Gene annotation
Transcriptome id Sobic.004G111100.1
Synonym Sb04g009090
Functional annotation GDSL-like lipase/acylhydrolase, putative, expressed
UniProt C5XZ43
Pfam PF00657
Panther DB PTHR22835 PTHR22835:SF213
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016788; hydrolase activity, acting on ester bonds


Orthologs (automatic annotation)
TAIR AT5G45910 : GDSL-like Lipase/Acylhydrolase superfamily protein
RAP-DB (Rice) LOC_Os02g15230.1 : GDSL-like lipase/acylhydrolase, putative, expressed
MaizeGDB (Corn) Zm00025a042355 , Zm00025a019948 , Zm00025a034450
Brachypodium KQJ94250
Barley HORVU5Hr1G022920.8 , HORVU5Hr1G022920.9 , HORVU6Hr1G042550.1 , HORVU6Hr1G042550.2 , HORVU6Hr1G042550.3 , HORVU7Hr1G031620.1 , HORVU3Hr1G028060.3 , HORVU3Hr1G028060.2 , HORVU2Hr1G112400.1 , HORVU2Hr1G112400.2 , HORVU2Hr1G112400.3 , HORVU2Hr1G112400.4 , HORVU2Hr1G112400.5 , HORVU2Hr1G112400.6 , HORVU2Hr1G112400.7 , HORVU4Hr1G034710.1 , HORVU4Hr1G034710.3 , HORVU4Hr1G034710.2 , HORVU7Hr1G079720.1 , HORVU7Hr1G079720.2 , HORVU7Hr1G079720.3 , HORVU7Hr1G079720.4 , HORVU7Hr1G079720.5 , HORVU0Hr1G006800.1 , HORVU0Hr1G006800.2
Wheat TraesCS3B02G290800 , TraesCS3B02G290800 , TraesCS7B02G233800 , TraesCS7A02G348900 , TraesCS6B02G220200 , TraesCS6B02G220200 , TraesCS3D02G258000 , TraesCS3D02G258000 , TraesCS3D02G258000 , TraesCS3D02G258000 , TraesCS6D02G183800 , TraesCS3D02G146200 , TraesCS3A02G140900 , TraesCS3A02G258100 , TraesCS3A02G258100 , TraesCS3A02G258100 , TraesCS7D02G329700
Populus -


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cDNA sequences
Sobic.004G111100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G101900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@endoglucanase, putative, expressed -
2 Sobic.007G047300 encodes the lignin biosynthetic enzyme caffeic acid O-methyltransferase (COMT)(PubMedID : 20585750)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methylate the tricin precursors luteolin and selgin(PubMedID : 28594846)@monolignol biosynthetic enzyme caffeic acid O-methyl transferase (COMT)(PubMedID : 12756532)@lignin biosynthesis(PubMedID : 12756532)@key enzymes in the phenylptropanoid pathway(PubMedID : 28119720)@O-methyltransferase, putative, expressed K05279: flavonol 3-O-methyltransferase
3 Sobic.003G254700 glycosyltransferase family 43 protein, putative, expressed -
4 Sobic.009G162300 similar to Putative laccase-11(PubMedID : 29862293)@Laccase LAC17 (At)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
5 Sobic.003G227700 cytochrome P450 72A1, putative, expressed -
6 Sobic.001G360700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K13083: flavonoid 3',5'-hydroxylase
7 Sobic.002G207200 - -
8 Sobic.001G072600 expressed protein -
9 Sobic.009G034300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
10 Sobic.001G133900 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
11 Sobic.009G236100 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
12 Sobic.004G007600 glycosyltransferase protein, putative, expressed -
13 Sobic.001G360800 cytochrome P450, putative, expressed K13083: flavonoid 3',5'-hydroxylase
14 Sobic.009G220100 exostosin family domain containing protein, expressed -
15 Sobic.002G218900 plant viral response family protein, putative, expressed -
16 Sobic.001G409100 glycosyltransferase family 43 protein, putative, expressed -
17 Sobic.004G319600 polygalacturonase, putative, expressed -
18 Sobic.004G047600 plant-specific domain TIGR01627 family protein, expressed -
19 Sobic.009G215000 - -
20 Sobic.003G410800 exostosin family domain containing protein, expressed -


Gene co-expression network
sample Sobic004G111100 Sobic004G111100 Sobic010G101900 Sobic010G101900 Sobic004G111100--Sobic010G101900 Sobic007G047300 Sobic007G047300 Sobic004G111100--Sobic007G047300 Sobic003G254700 Sobic003G254700 Sobic004G111100--Sobic003G254700 Sobic009G162300 Sobic009G162300 Sobic004G111100--Sobic009G162300 Sobic003G227700 Sobic003G227700 Sobic004G111100--Sobic003G227700 Sobic001G360700 Sobic001G360700 Sobic004G111100--Sobic001G360700 Sobic002G207200 Sobic002G207200 Sobic004G111100--Sobic002G207200 Sobic001G072600 Sobic001G072600 Sobic004G111100--Sobic001G072600 Sobic009G034300 Sobic009G034300 Sobic004G111100--Sobic009G034300 Sobic010G101900--Sobic004G111100 Sobic010G101900--Sobic007G047300 Sobic006G282300 Sobic006G282300 Sobic010G101900--Sobic006G282300 Sobic003G151600 Sobic003G151600 Sobic010G101900--Sobic003G151600 Sobic002G252000 Sobic002G252000 Sobic010G101900--Sobic002G252000 Sobic004G071000 Sobic004G071000 Sobic010G101900--Sobic004G071000 Sobic010G069900 Sobic010G069900 Sobic010G101900--Sobic010G069900 Sobic010G101900--Sobic003G227700 Sobic009G215000 Sobic009G215000 Sobic010G101900--Sobic009G215000 Sobic007G047300--Sobic001G360700 Sobic004G047600 Sobic004G047600 Sobic007G047300--Sobic004G047600 Sobic007G047300--Sobic009G162300 Sobic003G352700 Sobic003G352700 Sobic007G047300--Sobic003G352700 Sobic001G471800 Sobic001G471800 Sobic007G047300--Sobic001G471800 Sobic007G047300--Sobic004G111100 Sobic002G146000 Sobic002G146000 Sobic007G047300--Sobic002G146000 Sobic007G047300--Sobic002G207200 Sobic002G203900 Sobic002G203900 Sobic007G047300--Sobic002G203900 Sobic003G254700--Sobic004G111100 Sobic004G007600 Sobic004G007600 Sobic003G254700--Sobic004G007600 Sobic001G133900 Sobic001G133900 Sobic003G254700--Sobic001G133900 Sobic009G026101 Sobic009G026101 Sobic003G254700--Sobic009G026101 Sobic003G254700--Sobic001G072600 Sobic009G246700 Sobic009G246700 Sobic003G254700--Sobic009G246700 Sobic009G125900 Sobic009G125900 Sobic003G254700--Sobic009G125900 Sobic002G075500 Sobic002G075500 Sobic003G254700--Sobic002G075500 Sobic002G218900 Sobic002G218900 Sobic003G254700--Sobic002G218900 Sobic003G353200 Sobic003G353200 Sobic009G162300--Sobic003G353200 Sobic009G162300--Sobic002G146000 Sobic003G053600 Sobic003G053600 Sobic009G162300--Sobic003G053600 Sobic003G183300 Sobic003G183300 Sobic009G162300--Sobic003G183300 Sobic005G166700 Sobic005G166700 Sobic009G162300--Sobic005G166700 Sobic003G280000 Sobic003G280000 Sobic009G162300--Sobic003G280000 Sobic006G003100 Sobic006G003100 Sobic009G162300--Sobic006G003100 Sobic003G257400 Sobic003G257400 Sobic009G162300--Sobic003G257400 Sobic009G162300--Sobic004G047600 Sobic003G227700--Sobic010G069900 Sobic003G227700--Sobic003G257400 Sobic010G071400 Sobic010G071400 Sobic003G227700--Sobic010G071400 Sobic003G227700--Sobic006G003100 Sobic001G006201 Sobic001G006201 Sobic003G227700--Sobic001G006201 Sobic007G158800 Sobic007G158800 Sobic003G227700--Sobic007G158800 Sobic003G000100 Sobic003G000100 Sobic003G227700--Sobic003G000100 Sobic010G152400 Sobic010G152400 Sobic003G227700--Sobic010G152400 Sobic004G106100 Sobic004G106100 Sobic003G227700--Sobic004G106100 Sobic001G360700--Sobic004G047600 Sobic001G360700--Sobic007G047300 Sobic002G167600 Sobic002G167600 Sobic001G360700--Sobic002G167600 Sobic001G360700--Sobic002G203900 Sobic001G360700--Sobic001G471800 Sobic002G254900 Sobic002G254900 Sobic001G360700--Sobic002G254900 Sobic001G360700--Sobic002G146000 Sobic004G193500 Sobic004G193500 Sobic001G360700--Sobic004G193500 Sobic001G360700--Sobic001G072600 Sobic002G207200--Sobic007G047300 Sobic002G207200--Sobic004G047600 Sobic002G207200--Sobic001G360700 Sobic002G207200--Sobic003G352700 Sobic002G207200--Sobic002G218900 Sobic002G207200--Sobic002G167600 Sobic001G460400 Sobic001G460400 Sobic002G207200--Sobic001G460400 Sobic002G207200--Sobic004G111100 Sobic002G207200--Sobic009G034300 Sobic001G072600--Sobic002G167600 Sobic001G072600--Sobic002G218900 Sobic007G119500 Sobic007G119500 Sobic001G072600--Sobic007G119500 Sobic001G072600--Sobic001G360700 Sobic001G072600--Sobic004G047600 Sobic006G144600 Sobic006G144600 Sobic001G072600--Sobic006G144600 Sobic001G072600--Sobic009G246700 Sobic001G072600--Sobic007G047300 Sobic009G170500 Sobic009G170500 Sobic001G072600--Sobic009G170500 Sobic001G360800 Sobic001G360800 Sobic009G034300--Sobic001G360800 Sobic004G221300 Sobic004G221300 Sobic009G034300--Sobic004G221300 Sobic001G224300 Sobic001G224300 Sobic009G034300--Sobic001G224300 Sobic003G410800 Sobic003G410800 Sobic009G034300--Sobic003G410800 Sobic009G034300--Sobic002G203900 Sobic006G036400 Sobic006G036400 Sobic009G034300--Sobic006G036400 Sobic009G034300--Sobic002G167600 Sobic001G409100 Sobic001G409100 Sobic009G034300--Sobic001G409100 Sobic010G180100 Sobic010G180100 Sobic009G034300--Sobic010G180100
Octagon: transcription factors


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