Gene annotation
Transcriptome id Sobic.003G110800.2,Sobic.003G110800.1,Sobic.003G110800.3
Synonym Sb03g009310
Functional annotation transporter family protein, putative, expressed
UniProt A0A1W0VWX4 , A0A1W0VWS5 , C5XFP8
Pfam PF07690
Panther DB PTHR23500 PTHR23500:SF62
NCBI CDD KOG0254; Predicted transporter (major facilitator superfamily)
KEGG Orthology K08145; SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT1G54730 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os11g42430.1 : transporter family protein, putative, expressed
MaizeGDB (Corn) Zm00025a035373
Brachypodium KQJ81720 , KQJ81721 , PNT60624
Barley HORVU2Hr1G007130.1 , HORVU2Hr1G007130.3 , HORVU2Hr1G007130.2 , HORVU2Hr1G007130.5 , HORVU2Hr1G007130.4 , HORVU2Hr1G007130.7 , HORVU2Hr1G007130.6 , HORVU2Hr1G007130.9 , HORVU2Hr1G007130.8 , HORVU0Hr1G005200.12 , HORVU0Hr1G005200.11 , HORVU0Hr1G005200.10 , HORVU2Hr1G007130.20 , HORVU2Hr1G007130.21 , HORVU2Hr1G007130.22 , HORVU2Hr1G007130.23 , HORVU2Hr1G088600.49 , HORVU2Hr1G007130.15 , HORVU2Hr1G007130.14 , HORVU2Hr1G007130.17 , HORVU2Hr1G007130.16 , HORVU2Hr1G007130.11 , HORVU2Hr1G007130.10 , HORVU2Hr1G007130.13 , HORVU2Hr1G007130.12 , HORVU2Hr1G007130.19 , HORVU2Hr1G007130.18 , HORVU2Hr1G088600.7 , HORVU0Hr1G005200.9 , HORVU0Hr1G005200.8 , HORVU0Hr1G005200.7 , HORVU0Hr1G005200.6
Wheat TraesCS2B02G058500 , TraesCSU02G196200 , TraesCSU02G196200 , TraesCSU02G191400 , TraesCSU02G191400
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G465700 aminotransferase, putative, expressed K00833: adenosylmethionine---8-amino-7-oxononanoate aminotransferase
2 Sobic.006G092000 expressed protein K18172: COX assembly mitochondrial protein 2
3 Sobic.002G091600 methyltransferase, putative, expressed -
4 Sobic.006G173600 serine racemase, putative, expressed K12235: serine racemase
5 Sobic.006G031800 - -
6 Sobic.004G026500 expressed protein -
7 Sobic.001G530900 expressed protein -
8 Sobic.001G003200 RNApolymerase sigma-subunit F(PubMedID : 26465154)@RNA polymerase sigma factor, putative, expressed K03086: RNA polymerase primary sigma factor
9 Sobic.006G158100 tRNA-dihydrouridine synthase, putative, expressed K05543: tRNA-dihydrouridine synthase 2
10 Sobic.007G150100 HD domain containing protein, putative, expressed -
11 Sobic.009G215500 transcription initiation factor IIB, putative, expressed K15196: BRF1, transcription factor IIIB 90 kDa subunit
12 Sobic.005G100600 bZIP transcription factor domain containing protein, expressed -
13 Sobic.010G043800 uncharacterized protein ycf45, putative, expressed -
14 Sobic.010G171600 STE_MEKK_ste11_MAP3K.12 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K04733: interleukin-1 receptor-associated kinase 4
15 Sobic.006G038500 tRNA-dihydrouridine synthase, putative, expressed K05539: tRNA-dihydrouridine synthase A
16 Sobic.003G343500 NADH-ubiquinone oxidoreductase, mitochondrial precursor, putative, expressed K17871: NADH:ubiquinone reductase (non-electrogenic)
17 Sobic.001G512500 expressed protein -
18 Sobic.003G345500 ureidoglycolate hydrolase, putative, expressed -
19 Sobic.003G203300 stress regulated protein, putative, expressed -
20 Sobic.008G115900 mitochondrial carrier protein, putative, expressed -


Gene co-expression network
sample Sobic003G110800 Sobic003G110800 Sobic001G465700 Sobic001G465700 Sobic003G110800--Sobic001G465700 Sobic006G092000 Sobic006G092000 Sobic003G110800--Sobic006G092000 Sobic002G091600 Sobic002G091600 Sobic003G110800--Sobic002G091600 Sobic006G173600 Sobic006G173600 Sobic003G110800--Sobic006G173600 Sobic006G031800 Sobic006G031800 Sobic003G110800--Sobic006G031800 Sobic004G026500 Sobic004G026500 Sobic003G110800--Sobic004G026500 Sobic001G530900 Sobic001G530900 Sobic003G110800--Sobic001G530900 Sobic001G003200 Sobic001G003200 Sobic003G110800--Sobic001G003200 Sobic006G158100 Sobic006G158100 Sobic003G110800--Sobic006G158100 Sobic006G038500 Sobic006G038500 Sobic001G465700--Sobic006G038500 Sobic010G043800 Sobic010G043800 Sobic001G465700--Sobic010G043800 Sobic005G111550 Sobic005G111550 Sobic001G465700--Sobic005G111550 Sobic003G442700 Sobic003G442700 Sobic001G465700--Sobic003G442700 Sobic008G001900 Sobic008G001900 Sobic001G465700--Sobic008G001900 Sobic004G294700 Sobic004G294700 Sobic001G465700--Sobic004G294700 Sobic001G465700--Sobic001G530900 Sobic004G298900 Sobic004G298900 Sobic001G465700--Sobic004G298900 Sobic001G465700--Sobic006G031800 Sobic006G092000--Sobic003G110800 Sobic005G100600 Sobic005G100600 Sobic006G092000--Sobic005G100600 Sobic004G193700 Sobic004G193700 Sobic006G092000--Sobic004G193700 Sobic005G059800 Sobic005G059800 Sobic006G092000--Sobic005G059800 Sobic003G229300 Sobic003G229300 Sobic006G092000--Sobic003G229300 Sobic006G092000--Sobic006G173600 Sobic008G115900 Sobic008G115900 Sobic006G092000--Sobic008G115900 Sobic006G092000--Sobic002G091600 Sobic001G516901 Sobic001G516901 Sobic006G092000--Sobic001G516901 Sobic002G091600--Sobic004G193700 Sobic002G091600--Sobic003G110800 Sobic007G136200 Sobic007G136200 Sobic002G091600--Sobic007G136200 Sobic003G119600 Sobic003G119600 Sobic002G091600--Sobic003G119600 Sobic001G097100 Sobic001G097100 Sobic002G091600--Sobic001G097100 Sobic002G091600--Sobic001G530900 Sobic005G084500 Sobic005G084500 Sobic002G091600--Sobic005G084500 Sobic009G215500 Sobic009G215500 Sobic002G091600--Sobic009G215500 Sobic005G106600 Sobic005G106600 Sobic002G091600--Sobic005G106600 Sobic007G150100 Sobic007G150100 Sobic006G173600--Sobic007G150100 Sobic006G173600--Sobic003G110800 Sobic006G173600--Sobic008G115900 Sobic003G219200 Sobic003G219200 Sobic006G173600--Sobic003G219200 Sobic006G173600--Sobic006G158100 Sobic004G178100 Sobic004G178100 Sobic006G173600--Sobic004G178100 Sobic006G173600--Sobic007G136200 SobicK031800 SobicK031800 Sobic006G173600--SobicK031800 Sobic001G072700 Sobic001G072700 Sobic006G173600--Sobic001G072700 Sobic006G031800--Sobic009G215500 Sobic006G031800--Sobic001G465700 Sobic007G136800 Sobic007G136800 Sobic006G031800--Sobic007G136800 Sobic003G168100 Sobic003G168100 Sobic006G031800--Sobic003G168100 Sobic003G217700 Sobic003G217700 Sobic006G031800--Sobic003G217700 Sobic006G031800--Sobic003G110800 Sobic006G128300 Sobic006G128300 Sobic006G031800--Sobic006G128300 Sobic006G031800--Sobic006G038500 Sobic002G218500 Sobic002G218500 Sobic006G031800--Sobic002G218500 Sobic008G172300 Sobic008G172300 Sobic004G026500--Sobic008G172300 Sobic001G124100 Sobic001G124100 Sobic004G026500--Sobic001G124100 Sobic009G193500 Sobic009G193500 Sobic004G026500--Sobic009G193500 Sobic001G219700 Sobic001G219700 Sobic004G026500--Sobic001G219700 Sobic004G026500--Sobic001G072700 Sobic002G339300 Sobic002G339300 Sobic004G026500--Sobic002G339300 Sobic003G203300 Sobic003G203300 Sobic004G026500--Sobic003G203300 Sobic007G227700 Sobic007G227700 Sobic004G026500--Sobic007G227700 Sobic002G276100 Sobic002G276100 Sobic004G026500--Sobic002G276100 Sobic010G002700 Sobic010G002700 Sobic001G530900--Sobic010G002700 Sobic001G530900--Sobic009G215500 Sobic001G378100 Sobic001G378100 Sobic001G530900--Sobic001G378100 Sobic007G185700 Sobic007G185700 Sobic001G530900--Sobic007G185700 Sobic005G118400 Sobic005G118400 Sobic001G530900--Sobic005G118400 Sobic001G530900--Sobic005G084500 Sobic003G332700 Sobic003G332700 Sobic001G530900--Sobic003G332700 Sobic001G530900--Sobic001G465700 Sobic001G530900--Sobic003G217700 Sobic009G056700 Sobic009G056700 Sobic001G003200--Sobic009G056700 Sobic007G053800 Sobic007G053800 Sobic001G003200--Sobic007G053800 Sobic004G121400 Sobic004G121400 Sobic001G003200--Sobic004G121400 Sobic001G003200--Sobic007G150100 Sobic006G188000 Sobic006G188000 Sobic001G003200--Sobic006G188000 Sobic003G398800 Sobic003G398800 Sobic001G003200--Sobic003G398800 Sobic001G048400 Sobic001G048400 Sobic001G003200--Sobic001G048400 Sobic003G431700 Sobic003G431700 Sobic001G003200--Sobic003G431700 Sobic001G504400 Sobic001G504400 Sobic001G003200--Sobic001G504400 Sobic006G158100--Sobic007G136200 Sobic001G017300 Sobic001G017300 Sobic006G158100--Sobic001G017300 Sobic001G258200 Sobic001G258200 Sobic006G158100--Sobic001G258200 Sobic006G158100--Sobic001G504400 Sobic003G094100 Sobic003G094100 Sobic006G158100--Sobic003G094100 Sobic006G158100--Sobic010G043800 Sobic010G067100 Sobic010G067100 Sobic006G158100--Sobic010G067100 Sobic001G169900 Sobic001G169900 Sobic006G158100--Sobic001G169900 Sobic003G185900 Sobic003G185900 Sobic006G158100--Sobic003G185900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.