Gene annotation
Transcriptome id Sobic.002G053700.3,Sobic.002G053700.2,Sobic.002G053700.4,Sobic.002G053700.5
Synonym
Functional annotation auxin-induced protein 5NG4, putative, expressed
UniProt A0A1W0W2F1 , A0A1B6Q9D1
Pfam PF00892
Panther DB PTHR31218 PTHR31218:SF34
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT5G64700 : nodulin MtN21 /EamA-like transporter family protein
RAP-DB (Rice) LOC_Os01g36580.1 : auxin-induced protein 5NG4, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK08242
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G277700 peroxidase precursor, putative, expressed K00430: peroxidase
2 Sobic.005G063400 male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
3 Sobic.003G053600 hydrolase, alpha/beta fold family protein, putative, expressed -
4 Sobic.001G379400 peroxidase precursor, putative, expressed K00430: peroxidase
5 Sobic.006G122800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -
6 Sobic.001G301300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expansin precursor, putative, expressed -
7 Sobic.006G174300 cis-zeatin O-glucosyltransferase, putative, expressed K13495: cis-zeatin O-glucosyltransferase
8 Sobic.002G050300 LTPL100 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
9 Sobic.004G009400 transporter, major facilitator family, putative, expressed K02575: NRT, narK, nrtP, MFS transporter, NNP family, nitrate/nitrite transporter
10 Sobic.002G261500 AIR12, putative, expressed -
11 Sobic.010G147200 aluminum-activated malate transporter, putative, expressed -
12 Sobic.002G425000 VQ domain containing protein, putative, expressed -
13 Sobic.001G238300 expansin precursor, putative, expressed -
14 Sobic.010G161800 peroxidase precursor, putative, expressed K00430: peroxidase
15 Sobic.002G377700 caltractin, putative, expressed -
16 Sobic.010G031700 thaumatin, putative, expressed -
17 Sobic.007G057400 - -
18 Sobic.003G337600 WRKY116, expressed -
19 Sobic.003G020200 GDSL-like lipase/acylhydrolase, putative, expressed -
20 Sobic.005G066432 - -


Gene co-expression network
sample Sobic002G053700 Sobic002G053700 Sobic006G277700 Sobic006G277700 Sobic002G053700--Sobic006G277700 Sobic005G063400 Sobic005G063400 Sobic002G053700--Sobic005G063400 Sobic003G053600 Sobic003G053600 Sobic002G053700--Sobic003G053600 Sobic001G379400 Sobic001G379400 Sobic002G053700--Sobic001G379400 Sobic006G122800 Sobic006G122800 Sobic002G053700--Sobic006G122800 Sobic001G301300 Sobic001G301300 Sobic002G053700--Sobic001G301300 Sobic006G174300 Sobic006G174300 Sobic002G053700--Sobic006G174300 Sobic002G050300 Sobic002G050300 Sobic002G053700--Sobic002G050300 Sobic004G009400 Sobic004G009400 Sobic002G053700--Sobic004G009400 Sobic006G277700--Sobic006G174300 Sobic006G277700--Sobic002G053700 Sobic006G277700--Sobic001G379400 Sobic006G277700--Sobic003G053600 Sobic003G337600 Sobic003G337600 Sobic006G277700--Sobic003G337600 Sobic010G031700 Sobic010G031700 Sobic006G277700--Sobic010G031700 Sobic002G377600 Sobic002G377600 Sobic006G277700--Sobic002G377600 Sobic003G020200 Sobic003G020200 Sobic006G277700--Sobic003G020200 Sobic010G147200 Sobic010G147200 Sobic006G277700--Sobic010G147200 Sobic005G063400--Sobic003G053600 Sobic005G063400--Sobic002G053700 Sobic005G063400--Sobic004G009400 Sobic007G057400 Sobic007G057400 Sobic005G063400--Sobic007G057400 Sobic005G063400--Sobic006G122800 Sobic002G101400 Sobic002G101400 Sobic005G063400--Sobic002G101400 Sobic005G063400--Sobic006G277700 Sobic009G088500 Sobic009G088500 Sobic005G063400--Sobic009G088500 Sobic005G063400--Sobic006G174300 Sobic003G353200 Sobic003G353200 Sobic003G053600--Sobic003G353200 Sobic003G053600--Sobic005G063400 Sobic003G053600--Sobic006G174300 Sobic003G053600--Sobic010G031700 Sobic003G053600--Sobic006G277700 Sobic002G146000 Sobic002G146000 Sobic003G053600--Sobic002G146000 Sobic003G053600--Sobic007G057400 Sobic005G206000 Sobic005G206000 Sobic003G053600--Sobic005G206000 Sobic008G164450 Sobic008G164450 Sobic003G053600--Sobic008G164450 Sobic006G089000 Sobic006G089000 Sobic001G379400--Sobic006G089000 Sobic001G379400--Sobic010G147200 Sobic005G160700 Sobic005G160700 Sobic001G379400--Sobic005G160700 Sobic001G379400--Sobic006G277700 Sobic006G079300 Sobic006G079300 Sobic001G379400--Sobic006G079300 Sobic001G234900 Sobic001G234900 Sobic001G379400--Sobic001G234900 Sobic001G379400--Sobic003G337600 Sobic001G379400--Sobic006G174300 Sobic006G003100 Sobic006G003100 Sobic001G379400--Sobic006G003100 Sobic003G384700 Sobic003G384700 Sobic006G122800--Sobic003G384700 Sobic002G042200 Sobic002G042200 Sobic006G122800--Sobic002G042200 Sobic002G425000 Sobic002G425000 Sobic006G122800--Sobic002G425000 Sobic006G122800--Sobic002G053700 Sobic006G122800--Sobic005G063400 Sobic010G161800 Sobic010G161800 Sobic006G122800--Sobic010G161800 Sobic006G260200 Sobic006G260200 Sobic006G122800--Sobic006G260200 Sobic006G122800--Sobic006G174300 Sobic006G251400 Sobic006G251400 Sobic006G122800--Sobic006G251400 Sobic001G301300--Sobic002G053700 Sobic001G238200 Sobic001G238200 Sobic001G301300--Sobic001G238200 Sobic001G058300 Sobic001G058300 Sobic001G301300--Sobic001G058300 Sobic001G301300--Sobic005G063400 Sobic002G377700 Sobic002G377700 Sobic001G301300--Sobic002G377700 Sobic006G172601 Sobic006G172601 Sobic001G301300--Sobic006G172601 Sobic001G238300 Sobic001G238300 Sobic001G301300--Sobic001G238300 Sobic001G301300--Sobic006G122800 Sobic001G301300--Sobic007G057400 Sobic006G174300--Sobic006G277700 Sobic005G202300 Sobic005G202300 Sobic006G174300--Sobic005G202300 Sobic006G174300--Sobic001G058300 Sobic006G174300--Sobic003G053600 Sobic003G319400 Sobic003G319400 Sobic006G174300--Sobic003G319400 Sobic006G174300--Sobic003G353200 Sobic006G174300--Sobic010G031700 Sobic006G174300--Sobic001G379400 Sobic006G174300--Sobic002G377700 Sobic003G368100 Sobic003G368100 Sobic002G050300--Sobic003G368100 Sobic001G068500 Sobic001G068500 Sobic002G050300--Sobic001G068500 Sobic001G059600 Sobic001G059600 Sobic002G050300--Sobic001G059600 Sobic010G093300 Sobic010G093300 Sobic002G050300--Sobic010G093300 Sobic001G059500 Sobic001G059500 Sobic002G050300--Sobic001G059500 Sobic002G050300--Sobic002G053700 Sobic002G050300--Sobic001G379400 Sobic002G050300--Sobic005G160700 Sobic003G341500 Sobic003G341500 Sobic002G050300--Sobic003G341500 Sobic004G009400--Sobic005G063400 Sobic004G009400--Sobic003G053600 Sobic004G009400--Sobic002G053700 Sobic004G009400--Sobic007G057400 Sobic004G009400--Sobic006G277700 Sobic007G015200 Sobic007G015200 Sobic004G009400--Sobic007G015200 Sobic003G322100 Sobic003G322100 Sobic004G009400--Sobic003G322100 Sobic005G066432 Sobic005G066432 Sobic004G009400--Sobic005G066432 Sobic001G360500 Sobic001G360500 Sobic004G009400--Sobic001G360500
Octagon: transcription factors


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