Gene annotation
Transcriptome id Sobic.003G044200.1
Synonym NTMC2TYPE6.1, Sb03g003880, NTMC2T6.1
Functional annotation C2 domain containing protein, putative, expressed
UniProt C5XMR2
Pfam PF00168
Panther DB PTHR10774 PTHR10774:SF80
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G53590 : Calcium-dependent lipid-binding (CaLB domain) family protein
RAP-DB (Rice) LOC_Os01g14050.1 : C2 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a035754
Brachypodium KQK03544 , PNT70238
Barley HORVU3Hr1G033370.33 , HORVU3Hr1G033370.32 , HORVU3Hr1G033370.31 , HORVU3Hr1G033370.30 , HORVU3Hr1G033370.35 , HORVU3Hr1G033370.34 , HORVU3Hr1G033370.20 , HORVU3Hr1G033370.21 , HORVU3Hr1G033370.22 , HORVU3Hr1G033370.23 , HORVU3Hr1G033370.24 , HORVU3Hr1G033370.25 , HORVU3Hr1G033370.26 , HORVU3Hr1G033370.27 , HORVU3Hr1G033370.28 , HORVU3Hr1G033370.29 , HORVU3Hr1G033370.3 , HORVU3Hr1G033370.4
Wheat TraesCS2D02G148300 , TraesCS3D02G171600 , TraesCS3D02G171600 , TraesCS3A02G170300 , TraesCS3A02G170300 , TraesCS2B02G169300 , TraesCS3B02G196300 , TraesCS3B02G196300 , TraesCS3B02G196300 , TraesCS2A02G144400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G065700 glycine-rich protein, putative, expressed K13344: peroxin-13
2 Sobic.001G098200 magnesium-dependent phosphatase 1, putative, expressed K17619: magnesium-dependent phosphatase 1
3 Sobic.006G225600 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
4 Sobic.005G105000 STE_MEKK_ste11_MAP3K.3 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
5 Sobic.006G218700 tyrosine protein kinase domain containing protein, putative, expressed -
6 Sobic.009G167600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
7 Sobic.001G503300 tyrosine protein kinase domain containing protein, putative, expressed -
8 Sobic.009G137800 expressed protein -
9 Sobic.009G193400 AGC_AGC_other_NDRh_TRCd.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed K08790: STK38, serine/threonine kinase 38
10 Sobic.003G433100 MAC/Perforin domain containing protein, putative, expressed -
11 Sobic.004G234900 membrane-anchored ubiquitin-fold protein, putative, expressed -
12 Sobic.003G379700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Increased expression in phyB-1 mutant(PubMedID : 26893475)@No apical meristem protein, putative, expressed -
13 Sobic.001G162100 WRKY94, expressed -
14 Sobic.004G153600 exo70 exocyst complex subunit domain containing protein, expressed K07195: EXOC7, exocyst complex component 7
15 Sobic.001G290200 leucine rich repeat containing protein, expressed -
16 Sobic.010G174500 protein kinase family protein, putative, expressed -
17 Sobic.003G119800 Expressed in older stem(PubMedID : 28649278)@no apical meristem protein, putative, expressed -
18 Sobic.009G011700 protein kinase APK1A, chloroplast precursor, putative, expressed K04733: interleukin-1 receptor-associated kinase 4
19 Sobic.009G059700 thioredoxin, putative, expressed K03671: thioredoxin 1
20 Sobic.004G267300 bg55, putative, expressed -


Gene co-expression network
sample Sobic003G044200 Sobic003G044200 Sobic001G065700 Sobic001G065700 Sobic003G044200--Sobic001G065700 Sobic001G098200 Sobic001G098200 Sobic003G044200--Sobic001G098200 Sobic006G225600 Sobic006G225600 Sobic003G044200--Sobic006G225600 Sobic005G105000 Sobic005G105000 Sobic003G044200--Sobic005G105000 Sobic006G218700 Sobic006G218700 Sobic003G044200--Sobic006G218700 Sobic009G167600 Sobic009G167600 Sobic003G044200--Sobic009G167600 Sobic001G503300 Sobic001G503300 Sobic003G044200--Sobic001G503300 Sobic009G137800 Sobic009G137800 Sobic003G044200--Sobic009G137800 Sobic009G193400 Sobic009G193400 Sobic003G044200--Sobic009G193400 Sobic001G065700--Sobic003G044200 Sobic010G055500 Sobic010G055500 Sobic001G065700--Sobic010G055500 Sobic001G065700--Sobic006G225600 Sobic001G512900 Sobic001G512900 Sobic001G065700--Sobic001G512900 Sobic001G065700--Sobic009G193400 Sobic002G365100 Sobic002G365100 Sobic001G065700--Sobic002G365100 Sobic001G065700--Sobic001G098200 Sobic003G051200 Sobic003G051200 Sobic001G065700--Sobic003G051200 Sobic004G253000 Sobic004G253000 Sobic001G065700--Sobic004G253000 Sobic004G234900 Sobic004G234900 Sobic001G098200--Sobic004G234900 Sobic001G098200--Sobic006G225600 Sobic001G098200--Sobic004G253000 Sobic002G251700 Sobic002G251700 Sobic001G098200--Sobic002G251700 Sobic010G090900 Sobic010G090900 Sobic001G098200--Sobic010G090900 Sobic003G050600 Sobic003G050600 Sobic001G098200--Sobic003G050600 Sobic004G301900 Sobic004G301900 Sobic001G098200--Sobic004G301900 Sobic001G051200 Sobic001G051200 Sobic001G098200--Sobic001G051200 Sobic001G098200--Sobic003G044200 Sobic006G225600--Sobic004G234900 Sobic006G225600--Sobic002G251700 Sobic001G162100 Sobic001G162100 Sobic006G225600--Sobic001G162100 Sobic006G225600--Sobic001G098200 Sobic003G295400 Sobic003G295400 Sobic006G225600--Sobic003G295400 Sobic002G122700 Sobic002G122700 Sobic006G225600--Sobic002G122700 Sobic004G274400 Sobic004G274400 Sobic006G225600--Sobic004G274400 Sobic006G225600--Sobic001G051200 Sobic001G434900 Sobic001G434900 Sobic006G225600--Sobic001G434900 Sobic009G138100 Sobic009G138100 Sobic005G105000--Sobic009G138100 Sobic009G172400 Sobic009G172400 Sobic005G105000--Sobic009G172400 Sobic010G174500 Sobic010G174500 Sobic005G105000--Sobic010G174500 Sobic005G105000--Sobic003G044200 Sobic001G472600 Sobic001G472600 Sobic005G105000--Sobic001G472600 Sobic003G379700 Sobic003G379700 Sobic005G105000--Sobic003G379700 Sobic006G209400 Sobic006G209400 Sobic005G105000--Sobic006G209400 Sobic003G248200 Sobic003G248200 Sobic005G105000--Sobic003G248200 Sobic004G267300 Sobic004G267300 Sobic005G105000--Sobic004G267300 Sobic009G134600 Sobic009G134600 Sobic006G218700--Sobic009G134600 Sobic003G396000 Sobic003G396000 Sobic006G218700--Sobic003G396000 Sobic006G218700--Sobic003G044200 Sobic003G119800 Sobic003G119800 Sobic006G218700--Sobic003G119800 Sobic006G218700--Sobic003G379700 Sobic001G076000 Sobic001G076000 Sobic006G218700--Sobic001G076000 Sobic006G218700--Sobic009G167600 Sobic003G056500 Sobic003G056500 Sobic006G218700--Sobic003G056500 Sobic003G376700 Sobic003G376700 Sobic006G218700--Sobic003G376700 Sobic009G167600--Sobic003G119800 Sobic005G104400 Sobic005G104400 Sobic009G167600--Sobic005G104400 Sobic009G167600--Sobic003G044200 Sobic009G167600--Sobic006G218700 Sobic002G400200 Sobic002G400200 Sobic009G167600--Sobic002G400200 Sobic008G025900 Sobic008G025900 Sobic009G167600--Sobic008G025900 Sobic010G025300 Sobic010G025300 Sobic009G167600--Sobic010G025300 Sobic003G433100 Sobic003G433100 Sobic009G167600--Sobic003G433100 Sobic009G167600--Sobic009G134600 Sobic001G503300--Sobic010G174500 Sobic001G503300--Sobic004G234900 Sobic001G503300--Sobic001G098200 Sobic001G503300--Sobic006G209400 Sobic003G413500 Sobic003G413500 Sobic001G503300--Sobic003G413500 Sobic001G516100 Sobic001G516100 Sobic001G503300--Sobic001G516100 Sobic001G414500 Sobic001G414500 Sobic001G503300--Sobic001G414500 Sobic006G092400 Sobic006G092400 Sobic001G503300--Sobic006G092400 Sobic001G503300--Sobic003G044200 Sobic004G153600 Sobic004G153600 Sobic009G137800--Sobic004G153600 Sobic008G189400 Sobic008G189400 Sobic009G137800--Sobic008G189400 Sobic009G137800--Sobic004G267300 Sobic003G185200 Sobic003G185200 Sobic009G137800--Sobic003G185200 Sobic009G137800--Sobic008G025900 Sobic001G424700 Sobic001G424700 Sobic009G137800--Sobic001G424700 Sobic009G087800 Sobic009G087800 Sobic009G137800--Sobic009G087800 Sobic001G022100 Sobic001G022100 Sobic009G137800--Sobic001G022100 Sobic010G260500 Sobic010G260500 Sobic009G137800--Sobic010G260500 Sobic003G007500 Sobic003G007500 Sobic009G193400--Sobic003G007500 Sobic009G193400--Sobic003G433100 Sobic009G171700 Sobic009G171700 Sobic009G193400--Sobic009G171700 Sobic008G180900 Sobic008G180900 Sobic009G193400--Sobic008G180900 Sobic009G193400--Sobic003G295400 Sobic004G104900 Sobic004G104900 Sobic009G193400--Sobic004G104900 Sobic001G478300 Sobic001G478300 Sobic009G193400--Sobic001G478300 Sobic002G413000 Sobic002G413000 Sobic009G193400--Sobic002G413000 Sobic010G083700 Sobic010G083700 Sobic009G193400--Sobic010G083700
Octagon: transcription factors


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