Hb_137133_010

Information

Type -
Description -
Location Contig137133: 19872-22327
Sequence    

Annotation

kegg
ID tcc:TCM_025511
description Disease resistance family protein / LRR family protein, putative
nr
ID KDP35941.1
description hypothetical protein JCGZ_09913 [Jatropha curcas]
swissprot
ID O22938
description Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 OS=Arabidopsis thaliana GN=PXC3 PE=2 SV=1
trembl
ID A0A067KI84
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09913 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_137133_010 0.0 - - hypothetical protein JCGZ_09913 [Jatropha curcas]
2 Hb_001357_070 0.1241265997 - - hypothetical protein CISIN_1g0004672mg, partial [Citrus sinensis]
3 Hb_110559_010 0.1263999867 - - PREDICTED: uncharacterized protein LOC105800880, partial [Gossypium raimondii]
4 Hb_062562_010 0.1379426353 - - PREDICTED: uncharacterized protein LOC104219776 [Nicotiana sylvestris]
5 Hb_000521_010 0.1438754587 - - PREDICTED: protein UPSTREAM OF FLC [Jatropha curcas]
6 Hb_144451_010 0.1471433448 - - hypothetical protein VITISV_001808 [Vitis vinifera]
7 Hb_000510_020 0.1475238181 - - PREDICTED: uncharacterized protein LOC103415345 [Malus domestica]
8 Hb_002893_160 0.1512082709 - - peptidase, putative [Ricinus communis]
9 Hb_010896_020 0.1512692748 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
10 Hb_001243_010 0.2212862595 - - PREDICTED: dirigent protein 4-like [Populus euphratica]
11 Hb_011640_030 0.2481366826 - - 60S ribosomal protein L34A [Hevea brasiliensis]
12 Hb_001534_010 0.2805089134 - - Alpha-expansin 3 precursor [Theobroma cacao]
13 Hb_015322_040 0.2810697447 - - PREDICTED: uncharacterized protein LOC104105697 [Nicotiana tomentosiformis]
14 Hb_000098_320 0.2856131116 - - -
15 Hb_007904_140 0.2985591116 - - -
16 Hb_000240_060 0.3114603574 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
17 Hb_042778_010 0.3145192827 - - -
18 Hb_000130_030 0.3181127564 - - PREDICTED: small ubiquitin-related modifier 2-A-like [Eucalyptus grandis]
19 Hb_005438_010 0.3286196009 - - PREDICTED: uncharacterized protein LOC104902779 [Beta vulgaris subsp. vulgaris]
20 Hb_003144_050 0.330980972 - - PREDICTED: WAT1-related protein At5g64700 [Jatropha curcas]

Gene co-expression network

sample Hb_137133_010 Hb_137133_010 Hb_001357_070 Hb_001357_070 Hb_137133_010--Hb_001357_070 Hb_110559_010 Hb_110559_010 Hb_137133_010--Hb_110559_010 Hb_062562_010 Hb_062562_010 Hb_137133_010--Hb_062562_010 Hb_000521_010 Hb_000521_010 Hb_137133_010--Hb_000521_010 Hb_144451_010 Hb_144451_010 Hb_137133_010--Hb_144451_010 Hb_000510_020 Hb_000510_020 Hb_137133_010--Hb_000510_020 Hb_001357_070--Hb_110559_010 Hb_001357_070--Hb_062562_010 Hb_001357_070--Hb_000521_010 Hb_001357_070--Hb_144451_010 Hb_001357_070--Hb_000510_020 Hb_002893_160 Hb_002893_160 Hb_001357_070--Hb_002893_160 Hb_110559_010--Hb_062562_010 Hb_110559_010--Hb_000521_010 Hb_110559_010--Hb_144451_010 Hb_110559_010--Hb_000510_020 Hb_110559_010--Hb_002893_160 Hb_062562_010--Hb_000521_010 Hb_062562_010--Hb_144451_010 Hb_062562_010--Hb_000510_020 Hb_062562_010--Hb_002893_160 Hb_010896_020 Hb_010896_020 Hb_062562_010--Hb_010896_020 Hb_000521_010--Hb_144451_010 Hb_000521_010--Hb_000510_020 Hb_000521_010--Hb_002893_160 Hb_000521_010--Hb_010896_020 Hb_144451_010--Hb_000510_020 Hb_144451_010--Hb_002893_160 Hb_144451_010--Hb_010896_020 Hb_000510_020--Hb_002893_160 Hb_000510_020--Hb_010896_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0678194 0 0.0499771 0 0

CAGE analysis