Hb_129358_010

Information

Type -
Description -
Location Contig129358: 461-875
Sequence    

Annotation

kegg
ID -
description -
nr
ID XP_012074444.1
description PREDICTED: AT-hook motif nuclear-localized protein 11-like [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KW33
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10311 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_129358_010 0.0 - - PREDICTED: AT-hook motif nuclear-localized protein 11-like [Jatropha curcas]
2 Hb_007639_010 0.0266312071 - - hypothetical protein JCGZ_11284 [Jatropha curcas]
3 Hb_046609_010 0.0307627206 - - -
4 Hb_003362_010 0.0614040525 - - Actin-related protein 2/3 complex subunit 4 [Morus notabilis]
5 Hb_150498_010 0.076843558 - - hypothetical protein CICLE_v10033628mg, partial [Citrus clementina]
6 Hb_010272_020 0.1050877987 - - hypothetical protein VITISV_030841 [Vitis vinifera]
7 Hb_073171_060 0.1166543974 - - Histidine-containing phosphotransfer protein, putative [Ricinus communis]
8 Hb_000055_100 0.1293795951 - - polyprotein [Oryza australiensis]
9 Hb_000368_130 0.1301430033 - - conserved hypothetical protein [Ricinus communis]
10 Hb_088224_010 0.1348134252 - - PREDICTED: uncharacterized protein LOC105796032 [Gossypium raimondii]
11 Hb_000245_240 0.1360447783 - - -
12 Hb_000085_110 0.1369726166 - - hypothetical protein JCGZ_00957 [Jatropha curcas]
13 Hb_004888_050 0.1734030533 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
14 Hb_007586_020 0.1749888604 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
15 Hb_062858_010 0.1897845568 - - heat-shock protein, putative [Ricinus communis]
16 Hb_010172_060 0.1928769169 - - PREDICTED: uncharacterized protein LOC105634266 [Jatropha curcas]
17 Hb_157349_010 0.1987822161 - - PREDICTED: uncharacterized protein LOC102588546 [Solanum tuberosum]
18 Hb_001274_010 0.2075208969 - - -
19 Hb_000230_340 0.2184820621 - - Transcription elongation factor, putative [Ricinus communis]
20 Hb_000483_170 0.2312872165 transcription factor TF Family: NAC PREDICTED: protein FEZ [Jatropha curcas]

Gene co-expression network

sample Hb_129358_010 Hb_129358_010 Hb_007639_010 Hb_007639_010 Hb_129358_010--Hb_007639_010 Hb_046609_010 Hb_046609_010 Hb_129358_010--Hb_046609_010 Hb_003362_010 Hb_003362_010 Hb_129358_010--Hb_003362_010 Hb_150498_010 Hb_150498_010 Hb_129358_010--Hb_150498_010 Hb_010272_020 Hb_010272_020 Hb_129358_010--Hb_010272_020 Hb_073171_060 Hb_073171_060 Hb_129358_010--Hb_073171_060 Hb_007639_010--Hb_003362_010 Hb_007639_010--Hb_150498_010 Hb_007639_010--Hb_046609_010 Hb_007639_010--Hb_010272_020 Hb_007639_010--Hb_073171_060 Hb_046609_010--Hb_003362_010 Hb_046609_010--Hb_150498_010 Hb_046609_010--Hb_010272_020 Hb_046609_010--Hb_073171_060 Hb_003362_010--Hb_150498_010 Hb_003362_010--Hb_010272_020 Hb_003362_010--Hb_073171_060 Hb_000055_100 Hb_000055_100 Hb_003362_010--Hb_000055_100 Hb_150498_010--Hb_010272_020 Hb_150498_010--Hb_073171_060 Hb_150498_010--Hb_000055_100 Hb_000368_130 Hb_000368_130 Hb_150498_010--Hb_000368_130 Hb_010272_020--Hb_073171_060 Hb_010272_020--Hb_000055_100 Hb_010272_020--Hb_000368_130 Hb_088224_010 Hb_088224_010 Hb_010272_020--Hb_088224_010 Hb_000245_240 Hb_000245_240 Hb_010272_020--Hb_000245_240 Hb_073171_060--Hb_000055_100 Hb_073171_060--Hb_000368_130 Hb_073171_060--Hb_088224_010 Hb_073171_060--Hb_000245_240 Hb_000085_110 Hb_000085_110 Hb_073171_060--Hb_000085_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 1.96605
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.383518 0

CAGE analysis