Hb_007639_010

Information

Type -
Description -
Location Contig7639: 26688-28021
Sequence    

Annotation

kegg
ID bvg:104900936
description uncharacterized LOC104900936
nr
ID KDP34728.1
description hypothetical protein JCGZ_11284 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KID4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11284 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007639_010 0.0 - - hypothetical protein JCGZ_11284 [Jatropha curcas]
2 Hb_129358_010 0.0266312071 - - PREDICTED: AT-hook motif nuclear-localized protein 11-like [Jatropha curcas]
3 Hb_003362_010 0.0348173134 - - Actin-related protein 2/3 complex subunit 4 [Morus notabilis]
4 Hb_150498_010 0.0502905304 - - hypothetical protein CICLE_v10033628mg, partial [Citrus clementina]
5 Hb_046609_010 0.0573502699 - - -
6 Hb_010272_020 0.0786156151 - - hypothetical protein VITISV_030841 [Vitis vinifera]
7 Hb_073171_060 0.0902217725 - - Histidine-containing phosphotransfer protein, putative [Ricinus communis]
8 Hb_000055_100 0.102994416 - - polyprotein [Oryza australiensis]
9 Hb_000368_130 0.1037607953 - - conserved hypothetical protein [Ricinus communis]
10 Hb_088224_010 0.1084496916 - - PREDICTED: uncharacterized protein LOC105796032 [Gossypium raimondii]
11 Hb_000245_240 0.1096859996 - - -
12 Hb_000085_110 0.1106175944 - - hypothetical protein JCGZ_00957 [Jatropha curcas]
13 Hb_004888_050 0.1472100476 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
14 Hb_007586_020 0.1488035072 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
15 Hb_157349_010 0.1727170694 - - PREDICTED: uncharacterized protein LOC102588546 [Solanum tuberosum]
16 Hb_062858_010 0.1743733358 - - heat-shock protein, putative [Ricinus communis]
17 Hb_001274_010 0.1815022931 - - -
18 Hb_000483_170 0.2054011233 transcription factor TF Family: NAC PREDICTED: protein FEZ [Jatropha curcas]
19 Hb_010172_060 0.2123232945 - - PREDICTED: uncharacterized protein LOC105634266 [Jatropha curcas]
20 Hb_000589_430 0.217574824 - - hypothetical protein JCGZ_01402 [Jatropha curcas]

Gene co-expression network

sample Hb_007639_010 Hb_007639_010 Hb_129358_010 Hb_129358_010 Hb_007639_010--Hb_129358_010 Hb_003362_010 Hb_003362_010 Hb_007639_010--Hb_003362_010 Hb_150498_010 Hb_150498_010 Hb_007639_010--Hb_150498_010 Hb_046609_010 Hb_046609_010 Hb_007639_010--Hb_046609_010 Hb_010272_020 Hb_010272_020 Hb_007639_010--Hb_010272_020 Hb_073171_060 Hb_073171_060 Hb_007639_010--Hb_073171_060 Hb_129358_010--Hb_046609_010 Hb_129358_010--Hb_003362_010 Hb_129358_010--Hb_150498_010 Hb_129358_010--Hb_010272_020 Hb_129358_010--Hb_073171_060 Hb_003362_010--Hb_150498_010 Hb_003362_010--Hb_010272_020 Hb_003362_010--Hb_073171_060 Hb_000055_100 Hb_000055_100 Hb_003362_010--Hb_000055_100 Hb_150498_010--Hb_010272_020 Hb_150498_010--Hb_073171_060 Hb_150498_010--Hb_000055_100 Hb_000368_130 Hb_000368_130 Hb_150498_010--Hb_000368_130 Hb_046609_010--Hb_003362_010 Hb_046609_010--Hb_150498_010 Hb_046609_010--Hb_010272_020 Hb_046609_010--Hb_073171_060 Hb_010272_020--Hb_073171_060 Hb_010272_020--Hb_000055_100 Hb_010272_020--Hb_000368_130 Hb_088224_010 Hb_088224_010 Hb_010272_020--Hb_088224_010 Hb_000245_240 Hb_000245_240 Hb_010272_020--Hb_000245_240 Hb_073171_060--Hb_000055_100 Hb_073171_060--Hb_000368_130 Hb_073171_060--Hb_088224_010 Hb_073171_060--Hb_000245_240 Hb_000085_110 Hb_000085_110 Hb_073171_060--Hb_000085_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0.0536064
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0123348 0

CAGE analysis