Hb_004669_010

Information

Type -
Description -
Location Contig4669: 24655-25200
Sequence    

Annotation

kegg
ID rcu:RCOM_1540300
description hypothetical protein
nr
ID KDP43381.1
description hypothetical protein JCGZ_26481 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L4J0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26481 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004669_010 0.0 - - hypothetical protein JCGZ_26481 [Jatropha curcas]
2 Hb_001205_260 0.0033549126 - - DWNN domain isoform 2 [Theobroma cacao]
3 Hb_028447_010 0.0049190144 - - hypothetical protein RCOM_1967580 [Ricinus communis]
4 Hb_004586_100 0.0054059036 - - PREDICTED: uncharacterized protein LOC105120428 isoform X2 [Populus euphratica]
5 Hb_001158_210 0.0099020765 - - conserved hypothetical protein [Ricinus communis]
6 Hb_003203_010 0.0099374677 - - PREDICTED: uncharacterized protein LOC105634374 [Jatropha curcas]
7 Hb_001098_060 0.0125445154 - - -
8 Hb_001140_120 0.0134045853 - - PREDICTED: uncharacterized protein LOC105648582 [Jatropha curcas]
9 Hb_000762_100 0.0137074313 - - PREDICTED: uncharacterized protein LOC102617255 [Citrus sinensis]
10 Hb_007292_040 0.0141371081 - - Plastid developmental protein DAG [Theobroma cacao]
11 Hb_000018_080 0.0162547944 - - hypothetical protein JCGZ_07748 [Jatropha curcas]
12 Hb_128935_010 0.0169572918 - - E3 ubiquitin-protein ligase UPL5 [Glycine soja]
13 Hb_003841_010 0.0172481904 - - -
14 Hb_002292_060 0.0182684501 - - PREDICTED: uncharacterized protein LOC101496717 [Cicer arietinum]
15 Hb_000853_320 0.0188931948 - - -
16 Hb_002471_030 0.0192635972 - - PREDICTED: cyclin-J18 [Jatropha curcas]
17 Hb_014223_030 0.019690628 - - PREDICTED: putative F-box/FBD/LRR-repeat protein At4g03220 [Jatropha curcas]
18 Hb_001660_110 0.019945384 - - amino acid transporter, putative [Ricinus communis]
19 Hb_006277_040 0.0201690577 - - PREDICTED: sodium-dependent phosphate transporter 1-like [Jatropha curcas]
20 Hb_088508_010 0.0204598081 - - cytochrome P450, putative [Ricinus communis]

Gene co-expression network

sample Hb_004669_010 Hb_004669_010 Hb_001205_260 Hb_001205_260 Hb_004669_010--Hb_001205_260 Hb_028447_010 Hb_028447_010 Hb_004669_010--Hb_028447_010 Hb_004586_100 Hb_004586_100 Hb_004669_010--Hb_004586_100 Hb_001158_210 Hb_001158_210 Hb_004669_010--Hb_001158_210 Hb_003203_010 Hb_003203_010 Hb_004669_010--Hb_003203_010 Hb_001098_060 Hb_001098_060 Hb_004669_010--Hb_001098_060 Hb_001205_260--Hb_028447_010 Hb_001205_260--Hb_004586_100 Hb_001205_260--Hb_003203_010 Hb_001205_260--Hb_001098_060 Hb_001140_120 Hb_001140_120 Hb_001205_260--Hb_001140_120 Hb_028447_010--Hb_004586_100 Hb_028447_010--Hb_003203_010 Hb_028447_010--Hb_001098_060 Hb_028447_010--Hb_001140_120 Hb_004586_100--Hb_003203_010 Hb_004586_100--Hb_001098_060 Hb_004586_100--Hb_001140_120 Hb_128935_010 Hb_128935_010 Hb_001158_210--Hb_128935_010 Hb_003841_010 Hb_003841_010 Hb_001158_210--Hb_003841_010 Hb_002292_060 Hb_002292_060 Hb_001158_210--Hb_002292_060 Hb_000853_320 Hb_000853_320 Hb_001158_210--Hb_000853_320 Hb_001660_110 Hb_001660_110 Hb_001158_210--Hb_001660_110 Hb_003203_010--Hb_001098_060 Hb_003203_010--Hb_001140_120 Hb_000762_100 Hb_000762_100 Hb_003203_010--Hb_000762_100 Hb_007292_040 Hb_007292_040 Hb_003203_010--Hb_007292_040 Hb_001098_060--Hb_001140_120 Hb_001098_060--Hb_000762_100 Hb_001098_060--Hb_007292_040 Hb_000018_080 Hb_000018_080 Hb_001098_060--Hb_000018_080 Hb_002471_030 Hb_002471_030 Hb_001098_060--Hb_002471_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0790434 0.163711 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis