Hb_011861_020

Information

Type desease resistance
Description Gene Name: NB-ARC
Location Contig11861: 13314-14663
Sequence    

Annotation

kegg
ID cic:CICLE_v10027525mg
description hypothetical protein
nr
ID KDP37040.1
description hypothetical protein JCGZ_06096 [Jatropha curcas]
swissprot
ID O64973
description Disease resistance protein RPS5 OS=Arabidopsis thaliana GN=RPS5 PE=1 SV=2
trembl
ID A0A067KXN5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06096 PE=4 SV=1
Gene Ontology
ID GO:0032550
description probable disease resistance protein at5g63020

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011861_020 0.0 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_06096 [Jatropha curcas]
2 Hb_000471_010 0.0603180479 - - ATP binding protein, putative [Ricinus communis]
3 Hb_150730_010 0.0610293052 - - PREDICTED: cytochrome P450 81E8-like [Jatropha curcas]
4 Hb_000005_350 0.0644437963 - - PREDICTED: uncharacterized protein LOC105634263 [Jatropha curcas]
5 Hb_116469_010 0.0662620923 - - PREDICTED: uncharacterized protein LOC105647834 [Jatropha curcas]
6 Hb_000057_180 0.0701587696 - - hypothetical protein POPTR_0001s18200g [Populus trichocarpa]
7 Hb_000684_490 0.0723027506 transcription factor TF Family: WRKY PREDICTED: WRKY transcription factor 44 [Jatropha curcas]
8 Hb_028927_010 0.0871150637 - - leucine-rich repeat protein, putative [Ricinus communis]
9 Hb_004586_110 0.0892297382 - - Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis]
10 Hb_000589_100 0.0897130537 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
11 Hb_010334_040 0.1043631458 - - PREDICTED: uncharacterized protein LOC105108579 [Populus euphratica]
12 Hb_000723_240 0.10458429 - - phenylalanine ammonia-lyase 2 [Manihot esculenta]
13 Hb_000834_210 0.1073581861 - - unnamed protein product [Vitis vinifera]
14 Hb_002003_030 0.1095762661 - - PREDICTED: UDP-glycosyltransferase 74F1-like [Jatropha curcas]
15 Hb_001660_040 0.1103307162 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Jatropha curcas]
16 Hb_009778_050 0.1167308319 - - hypothetical protein JCGZ_08917 [Jatropha curcas]
17 Hb_007313_010 0.1173258483 - - hypothetical protein JCGZ_23398 [Jatropha curcas]
18 Hb_003160_050 0.1300115943 - - chloroplast-targeted copper chaperone, putative [Ricinus communis]
19 Hb_001691_060 0.1311171416 - - lipoxygenase, putative [Ricinus communis]
20 Hb_000556_180 0.1328237321 - - hypothetical protein POPTR_0014s06690g [Populus trichocarpa]

Gene co-expression network

sample Hb_011861_020 Hb_011861_020 Hb_000471_010 Hb_000471_010 Hb_011861_020--Hb_000471_010 Hb_150730_010 Hb_150730_010 Hb_011861_020--Hb_150730_010 Hb_000005_350 Hb_000005_350 Hb_011861_020--Hb_000005_350 Hb_116469_010 Hb_116469_010 Hb_011861_020--Hb_116469_010 Hb_000057_180 Hb_000057_180 Hb_011861_020--Hb_000057_180 Hb_000684_490 Hb_000684_490 Hb_011861_020--Hb_000684_490 Hb_000471_010--Hb_000684_490 Hb_004586_110 Hb_004586_110 Hb_000471_010--Hb_004586_110 Hb_000471_010--Hb_150730_010 Hb_000471_010--Hb_116469_010 Hb_000471_010--Hb_000005_350 Hb_150730_010--Hb_000057_180 Hb_002003_030 Hb_002003_030 Hb_150730_010--Hb_002003_030 Hb_009778_050 Hb_009778_050 Hb_150730_010--Hb_009778_050 Hb_150730_010--Hb_116469_010 Hb_010334_040 Hb_010334_040 Hb_000005_350--Hb_010334_040 Hb_000589_100 Hb_000589_100 Hb_000005_350--Hb_000589_100 Hb_000005_350--Hb_000684_490 Hb_000005_350--Hb_116469_010 Hb_001691_060 Hb_001691_060 Hb_000005_350--Hb_001691_060 Hb_116469_010--Hb_002003_030 Hb_028927_010 Hb_028927_010 Hb_116469_010--Hb_028927_010 Hb_116469_010--Hb_000057_180 Hb_000057_180--Hb_028927_010 Hb_000057_180--Hb_000471_010 Hb_000057_180--Hb_002003_030 Hb_000684_490--Hb_004586_110 Hb_000684_490--Hb_010334_040 Hb_000684_490--Hb_116469_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.421416 0.823164 0.57417 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 2.53064 0.289047

CAGE analysis