Hb_010477_020

Information

Type -
Description -
Location Contig10477: 15226-16017
Sequence    

Annotation

kegg
ID pop:POPTR_0007s02210g
description hypothetical protein
nr
ID KDP42826.1
description hypothetical protein JCGZ_23768 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L2Z5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23768 PE=3 SV=1
Gene Ontology
ID GO:0005488
description probable receptor-like protein kinase at1g67000

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010477_020 0.0 - - hypothetical protein JCGZ_23768 [Jatropha curcas]
2 Hb_002548_030 0.0882174328 - - PREDICTED: uncharacterized protein LOC103343650 [Prunus mume]
3 Hb_000359_230 0.0883347944 - - PREDICTED: putative DNA-binding protein ESCAROLA [Prunus mume]
4 Hb_034581_010 0.0886726839 - - PREDICTED: acidic mammalian chitinase-like [Jatropha curcas]
5 Hb_110356_010 0.088943913 - - hypothetical protein JCGZ_21614 [Jatropha curcas]
6 Hb_002252_030 0.0917265171 - - hypothetical protein JCGZ_06771 [Jatropha curcas]
7 Hb_099188_010 0.0986789146 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
8 Hb_001677_140 0.1036091801 - - PREDICTED: uncharacterized protein LOC102622520 isoform X1 [Citrus sinensis]
9 Hb_128851_020 0.1101430269 - - ankyrin repeat-containing protein, putative [Ricinus communis]
10 Hb_157957_010 0.1170867616 - - hypothetical protein JCGZ_10722 [Jatropha curcas]
11 Hb_036754_040 0.1179900658 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
12 Hb_012264_010 0.120188881 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
13 Hb_003207_230 0.1208244749 transcription factor TF Family: ERF PREDICTED: dehydration-responsive element-binding protein 1B-like [Jatropha curcas]
14 Hb_010136_020 0.1223548576 - - stress-induced receptor-like kinase [Medicago truncatula]
15 Hb_124953_010 0.1229951352 - - hypothetical protein RCOM_1314600 [Ricinus communis]
16 Hb_047955_010 0.124310502 transcription factor TF Family: MYB PREDICTED: myb-related protein Myb4-like [Jatropha curcas]
17 Hb_002006_110 0.1244873596 transcription factor TF Family: LFY LEAFY-like protein [Pistacia chinensis]
18 Hb_008637_020 0.1282483622 - - conserved hypothetical protein [Ricinus communis]
19 Hb_001511_200 0.1308871565 - - Embryonic abundant protein, putative [Ricinus communis]
20 Hb_000032_150 0.1350895597 transcription factor TF Family: WRKY hypothetical protein RCOM_1691430 [Ricinus communis]

Gene co-expression network

sample Hb_010477_020 Hb_010477_020 Hb_002548_030 Hb_002548_030 Hb_010477_020--Hb_002548_030 Hb_000359_230 Hb_000359_230 Hb_010477_020--Hb_000359_230 Hb_034581_010 Hb_034581_010 Hb_010477_020--Hb_034581_010 Hb_110356_010 Hb_110356_010 Hb_010477_020--Hb_110356_010 Hb_002252_030 Hb_002252_030 Hb_010477_020--Hb_002252_030 Hb_099188_010 Hb_099188_010 Hb_010477_020--Hb_099188_010 Hb_002548_030--Hb_000359_230 Hb_002548_030--Hb_110356_010 Hb_002548_030--Hb_099188_010 Hb_002548_030--Hb_034581_010 Hb_001677_140 Hb_001677_140 Hb_002548_030--Hb_001677_140 Hb_128851_020 Hb_128851_020 Hb_002548_030--Hb_128851_020 Hb_000359_230--Hb_110356_010 Hb_000359_230--Hb_099188_010 Hb_000359_230--Hb_034581_010 Hb_000359_230--Hb_001677_140 Hb_000359_230--Hb_128851_020 Hb_034581_010--Hb_110356_010 Hb_034581_010--Hb_001677_140 Hb_036754_040 Hb_036754_040 Hb_034581_010--Hb_036754_040 Hb_010136_020 Hb_010136_020 Hb_034581_010--Hb_010136_020 Hb_110356_010--Hb_001677_140 Hb_110356_010--Hb_099188_010 Hb_110356_010--Hb_128851_020 Hb_047955_010 Hb_047955_010 Hb_002252_030--Hb_047955_010 Hb_157957_010 Hb_157957_010 Hb_002252_030--Hb_157957_010 Hb_002252_030--Hb_000359_230 Hb_002252_030--Hb_002548_030 Hb_002252_030--Hb_034581_010 Hb_099188_010--Hb_128851_020 Hb_099188_010--Hb_001677_140 Hb_099188_010--Hb_034581_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0718856 2.63526 1.24045 0.70379 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis