Gene annotation
Transcriptome id Sobic.002G190300.1
Synonym CYP71B2, Sb02g023770
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
cytochrome P450, putative, expressed
UniProt C5XBH1
Pfam PF00067
Panther DB PTHR24298 PTHR24298:SF108
NCBI CDD KOG0156; Cytochrome P450 CYP2 subfamily
KEGG Orthology -
Gene Ontology GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT1G13080 : cytochrome P450, family 71, subfamily B, polypeptide 2
RAP-DB (Rice) LOC_Os09g36080.1 : cytochrome P450, putative, expressed
MaizeGDB (Corn) Zm00025a052311 , Zm00025a037682 , Zm00025a014421 , Zm00025a046614 , Zm00025a014419 , Zm00025a021329 , Zm00025a031824 , Zm00025a022331
Brachypodium KQJ91155
Barley HORVU5Hr1G081270.1 , HORVU5Hr1G081250.2 , HORVU5Hr1G081210.1 , HORVU5Hr1G081250.1 , HORVU5Hr1G081260.1
Wheat TraesCS5B02G318100 , TraesCS5B02G318100 , TraesCS5A02G318000 , TraesCS5D02G324400 , TraesCS5D02G323900 , TraesCS5B02G318500 , TraesCS5D02G324300 , TraesCS5D02G323800 , TraesCS5A02G317600 , TraesCS5B02G318200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G056500 with no lysine (K) kinase 1(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@STE_PAK_Ste20_Slob_Wnk.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08867: WNK, WNK lysine deficient protein kinase
2 Sobic.010G181100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@FAD binding domain containing protein, expressed -
3 Sobic.009G123900 L1P family of ribosomal proteins domain containing protein, expressed K02863: RP-L1, MRPL1, large subunit ribosomal protein L1
4 Sobic.010G150800 expressed protein -
5 Sobic.002G118200 tetratricopeptide repeat domain containing protein, putative, expressed K03255: TIF31, protein TIF31
6 Sobic.010G275700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
7 Sobic.003G047700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytokinin-O-glucosyltransferase 3, putative, expressed -
8 Sobic.005G101200 ELMO/CED-12 family protein, putative, expressed -
9 Sobic.009G093100 OsAGSW1(Ortholog in rice:Li and Li 2015)(PubMedID : 31659923)@ ELMO/CED-12 family protein, putative, expressed -
10 Sobic.010G099700 peptide transporter PTR2, putative, expressed -
11 Sobic.003G146500 red chlorophyll catabolite reductase, putative, expressed K13545: RCCR, red chlorophyll catabolite reductase
12 Sobic.001G359300 cytochrome P450, putative, expressed -
13 Sobic.005G068700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAD kinase, putative, expressed K00858: ppnK, NAD+ kinase
14 Sobic.001G531500 peroxisomal biogenesis factor 11, putative, expressed -
15 Sobic.007G090403 - -
16 Sobic.009G219100 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@"serine/threonine-protein kinase SNT7, chloroplast precursor"("PubMedID : 26759170,PubMedID : 24597475")@serine/threonine-protein kinase SNT7, chloroplast precursor, putative, expressed -
17 Sobic.001G258200 Ser/Thr protein phosphatase family protein, putative, expressed -
18 Sobic.003G179350 - -
19 Sobic.004G281800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@myb-like DNA-binding domain containing protein, expressed -
20 Sobic.006G214300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Putative leucine-rich repeatcontaining protein DDB_G0290503(PubMedID : 31721651)@- -


Gene co-expression network
sample Sobic002G190300 Sobic002G190300 Sobic002G056500 Sobic002G056500 Sobic002G190300--Sobic002G056500 Sobic010G181100 Sobic010G181100 Sobic002G190300--Sobic010G181100 Sobic009G123900 Sobic009G123900 Sobic002G190300--Sobic009G123900 Sobic010G150800 Sobic010G150800 Sobic002G190300--Sobic010G150800 Sobic002G118200 Sobic002G118200 Sobic002G190300--Sobic002G118200 Sobic010G275700 Sobic010G275700 Sobic002G190300--Sobic010G275700 Sobic003G047700 Sobic003G047700 Sobic002G190300--Sobic003G047700 Sobic005G101200 Sobic005G101200 Sobic002G190300--Sobic005G101200 Sobic009G093100 Sobic009G093100 Sobic002G190300--Sobic009G093100 Sobic005G068700 Sobic005G068700 Sobic002G056500--Sobic005G068700 Sobic008G129900 Sobic008G129900 Sobic002G056500--Sobic008G129900 Sobic002G056500--Sobic005G101200 Sobic001G258200 Sobic001G258200 Sobic002G056500--Sobic001G258200 Sobic003G314000 Sobic003G314000 Sobic002G056500--Sobic003G314000 Sobic001G359300 Sobic001G359300 Sobic002G056500--Sobic001G359300 Sobic010G231300 Sobic010G231300 Sobic002G056500--Sobic010G231300 Sobic007G105500 Sobic007G105500 Sobic002G056500--Sobic007G105500 Sobic003G036200 Sobic003G036200 Sobic002G056500--Sobic003G036200 Sobic010G181100--Sobic005G068700 Sobic010G181100--Sobic002G056500 Sobic010G181100--Sobic002G190300 Sobic010G181100--Sobic001G258200 Sobic004G189800 Sobic004G189800 Sobic010G181100--Sobic004G189800 Sobic010G181100--Sobic009G123900 Sobic010G181100--Sobic005G101200 Sobic007G090403 Sobic007G090403 Sobic010G181100--Sobic007G090403 Sobic009G219100 Sobic009G219100 Sobic010G181100--Sobic009G219100 Sobic009G123900--Sobic002G118200 Sobic009G123900--Sobic005G068700 Sobic009G123900--Sobic002G056500 Sobic009G123900--Sobic003G036200 Sobic001G531500 Sobic001G531500 Sobic009G123900--Sobic001G531500 Sobic004G019800 Sobic004G019800 Sobic009G123900--Sobic004G019800 Sobic002G402700 Sobic002G402700 Sobic009G123900--Sobic002G402700 Sobic007G005400 Sobic007G005400 Sobic009G123900--Sobic007G005400 Sobic004G268300 Sobic004G268300 Sobic009G123900--Sobic004G268300 Sobic010G150800--Sobic010G181100 Sobic010G150800--Sobic002G190300 Sobic001G512500 Sobic001G512500 Sobic010G150800--Sobic001G512500 Sobic010G150800--Sobic002G118200 Sobic010G150800--Sobic009G219100 Sobic010G150800--Sobic001G531500 Sobic009G140000 Sobic009G140000 Sobic010G150800--Sobic009G140000 Sobic004G154400 Sobic004G154400 Sobic010G150800--Sobic004G154400 Sobic010G150800--Sobic009G123900 Sobic002G118200--Sobic007G005400 Sobic005G084500 Sobic005G084500 Sobic002G118200--Sobic005G084500 Sobic002G118200--Sobic001G531500 Sobic003G085100 Sobic003G085100 Sobic002G118200--Sobic003G085100 Sobic002G258600 Sobic002G258600 Sobic002G118200--Sobic002G258600 Sobic002G118200--Sobic009G123900 Sobic002G118200--Sobic004G019800 Sobic002G118200--Sobic009G093100 Sobic008G074000 Sobic008G074000 Sobic002G118200--Sobic008G074000 Sobic003G021100 Sobic003G021100 Sobic010G275700--Sobic003G021100 Sobic010G275700--Sobic005G101200 Sobic004G281800 Sobic004G281800 Sobic010G275700--Sobic004G281800 Sobic001G352400 Sobic001G352400 Sobic010G275700--Sobic001G352400 Sobic010G275700--Sobic004G189800 Sobic002G382700 Sobic002G382700 Sobic010G275700--Sobic002G382700 Sobic001G333800 Sobic001G333800 Sobic010G275700--Sobic001G333800 Sobic002G119100 Sobic002G119100 Sobic010G275700--Sobic002G119100 Sobic009G038900 Sobic009G038900 Sobic010G275700--Sobic009G038900 Sobic003G047700--Sobic002G056500 Sobic002G162400 Sobic002G162400 Sobic003G047700--Sobic002G162400 Sobic005G217000 Sobic005G217000 Sobic003G047700--Sobic005G217000 Sobic003G047700--Sobic002G119100 Sobic003G047700--Sobic003G314000 Sobic009G194500 Sobic009G194500 Sobic003G047700--Sobic009G194500 Sobic003G341300 Sobic003G341300 Sobic003G047700--Sobic003G341300 Sobic003G047700--Sobic008G129900 Sobic007G140700 Sobic007G140700 Sobic003G047700--Sobic007G140700 Sobic005G101200--Sobic004G189800 Sobic005G101200--Sobic005G068700 Sobic002G404800 Sobic002G404800 Sobic005G101200--Sobic002G404800 Sobic005G101200--Sobic001G258200 Sobic005G101200--Sobic009G038900 Sobic005G101200--Sobic007G105500 Sobic003G185900 Sobic003G185900 Sobic005G101200--Sobic003G185900 Sobic010G085100 Sobic010G085100 Sobic005G101200--Sobic010G085100 Sobic005G101200--Sobic004G281800 Sobic001G077300 Sobic001G077300 Sobic009G093100--Sobic001G077300 Sobic009G093100--Sobic001G359300 Sobic009G093100--Sobic004G019800 Sobic006G065100 Sobic006G065100 Sobic009G093100--Sobic006G065100 Sobic001G536700 Sobic001G536700 Sobic009G093100--Sobic001G536700 Sobic009G073900 Sobic009G073900 Sobic009G093100--Sobic009G073900 Sobic001G378100 Sobic001G378100 Sobic009G093100--Sobic001G378100 Sobic002G206300 Sobic002G206300 Sobic009G093100--Sobic002G206300 Sobic009G093100--Sobic001G333800
Octagon: transcription factors


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