--Sobic001G434900 Sobic002G122700--Sobic004G234900 Sobic002G122700--Sobic006G225600 Sobic002G122700--Sobic001G434900 Sobic010G101500 Sobic010G101500 Sobic002G122700--Sobic010G101500 Sobic001G220400 Sobic001G220400 Sobic002G122700--Sobic001G220400 Sobic001G329100 Sobic001G329100 Sobic002G122700--Sobic001G329100 Sobic002G122700--Sobic010G000900 Sobic010G188100 Sobic010G188100 Sobic002G122700--Sobic010G188100 Sobic003G248600 Sobic003G248600 Sobic002G122700--Sobic003G248600 Sobic001G162100--Sobic006G225600 Sobic001G162100--Sobic004G234900 Sobic009G059700 Sobic009G059700 Sobic001G162100--Sobic009G059700 Sobic008G016900 Sobic008G016900 Sobic001G162100--Sobic008G016900 Sobic010G062800 Sobic010G062800 Sobic001G162100--Sobic010G062800 Sobic001G162100--Sobic002G122700 Sobic001G162100--Sobic001G434900 Sobic001G162100--Sobic001G098200 Sobic009G219900 Sobic009G219900 Sobic001G162100--Sobic009G219900 Sobic002G251700--Sobic006G225600 Sobic002G251700--Sobic003G295400 Sobic002G251700--Sobic004G234900 Sobic002G251700--Sobic001G098200 Sobic010G009400 Sobic010G009400 Sobic002G251700--Sobic010G009400 Sobic003G077900 Sobic003G077900 Sobic002G251700--Sobic003G077900 Sobic003G217400 Sobic003G217400 Sobic002G251700--Sobic003G217400 Sobic007G007000 Sobic007G007000 Sobic002G251700--Sobic007G007000 Sobic002G251700--Sobic010G000900 Sobic010G174500--Sobic004G234900 Sobic003G413500 Sobic003G413500 Sobic010G174500--Sobic003G413500 Sobic001G503300 Sobic001G503300 Sobic010G174500--Sobic001G503300 Sobic006G092400 Sobic006G092400 Sobic010G174500--Sobic006G092400 Sobic010G174500--Sobic006G225600 Sobic002G130800 Sobic002G130800 Sobic010G174500--Sobic002G130800 Sobic005G105000 Sobic005G105000 Sobic010G174500--Sobic005G105000 Sobic010G174500--Sobic001G180900 Sobic009G138100 Sobic009G138100 Sobic010G174500--Sobic009G138100 Sobic006G254800--Sobic004G234900 Sobic006G254800--Sobic001G329100 Sobic006G254800--Sobic001G098200 Sobic006G254800--Sobic002G122700 Sobic003G344900 Sobic003G344900 Sobic006G254800--Sobic003G344900 Sobic006G254800--Sobic006G225600 Sobic006G254800--Sobic010G000900 Sobic010G058500 Sobic010G058500 Sobic006G254800--Sobic010G058500 Sobic005G195200 Sobic005G195200 Sobic006G254800--Sobic005G195200 Sobic006G034000 Sobic006G034000 Sobic001G180900--Sobic006G034000 Sobic001G180900--Sobic004G234900 Sobic002G378800 Sobic002G378800 Sobic001G180900--Sobic002G378800 Sobic009G079300 Sobic009G079300 Sobic001G180900--Sobic009G079300 Sobic009G126900 Sobic009G126900 Sobic001G180900--Sobic009G126900 Sobic001G180900--Sobic004G274400 Sobic001G180900--Sobic006G225600 Sobic008G110600 Sobic008G110600 Sobic001G180900--Sobic008G110600 Sobic003G126300 Sobic003G126300 Sobic001G180900--Sobic003G126300 Sobic002G400000 Sobic002G400000 Sobic010G000900--Sobic002G400000 Sobic003G012200 Sobic003G012200 Sobic010G000900--Sobic003G012200 Sobic001G047400 Sobic001G047400 Sobic010G000900--Sobic001G047400 Sobic003G261400 Sobic003G261400 Sobic010G000900--Sobic003G261400 Sobic004G130900 Sobic004G130900 Sobic010G000900--Sobic004G130900 Sobic010G000900--Sobic001G051200 Sobic001G323000 Sobic001G323000 Sobic010G000900--Sobic001G323000 Sobic001G388200 Sobic001G388200 Sobic010G000900--Sobic001G388200 Sobic001G085100 Sobic001G085100 Sobic010G000900--Sobic001G085100
Octagon: transcription factors


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