Gene annotation
Transcriptome id Sobic.004G070500.1,Sobic.004G070500.2
Synonym
Functional annotation expressed protein
UniProt A0A194YN83 , A0A1Z5RM41
Pfam -
Panther DB PTHR30353 PTHR30353:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G13150 : -
RAP-DB (Rice) LOC_Os02g09440.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium PNT66054
Barley -
Wheat TraesCS6A02G174200 , TraesCS6A02G174200 , TraesCS6A02G174200 , TraesCS6B02G202800 , TraesCS6B02G202800 , TraesCS6D02G163300 , TraesCS6D02G163300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G375100 AAA-type ATPase family protein, putative, expressed -
2 Sobic.007G010700 OsFBL6 - F-box domain and LRR containing protein, expressed -
3 Sobic.003G146500 red chlorophyll catabolite reductase, putative, expressed K13545: RCCR, red chlorophyll catabolite reductase
4 Sobic.004G034600 hydrolase, alpha/beta fold family domain containing protein, expressed -
5 Sobic.004G325100 transmembrane amino acid transporter protein, putative, expressed K15015: SLC32A, solute carrier family 32 (vesicular inhibitory amino acid transporter)
6 Sobic.002G124600 RNA recognition motif family protein, expressed K13094: RNA-binding protein 5/10
7 Sobic.003G247500 expressed protein -
8 Sobic.007G193700 Sua5/YciO/YrdC/YwlC family protein, putative, expressed -
9 Sobic.005G053200 pollen signalling protein with adenylyl cyclase activity, putative, expressed -
10 Sobic.007G090403 - -
11 Sobic.001G454500 potyvirus VPg interacting protein, putative, expressed -
12 Sobic.005G149200 ABC1 family domain containing protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
13 Sobic.005G110300 - -
14 Sobic.007G106800 nucleolar protein NOP5, putative, expressed -
15 Sobic.008G001200 RNA recognition motif containing protein, putative, expressed -
16 Sobic.003G396200 expressed protein K13146: integrator complex subunit 9
17 Sobic.004G174200 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12813: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
18 Sobic.002G249300 auxin efflux carrier component, putative, expressed -
19 Sobic.004G334300 ATMAK10, putative, expressed -
20 Sobic.003G186000 WD domain, G-beta repeat domain containing protein, expressed -


Gene co-expression network
sample Sobic004G070500 Sobic004G070500 Sobic001G375100 Sobic001G375100 Sobic004G070500--Sobic001G375100 Sobic007G010700 Sobic007G010700 Sobic004G070500--Sobic007G010700 Sobic003G146500 Sobic003G146500 Sobic004G070500--Sobic003G146500 Sobic004G034600 Sobic004G034600 Sobic004G070500--Sobic004G034600 Sobic004G325100 Sobic004G325100 Sobic004G070500--Sobic004G325100 Sobic002G124600 Sobic002G124600 Sobic004G070500--Sobic002G124600 Sobic003G247500 Sobic003G247500 Sobic004G070500--Sobic003G247500 Sobic007G193700 Sobic007G193700 Sobic004G070500--Sobic007G193700 Sobic005G053200 Sobic005G053200 Sobic004G070500--Sobic005G053200 Sobic003G155100 Sobic003G155100 Sobic001G375100--Sobic003G155100 Sobic008G001200 Sobic008G001200 Sobic001G375100--Sobic008G001200 Sobic005G149200 Sobic005G149200 Sobic001G375100--Sobic005G149200 Sobic001G375100--Sobic003G247500 Sobic001G454500 Sobic001G454500 Sobic001G375100--Sobic001G454500 Sobic010G010700 Sobic010G010700 Sobic001G375100--Sobic010G010700 Sobic002G008900 Sobic002G008900 Sobic001G375100--Sobic002G008900 Sobic007G198300 Sobic007G198300 Sobic001G375100--Sobic007G198300 Sobic005G001000 Sobic005G001000 Sobic001G375100--Sobic005G001000 Sobic007G010700--Sobic004G070500 Sobic007G010700--Sobic005G053200 Sobic001G000501 Sobic001G000501 Sobic007G010700--Sobic001G000501 Sobic004G253700 Sobic004G253700 Sobic007G010700--Sobic004G253700 Sobic007G010700--Sobic004G034600 Sobic005G133600 Sobic005G133600 Sobic007G010700--Sobic005G133600 Sobic003G061200 Sobic003G061200 Sobic007G010700--Sobic003G061200 Sobic002G249300 Sobic002G249300 Sobic007G010700--Sobic002G249300 Sobic005G089400 Sobic005G089400 Sobic007G010700--Sobic005G089400 Sobic002G118200 Sobic002G118200 Sobic003G146500--Sobic002G118200 Sobic001G531500 Sobic001G531500 Sobic003G146500--Sobic001G531500 Sobic003G146500--Sobic004G070500 Sobic007G090403 Sobic007G090403 Sobic003G146500--Sobic007G090403 Sobic001G512500 Sobic001G512500 Sobic003G146500--Sobic001G512500 Sobic006G133900 Sobic006G133900 Sobic003G146500--Sobic006G133900 Sobic009G123900 Sobic009G123900 Sobic003G146500--Sobic009G123900 Sobic005G118400 Sobic005G118400 Sobic003G146500--Sobic005G118400 Sobic009G093100 Sobic009G093100 Sobic003G146500--Sobic009G093100 Sobic005G149700 Sobic005G149700 Sobic004G034600--Sobic005G149700 Sobic004G034600--Sobic002G249300 Sobic001G517800 Sobic001G517800 Sobic004G034600--Sobic001G517800 Sobic009G011600 Sobic009G011600 Sobic004G034600--Sobic009G011600 Sobic002G266000 Sobic002G266000 Sobic004G034600--Sobic002G266000 Sobic001G459600 Sobic001G459600 Sobic004G034600--Sobic001G459600 Sobic003G322700 Sobic003G322700 Sobic004G034600--Sobic003G322700 Sobic001G223550 Sobic001G223550 Sobic004G034600--Sobic001G223550 Sobic004G261900 Sobic004G261900 Sobic004G034600--Sobic004G261900 Sobic004G325100--Sobic004G070500 Sobic004G325100--Sobic009G123900 Sobic009G248801 Sobic009G248801 Sobic004G325100--Sobic009G248801 Sobic004G325100--Sobic005G133600 Sobic004G325100--Sobic004G253700 Sobic004G325100--Sobic007G010700 Sobic004G325100--Sobic003G146500 Sobic001G062900 Sobic001G062900 Sobic004G325100--Sobic001G062900 Sobic001G519900 Sobic001G519900 Sobic004G325100--Sobic001G519900 Sobic006G219600 Sobic006G219600 Sobic002G124600--Sobic006G219600 Sobic002G124600--Sobic003G155100 Sobic002G124600--Sobic001G375100 Sobic002G124600--Sobic006G133900 Sobic002G124600--Sobic008G001200 Sobic001G298900 Sobic001G298900 Sobic002G124600--Sobic001G298900 Sobic008G130100 Sobic008G130100 Sobic002G124600--Sobic008G130100 Sobic004G174200 Sobic004G174200 Sobic002G124600--Sobic004G174200 Sobic004G356700 Sobic004G356700 Sobic002G124600--Sobic004G356700 Sobic001G194200 Sobic001G194200 Sobic003G247500--Sobic001G194200 Sobic003G247500--Sobic008G001200 Sobic003G247500--Sobic001G375100 Sobic003G247500--Sobic010G010700 Sobic006G055200 Sobic006G055200 Sobic003G247500--Sobic006G055200 Sobic003G247500--Sobic001G454500 Sobic010G123600 Sobic010G123600 Sobic003G247500--Sobic010G123600 Sobic002G325300 Sobic002G325300 Sobic003G247500--Sobic002G325300 Sobic003G247500--Sobic005G001000 Sobic004G263600 Sobic004G263600 Sobic007G193700--Sobic004G263600 Sobic003G086900 Sobic003G086900 Sobic007G193700--Sobic003G086900 Sobic004G200200 Sobic004G200200 Sobic007G193700--Sobic004G200200 Sobic007G193700--Sobic004G174200 Sobic002G134200 Sobic002G134200 Sobic007G193700--Sobic002G134200 Sobic010G239600 Sobic010G239600 Sobic007G193700--Sobic010G239600 Sobic003G139900 Sobic003G139900 Sobic007G193700--Sobic003G139900 Sobic007G193700--Sobic003G247500 Sobic003G396200 Sobic003G396200 Sobic007G193700--Sobic003G396200 Sobic005G053200--Sobic007G010700 Sobic005G053200--Sobic004G070500 Sobic005G053200--Sobic002G249300 Sobic003G174301 Sobic003G174301 Sobic005G053200--Sobic003G174301 Sobic005G053200--Sobic001G000501 Sobic005G053200--Sobic009G248801 Sobic005G053200--Sobic005G133600 Sobic010G227800 Sobic010G227800 Sobic005G053200--Sobic010G227800 Sobic005G053200--Sobic005G089400
Octagon: transcription factors


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