Gene annotation
Transcriptome id Sobic.002G091600.2,Sobic.002G091600.1
Synonym Sb02g007590
Functional annotation methyltransferase, putative, expressed
UniProt A0A1W0W2Z5 , C5X231
Pfam PF04072
Panther DB PTHR13600 PTHR13600:SF22
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008168; methyltransferase activity


Orthologs (automatic annotation)
TAIR AT4G02405 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os07g14350.1 : methyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a013612
Brachypodium KQJ91339 , PNT76779 , PNT76778 , KQJ91340 , PNT76780 , PNT76781 , PNT76777 , PNT76776
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G091600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G193700 ASC1, putative, expressed K04710: CERS1_2_3_4, ceramide synthetase
2 Sobic.003G110800 transporter family protein, putative, expressed K08145: SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8
3 Sobic.007G136200 expressed protein -
4 Sobic.003G119600 zinc finger, C3HC4 type domain containing protein, expressed -
5 Sobic.001G097100 -(PubMedID : 26976818)@serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed K00600: glyA, glycine hydroxymethyltransferase
6 Sobic.001G530900 expressed protein -
7 Sobic.005G084500 uncharacterized protein yqxC, putative, expressed K06442: 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase
8 Sobic.009G215500 transcription initiation factor IIB, putative, expressed K15196: BRF1, transcription factor IIIB 90 kDa subunit
9 Sobic.005G106600 CGMC_MAPKCGMC_2.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
10 Sobic.006G173600 serine racemase, putative, expressed K12235: serine racemase
11 Sobic.008G070800 expressed protein -
12 Sobic.001G136800 dual specificity protein phosphatase, putative, expressed -
13 Sobic.001G355800 methyltransferase, putative, expressed -
14 Sobic.010G205100 Sucrose phosphate synthase genes(PubMedID : 24456189)@sucrose phosphate synthase(PubMedID : 26616172)@Sugar synthesis(PubMedID : 27330561)@sucrose-phosphate synthase, putative, expressed K00696: sucrose-phosphate synthase
15 Sobic.002G309900 cupin 2, conserved barrel domain protein, putative, expressed K14977: ylbA, (S)-ureidoglycine aminohydrolase
16 Sobic.006G031800 - -
17 Sobic.002G131200 Ser/Thr protein phosphatase family protein, putative, expressed -
18 Sobic.007G136800 polypyrimidine tract-binding protein, putative, expressed K14948: PTBP2, polypyrimidine tract-binding protein 2
19 Sobic.005G100600 bZIP transcription factor domain containing protein, expressed -
20 Sobic.003G370700 regulation of Al tolerance genes and proton tolerance genes(PubMedID : 29541086)@ZOS1-18 - C2H2 zinc finger protein, expressed -


Gene co-expression network
sample Sobic002G091600 Sobic002G091600 Sobic004G193700 Sobic004G193700 Sobic002G091600--Sobic004G193700 Sobic003G110800 Sobic003G110800 Sobic002G091600--Sobic003G110800 Sobic007G136200 Sobic007G136200 Sobic002G091600--Sobic007G136200 Sobic003G119600 Sobic003G119600 Sobic002G091600--Sobic003G119600 Sobic001G097100 Sobic001G097100 Sobic002G091600--Sobic001G097100 Sobic001G530900 Sobic001G530900 Sobic002G091600--Sobic001G530900 Sobic005G084500 Sobic005G084500 Sobic002G091600--Sobic005G084500 Sobic009G215500 Sobic009G215500 Sobic002G091600--Sobic009G215500 Sobic005G106600 Sobic005G106600 Sobic002G091600--Sobic005G106600 Sobic004G193700--Sobic002G091600 Sobic003G262200 Sobic003G262200 Sobic004G193700--Sobic003G262200 Sobic003G229300 Sobic003G229300 Sobic004G193700--Sobic003G229300 Sobic006G092000 Sobic006G092000 Sobic004G193700--Sobic006G092000 Sobic003G253600 Sobic003G253600 Sobic004G193700--Sobic003G253600 Sobic004G193700--Sobic003G119600 Sobic005G059800 Sobic005G059800 Sobic004G193700--Sobic005G059800 Sobic001G085600 Sobic001G085600 Sobic004G193700--Sobic001G085600 Sobic006G185100 Sobic006G185100 Sobic004G193700--Sobic006G185100 Sobic001G465700 Sobic001G465700 Sobic003G110800--Sobic001G465700 Sobic003G110800--Sobic006G092000 Sobic003G110800--Sobic002G091600 Sobic006G173600 Sobic006G173600 Sobic003G110800--Sobic006G173600 Sobic006G031800 Sobic006G031800 Sobic003G110800--Sobic006G031800 Sobic004G026500 Sobic004G026500 Sobic003G110800--Sobic004G026500 Sobic003G110800--Sobic001G530900 Sobic001G003200 Sobic001G003200 Sobic003G110800--Sobic001G003200 Sobic006G158100 Sobic006G158100 Sobic003G110800--Sobic006G158100 Sobic007G136200--Sobic006G158100 Sobic010G043800 Sobic010G043800 Sobic007G136200--Sobic010G043800 Sobic001G504400 Sobic001G504400 Sobic007G136200--Sobic001G504400 Sobic010G002700 Sobic010G002700 Sobic007G136200--Sobic010G002700 Sobic007G103400 Sobic007G103400 Sobic007G136200--Sobic007G103400 Sobic001G169900 Sobic001G169900 Sobic007G136200--Sobic001G169900 Sobic004G337400 Sobic004G337400 Sobic007G136200--Sobic004G337400 Sobic007G108900 Sobic007G108900 Sobic007G136200--Sobic007G108900 Sobic001G378100 Sobic001G378100 Sobic007G136200--Sobic001G378100 Sobic009G201300 Sobic009G201300 Sobic003G119600--Sobic009G201300 Sobic001G439300 Sobic001G439300 Sobic003G119600--Sobic001G439300 Sobic002G325300 Sobic002G325300 Sobic003G119600--Sobic002G325300 Sobic004G244900 Sobic004G244900 Sobic003G119600--Sobic004G244900 Sobic002G257750 Sobic002G257750 Sobic003G119600--Sobic002G257750 Sobic003G119600--Sobic005G106600 Sobic004G356700 Sobic004G356700 Sobic003G119600--Sobic004G356700 Sobic003G119600--Sobic003G253600 Sobic003G354600 Sobic003G354600 Sobic003G119600--Sobic003G354600 Sobic010G085100 Sobic010G085100 Sobic001G097100--Sobic010G085100 Sobic010G067100 Sobic010G067100 Sobic001G097100--Sobic010G067100 Sobic003G185900 Sobic003G185900 Sobic001G097100--Sobic003G185900 Sobic008G033000 Sobic008G033000 Sobic001G097100--Sobic008G033000 Sobic004G154200 Sobic004G154200 Sobic001G097100--Sobic004G154200 Sobic001G097100--Sobic002G091600 Sobic005G126300 Sobic005G126300 Sobic001G097100--Sobic005G126300 Sobic003G332700 Sobic003G332700 Sobic001G097100--Sobic003G332700 Sobic008G117000 Sobic008G117000 Sobic001G097100--Sobic008G117000 Sobic001G530900--Sobic010G002700 Sobic001G530900--Sobic009G215500 Sobic001G530900--Sobic001G378100 Sobic007G185700 Sobic007G185700 Sobic001G530900--Sobic007G185700 Sobic005G118400 Sobic005G118400 Sobic001G530900--Sobic005G118400 Sobic001G530900--Sobic005G084500 Sobic001G530900--Sobic003G332700 Sobic001G530900--Sobic001G465700 Sobic003G217700 Sobic003G217700 Sobic001G530900--Sobic003G217700 Sobic007G005400 Sobic007G005400 Sobic005G084500--Sobic007G005400 Sobic002G118200 Sobic002G118200 Sobic005G084500--Sobic002G118200 Sobic004G238200 Sobic004G238200 Sobic005G084500--Sobic004G238200 Sobic005G084500--Sobic004G337400 Sobic006G219600 Sobic006G219600 Sobic005G084500--Sobic006G219600 Sobic004G019800 Sobic004G019800 Sobic005G084500--Sobic004G019800 Sobic004G163800 Sobic004G163800 Sobic005G084500--Sobic004G163800 Sobic005G084500--Sobic001G530900 Sobic001G516901 Sobic001G516901 Sobic005G084500--Sobic001G516901 Sobic009G215500--Sobic001G530900 Sobic008G044100 Sobic008G044100 Sobic009G215500--Sobic008G044100 Sobic004G134200 Sobic004G134200 Sobic009G215500--Sobic004G134200 Sobic003G155100 Sobic003G155100 Sobic009G215500--Sobic003G155100 Sobic009G215500--Sobic006G031800 Sobic009G215500--Sobic006G219600 Sobic001G133000 Sobic001G133000 Sobic009G215500--Sobic001G133000 Sobic009G215500--Sobic001G465700 Sobic006G050700 Sobic006G050700 Sobic009G215500--Sobic006G050700 Sobic003G220100 Sobic003G220100 Sobic005G106600--Sobic003G220100 Sobic001G333800 Sobic001G333800 Sobic005G106600--Sobic001G333800 Sobic009G038900 Sobic009G038900 Sobic005G106600--Sobic009G038900 Sobic005G106600--Sobic001G133000 Sobic004G312600 Sobic004G312600 Sobic005G106600--Sobic004G312600 Sobic007G058100 Sobic007G058100 Sobic005G106600--Sobic007G058100 Sobic005G106600--Sobic007G136200 Sobic005G106600--Sobic006G219600 Sobic005G106600--Sobic001G378100
Octagon: transcription factors


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