Hb_116469_010

Information

Type -
Description -
Location Contig116469: 934-1580
Sequence    

Annotation

kegg
ID egr:104430935
description sugar transporter ERD6-like 3
nr
ID XP_012089451.1
description PREDICTED: uncharacterized protein LOC105647834 [Jatropha curcas]
swissprot
ID Q9LTP6
description Putative sugar transporter ERD6-like 13 OS=Arabidopsis thaliana GN=At3g20460 PE=3 SV=2
trembl
ID A0A067JVK6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23397 PE=3 SV=1
Gene Ontology
ID GO:0016021
description sugar transporter erd6-like 5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_116469_010 0.0 - - PREDICTED: uncharacterized protein LOC105647834 [Jatropha curcas]
2 Hb_011861_020 0.0662620923 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_06096 [Jatropha curcas]
3 Hb_002003_030 0.0726719284 - - PREDICTED: UDP-glycosyltransferase 74F1-like [Jatropha curcas]
4 Hb_028927_010 0.0772099401 - - leucine-rich repeat protein, putative [Ricinus communis]
5 Hb_150730_010 0.0792743202 - - PREDICTED: cytochrome P450 81E8-like [Jatropha curcas]
6 Hb_000057_180 0.0814798429 - - hypothetical protein POPTR_0001s18200g [Populus trichocarpa]
7 Hb_000005_350 0.0854827846 - - PREDICTED: uncharacterized protein LOC105634263 [Jatropha curcas]
8 Hb_000471_010 0.0877704929 - - ATP binding protein, putative [Ricinus communis]
9 Hb_000684_490 0.0965735578 transcription factor TF Family: WRKY PREDICTED: WRKY transcription factor 44 [Jatropha curcas]
10 Hb_000589_100 0.1058751044 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
11 Hb_004586_110 0.1109363035 - - Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis]
12 Hb_009778_050 0.1154898488 - - hypothetical protein JCGZ_08917 [Jatropha curcas]
13 Hb_001691_060 0.1159398948 - - lipoxygenase, putative [Ricinus communis]
14 Hb_000029_420 0.1298326318 - - PREDICTED: putative lipid-transfer protein DIR1 [Jatropha curcas]
15 Hb_006573_260 0.130803029 - - -
16 Hb_010334_040 0.134509083 - - PREDICTED: uncharacterized protein LOC105108579 [Populus euphratica]
17 Hb_111985_160 0.1351801543 - - hypothetical protein B456_010G008900 [Gossypium raimondii]
18 Hb_001377_480 0.1385892063 transcription factor TF Family: MYB Myb domain protein 7, putative [Theobroma cacao]
19 Hb_001775_050 0.1398713463 - - ribosome-inactivating protein cucurmosin-like [Jatropha curcas]
20 Hb_001660_040 0.1402991796 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Jatropha curcas]

Gene co-expression network

sample Hb_116469_010 Hb_116469_010 Hb_011861_020 Hb_011861_020 Hb_116469_010--Hb_011861_020 Hb_002003_030 Hb_002003_030 Hb_116469_010--Hb_002003_030 Hb_028927_010 Hb_028927_010 Hb_116469_010--Hb_028927_010 Hb_150730_010 Hb_150730_010 Hb_116469_010--Hb_150730_010 Hb_000057_180 Hb_000057_180 Hb_116469_010--Hb_000057_180 Hb_000005_350 Hb_000005_350 Hb_116469_010--Hb_000005_350 Hb_000471_010 Hb_000471_010 Hb_011861_020--Hb_000471_010 Hb_011861_020--Hb_150730_010 Hb_011861_020--Hb_000005_350 Hb_011861_020--Hb_000057_180 Hb_000684_490 Hb_000684_490 Hb_011861_020--Hb_000684_490 Hb_002003_030--Hb_150730_010 Hb_009778_050 Hb_009778_050 Hb_002003_030--Hb_009778_050 Hb_002003_030--Hb_000057_180 Hb_002003_030--Hb_011861_020 Hb_002003_030--Hb_000471_010 Hb_028927_010--Hb_000057_180 Hb_028927_010--Hb_011861_020 Hb_000589_100 Hb_000589_100 Hb_028927_010--Hb_000589_100 Hb_000723_240 Hb_000723_240 Hb_028927_010--Hb_000723_240 Hb_006573_260 Hb_006573_260 Hb_028927_010--Hb_006573_260 Hb_150730_010--Hb_000057_180 Hb_150730_010--Hb_009778_050 Hb_150730_010--Hb_000471_010 Hb_000057_180--Hb_000471_010 Hb_010334_040 Hb_010334_040 Hb_000005_350--Hb_010334_040 Hb_000005_350--Hb_000589_100 Hb_000005_350--Hb_000684_490 Hb_001691_060 Hb_001691_060 Hb_000005_350--Hb_001691_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 3.59058 10.1202 4.47079 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 27.5197 2.1746

CAGE analysis