Hb_001740_010

Information

Type -
Description -
Location Contig1740: 24573-26086
Sequence    

Annotation

kegg
ID rcu:RCOM_0785370
description cytochrome P450, putative (EC:1.14.13.68)
nr
ID KDP29690.1
description hypothetical protein JCGZ_18625 [Jatropha curcas]
swissprot
ID O65786
description Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CYP71B4 PE=2 SV=2
trembl
ID A0A067KBR5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18625 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001740_010 0.0 - - hypothetical protein JCGZ_18625 [Jatropha curcas]
2 Hb_001621_080 0.000503617 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 33 [Jatropha curcas]
3 Hb_013405_120 0.0008570414 - - -
4 Hb_001568_100 0.001190173 - - hypothetical protein Csa_2G404850 [Cucumis sativus]
5 Hb_003894_130 0.0012585579 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
6 Hb_002400_120 0.0018850126 - - hypothetical protein B456_002G103400 [Gossypium raimondii]
7 Hb_001611_030 0.0021842547 - - -
8 Hb_006124_020 0.0024741517 - - hypothetical protein JCGZ_13738 [Jatropha curcas]
9 Hb_027556_030 0.0027199475 - - PREDICTED: pleiotropic drug resistance protein 1-like, partial [Gossypium raimondii]
10 Hb_002985_020 0.0029601115 - - PREDICTED: uncharacterized protein LOC105634374 [Jatropha curcas]
11 Hb_000036_020 0.0029898158 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
12 Hb_007313_020 0.0036019945 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
13 Hb_051719_020 0.0036865347 - - PREDICTED: toll/interleukin-1 receptor-like protein [Jatropha curcas]
14 Hb_004332_060 0.0038362312 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
15 Hb_000391_030 0.0043598956 - - polyprotein [Citrus endogenous pararetrovirus]
16 Hb_000050_230 0.0043931952 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
17 Hb_002285_010 0.0044033484 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
18 Hb_140406_010 0.0045829359 - - hypothetical protein JCGZ_19461 [Jatropha curcas]
19 Hb_012120_010 0.0048076091 - - -
20 Hb_001476_010 0.0052981296 - - hypothetical protein JCGZ_15669 [Jatropha curcas]

Gene co-expression network

sample Hb_001740_010 Hb_001740_010 Hb_001621_080 Hb_001621_080 Hb_001740_010--Hb_001621_080 Hb_013405_120 Hb_013405_120 Hb_001740_010--Hb_013405_120 Hb_001568_100 Hb_001568_100 Hb_001740_010--Hb_001568_100 Hb_003894_130 Hb_003894_130 Hb_001740_010--Hb_003894_130 Hb_002400_120 Hb_002400_120 Hb_001740_010--Hb_002400_120 Hb_001611_030 Hb_001611_030 Hb_001740_010--Hb_001611_030 Hb_001621_080--Hb_013405_120 Hb_001621_080--Hb_003894_130 Hb_001621_080--Hb_002400_120 Hb_001621_080--Hb_001611_030 Hb_001621_080--Hb_001568_100 Hb_013405_120--Hb_003894_130 Hb_013405_120--Hb_002400_120 Hb_013405_120--Hb_001611_030 Hb_027556_030 Hb_027556_030 Hb_013405_120--Hb_027556_030 Hb_006124_020 Hb_006124_020 Hb_001568_100--Hb_006124_020 Hb_002985_020 Hb_002985_020 Hb_001568_100--Hb_002985_020 Hb_000036_020 Hb_000036_020 Hb_001568_100--Hb_000036_020 Hb_001568_100--Hb_013405_120 Hb_003894_130--Hb_002400_120 Hb_003894_130--Hb_001611_030 Hb_003894_130--Hb_027556_030 Hb_002400_120--Hb_001611_030 Hb_002400_120--Hb_027556_030 Hb_051719_020 Hb_051719_020 Hb_002400_120--Hb_051719_020 Hb_001611_030--Hb_027556_030 Hb_001611_030--Hb_051719_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0293899 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0257727 0

CAGE analysis