Gene annotation
Transcriptome id Sobic.003G053600.1
Synonym Sb03g004630
Functional annotation hydrolase, alpha/beta fold family protein, putative, expressed
UniProt C5XNH3
Pfam PF12697
Panther DB PTHR10992 PTHR10992:SF858
NCBI CDD KOG1454; Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily)
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G21950 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os01g07420.1 : hydrolase, alpha/beta fold family protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU3Hr1G017100.3 , HORVU3Hr1G017100.1 , HORVU3Hr1G017100.2 , HORVU3Hr1G017100.4
Wheat TraesCS3B02G110600 , TraesCS3A02G095100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G353200 similar to Putative laccase(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Laccase 2 LAC2 (Os)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
2 Sobic.005G063400 male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
3 Sobic.006G174300 cis-zeatin O-glucosyltransferase, putative, expressed K13495: cis-zeatin O-glucosyltransferase
4 Sobic.010G031700 thaumatin, putative, expressed -
5 Sobic.006G277700 peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.002G146000 "Localized in cytoplasm, involved in the process of drought defense"(PubMedID : 27231650)@dehydrogenase, putative, expressed K09753: cinnamoyl-CoA reductase
7 Sobic.007G057400 - -
8 Sobic.005G206000 dirigent, putative, expressed -
9 Sobic.008G164450 - -
10 Sobic.004G009400 transporter, major facilitator family, putative, expressed K02575: NRT, narK, nrtP, MFS transporter, NNP family, nitrate/nitrite transporter
11 Sobic.007G037600 C4-dicarboxylate transporter/malic acid transport protein, expressed -
12 Sobic.002G101400 erythronate-4-phosphate dehydrogenase domain containing protein, expressed -
13 Sobic.007G073000 - -
14 Sobic.002G053700 auxin-induced protein 5NG4, putative, expressed -
15 Sobic.003G000100 STIGL1 - Stigma-specific Stig1 family protein precursor, expressed -
16 Sobic.006G092700 MLO domain containing protein, putative, expressed K08472: mlo protein
17 Sobic.006G003100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1295 domain containing protein, putative, expressed -
18 Sobic.009G181600 indole-3-acetate beta-glucosyltransferase, putative, expressed -
19 Sobic.001G379400 peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.001G360500 peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic003G053600 Sobic003G053600 Sobic003G353200 Sobic003G353200 Sobic003G053600--Sobic003G353200 Sobic005G063400 Sobic005G063400 Sobic003G053600--Sobic005G063400 Sobic006G174300 Sobic006G174300 Sobic003G053600--Sobic006G174300 Sobic010G031700 Sobic010G031700 Sobic003G053600--Sobic010G031700 Sobic006G277700 Sobic006G277700 Sobic003G053600--Sobic006G277700 Sobic002G146000 Sobic002G146000 Sobic003G053600--Sobic002G146000 Sobic007G057400 Sobic007G057400 Sobic003G053600--Sobic007G057400 Sobic005G206000 Sobic005G206000 Sobic003G053600--Sobic005G206000 Sobic008G164450 Sobic008G164450 Sobic003G053600--Sobic008G164450 Sobic007G037600 Sobic007G037600 Sobic003G353200--Sobic007G037600 Sobic003G280000 Sobic003G280000 Sobic003G353200--Sobic003G280000 Sobic003G353200--Sobic002G146000 Sobic003G353200--Sobic010G031700 Sobic005G202300 Sobic005G202300 Sobic003G353200--Sobic005G202300 Sobic003G353200--Sobic003G053600 Sobic006G106900 Sobic006G106900 Sobic003G353200--Sobic006G106900 Sobic001G218400 Sobic001G218400 Sobic003G353200--Sobic001G218400 Sobic009G162300 Sobic009G162300 Sobic003G353200--Sobic009G162300 Sobic005G063400--Sobic003G053600 Sobic002G053700 Sobic002G053700 Sobic005G063400--Sobic002G053700 Sobic004G009400 Sobic004G009400 Sobic005G063400--Sobic004G009400 Sobic005G063400--Sobic007G057400 Sobic006G122800 Sobic006G122800 Sobic005G063400--Sobic006G122800 Sobic002G101400 Sobic002G101400 Sobic005G063400--Sobic002G101400 Sobic005G063400--Sobic006G277700 Sobic009G088500 Sobic009G088500 Sobic005G063400--Sobic009G088500 Sobic005G063400--Sobic006G174300 Sobic006G174300--Sobic006G277700 Sobic006G174300--Sobic005G202300 Sobic001G058300 Sobic001G058300 Sobic006G174300--Sobic001G058300 Sobic006G174300--Sobic003G053600 Sobic003G319400 Sobic003G319400 Sobic006G174300--Sobic003G319400 Sobic006G174300--Sobic003G353200 Sobic006G174300--Sobic010G031700 Sobic001G379400 Sobic001G379400 Sobic006G174300--Sobic001G379400 Sobic002G377700 Sobic002G377700 Sobic006G174300--Sobic002G377700 Sobic003G053200 Sobic003G053200 Sobic010G031700--Sobic003G053200 Sobic010G031700--Sobic007G037600 Sobic003G441800 Sobic003G441800 Sobic010G031700--Sobic003G441800 Sobic004G106100 Sobic004G106100 Sobic010G031700--Sobic004G106100 Sobic004G029400 Sobic004G029400 Sobic010G031700--Sobic004G029400 Sobic006G003100 Sobic006G003100 Sobic010G031700--Sobic006G003100 Sobic006G205700 Sobic006G205700 Sobic010G031700--Sobic006G205700 Sobic002G233200 Sobic002G233200 Sobic010G031700--Sobic002G233200 Sobic010G031700--Sobic003G353200 Sobic006G277700--Sobic006G174300 Sobic006G277700--Sobic002G053700 Sobic006G277700--Sobic001G379400 Sobic006G277700--Sobic003G053600 Sobic003G337600 Sobic003G337600 Sobic006G277700--Sobic003G337600 Sobic006G277700--Sobic010G031700 Sobic002G377600 Sobic002G377600 Sobic006G277700--Sobic002G377600 Sobic003G020200 Sobic003G020200 Sobic006G277700--Sobic003G020200 Sobic010G147200 Sobic010G147200 Sobic006G277700--Sobic010G147200 Sobic007G073000 Sobic007G073000 Sobic002G146000--Sobic007G073000 Sobic006G092700 Sobic006G092700 Sobic002G146000--Sobic006G092700 Sobic002G146000--Sobic007G037600 Sobic002G146000--Sobic003G353200 Sobic003G000100 Sobic003G000100 Sobic002G146000--Sobic003G000100 Sobic006G085700 Sobic006G085700 Sobic002G146000--Sobic006G085700 Sobic002G146000--Sobic010G031700 Sobic003G215300 Sobic003G215300 Sobic002G146000--Sobic003G215300 Sobic002G146000--Sobic004G106100 Sobic001G360500 Sobic001G360500 Sobic007G057400--Sobic001G360500 Sobic010G113100 Sobic010G113100 Sobic007G057400--Sobic010G113100 Sobic007G057400--Sobic003G053600 Sobic007G057400--Sobic009G088500 Sobic007G057400--Sobic002G101400 Sobic007G057400--Sobic005G063400 Sobic006G003600 Sobic006G003600 Sobic007G057400--Sobic006G003600 Sobic007G057400--Sobic006G092700 Sobic007G057400--Sobic008G164450 Sobic001G301000 Sobic001G301000 Sobic005G206000--Sobic001G301000 Sobic010G268700 Sobic010G268700 Sobic005G206000--Sobic010G268700 Sobic008G010500 Sobic008G010500 Sobic005G206000--Sobic008G010500 Sobic001G231800 Sobic001G231800 Sobic005G206000--Sobic001G231800 Sobic005G177100 Sobic005G177100 Sobic005G206000--Sobic005G177100 Sobic010G245400 Sobic010G245400 Sobic005G206000--Sobic010G245400 Sobic006G097900 Sobic006G097900 Sobic005G206000--Sobic006G097900 Sobic005G206000--Sobic003G053600 Sobic004G002901 Sobic004G002901 Sobic005G206000--Sobic004G002901 Sobic009G181600 Sobic009G181600 Sobic008G164450--Sobic009G181600 Sobic001G506800 Sobic001G506800 Sobic008G164450--Sobic001G506800 Sobic008G164450--Sobic006G092700 Sobic008G164450--Sobic002G146000 Sobic008G164450--Sobic010G113100 Sobic006G135300 Sobic006G135300 Sobic008G164450--Sobic006G135300 Sobic010G028100 Sobic010G028100 Sobic008G164450--Sobic010G028100 Sobic008G164450--Sobic006G003600 Sobic008G164450--Sobic007G037600
Octagon: transcription factors


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