Gene annotation
Transcriptome id Sobic.010G243400.1,Sobic.010G243400.2
Synonym Sb10g028320
Functional annotation expressed protein
UniProt A0A194YLA0
Pfam PF07800
Panther DB PTHR31197 PTHR31197:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G31410 : Protein of unknown function (DUF1644)
RAP-DB (Rice) LOC_Os06g47860.2 : expressed protein
MaizeGDB (Corn) Zm00025a018269 , Zm00025a041823
Brachypodium PNT75485 , KQK17269
Barley HORVU7Hr1G099070.2 , HORVU7Hr1G099070.3 , HORVU7Hr1G099070.6 , HORVU7Hr1G099070.7 , HORVU7Hr1G099070.4 , HORVU7Hr1G099070.5
Wheat TraesCS7B02G332200 , TraesCS7A02G432000 , TraesCS7D02G423700
Populus PNT34081 , PNT34080 , PNT34078 , PNT34079 , PNT34074 , PNT34075 , PNT34076 , PNT34077 , PNS91988 , PNS91985 , PNS91986 , PNS91987


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cDNA sequences
Sobic.010G243400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G165000 LSD1 zinc finger domain containing protein, expressed -
2 Sobic.007G056100 expressed protein K15077: elongin-A
3 Sobic.010G261600 ubiquitin interaction motif family protein, expressed -
4 Sobic.003G243700 vacuolar protein-sorting-associated protein 25, putative, expressed K12189: VPS25, ESCRT-II complex subunit VPS25
5 Sobic.009G041700 Fibronectin type III domain containing protein, expressed -
6 Sobic.009G224000 OsQSOXL1 quiescin-sulfhydryl oxidase-like OsQSOXL1, expressed K10758: thiol oxidase
7 Sobic.004G003401 - -
8 Sobic.008G173400 initiation factor 2 subunit family domain containing protein, expressed K03680: translation initiation factor eIF-2B subunit delta
9 Sobic.001G421400 expressed protein -
10 Sobic.005G177700 transmembrane protein 49, putative, expressed -
11 Sobic.002G303600 -(PubMedID : 29147737)@RIN3, putative, expressed K10636: AMFR, autocrine motility factor receptor
12 Sobic.004G028100 expressed protein -
13 Sobic.001G161900 zinc finger, C3HC4 type domain containing protein, expressed K16277: E3 ubiquitin-protein ligase DRIP
14 Sobic.004G094300 protein kinase domain containing protein, expressed K04424: ZAK, sterile alpha motif and leucine zipper containing kinase AZK
15 Sobic.001G313500 tobamovirus multiplication protein, putative, expressed -
16 Sobic.001G287800 GTPase-activating protein, putative, expressed K12493: ADP-ribosylation factor GTPase-activating protein 2/3
17 Sobic.003G398400 expressed protein -
18 Sobic.003G270600 adaptor complexes medium subunit family domain containing protein, expressed K12393: AP-1 complex subunit mu
19 Sobic.009G228700 expressed protein -
20 Sobic.002G355800 calcium-binding protein, putative, expressed K08272: CAB39, calcium binding protein 39


Gene co-expression network
sample Sobic010G243400 Sobic010G243400 Sobic008G165000 Sobic008G165000 Sobic010G243400--Sobic008G165000 Sobic007G056100 Sobic007G056100 Sobic010G243400--Sobic007G056100 Sobic010G261600 Sobic010G261600 Sobic010G243400--Sobic010G261600 Sobic003G243700 Sobic003G243700 Sobic010G243400--Sobic003G243700 Sobic009G041700 Sobic009G041700 Sobic010G243400--Sobic009G041700 Sobic009G224000 Sobic009G224000 Sobic010G243400--Sobic009G224000 Sobic004G003401 Sobic004G003401 Sobic010G243400--Sobic004G003401 Sobic008G173400 Sobic008G173400 Sobic010G243400--Sobic008G173400 Sobic001G421400 Sobic001G421400 Sobic010G243400--Sobic001G421400 Sobic008G165000--Sobic010G243400 Sobic006G254600 Sobic006G254600 Sobic008G165000--Sobic006G254600 Sobic001G489700 Sobic001G489700 Sobic008G165000--Sobic001G489700 Sobic002G378200 Sobic002G378200 Sobic008G165000--Sobic002G378200 Sobic001G085500 Sobic001G085500 Sobic008G165000--Sobic001G085500 Sobic004G094300 Sobic004G094300 Sobic008G165000--Sobic004G094300 Sobic002G040700 Sobic002G040700 Sobic008G165000--Sobic002G040700 Sobic001G512400 Sobic001G512400 Sobic008G165000--Sobic001G512400 Sobic001G522900 Sobic001G522900 Sobic008G165000--Sobic001G522900 Sobic005G177700 Sobic005G177700 Sobic007G056100--Sobic005G177700 Sobic007G056100--Sobic010G243400 Sobic002G355800 Sobic002G355800 Sobic007G056100--Sobic002G355800 Sobic007G056100--Sobic009G224000 Sobic003G199500 Sobic003G199500 Sobic007G056100--Sobic003G199500 Sobic007G056100--Sobic001G421400 Sobic007G056100--Sobic010G261600 Sobic002G303600 Sobic002G303600 Sobic007G056100--Sobic002G303600 Sobic001G465400 Sobic001G465400 Sobic007G056100--Sobic001G465400 Sobic003G338500 Sobic003G338500 Sobic010G261600--Sobic003G338500 Sobic010G261600--Sobic002G303600 Sobic002G008800 Sobic002G008800 Sobic010G261600--Sobic002G008800 Sobic004G228800 Sobic004G228800 Sobic010G261600--Sobic004G228800 Sobic004G323700 Sobic004G323700 Sobic010G261600--Sobic004G323700 Sobic002G262900 Sobic002G262900 Sobic010G261600--Sobic002G262900 Sobic009G228700 Sobic009G228700 Sobic010G261600--Sobic009G228700 Sobic004G275700 Sobic004G275700 Sobic010G261600--Sobic004G275700 Sobic010G020400 Sobic010G020400 Sobic010G261600--Sobic010G020400 Sobic003G243700--Sobic010G243400 Sobic001G114000 Sobic001G114000 Sobic003G243700--Sobic001G114000 Sobic003G173600 Sobic003G173600 Sobic003G243700--Sobic003G173600 Sobic003G243700--Sobic002G262900 Sobic003G270600 Sobic003G270600 Sobic003G243700--Sobic003G270600 Sobic007G218000 Sobic007G218000 Sobic003G243700--Sobic007G218000 Sobic009G124700 Sobic009G124700 Sobic003G243700--Sobic009G124700 Sobic007G132100 Sobic007G132100 Sobic003G243700--Sobic007G132100 Sobic004G178200 Sobic004G178200 Sobic003G243700--Sobic004G178200 Sobic009G041700--Sobic001G114000 Sobic004G321100 Sobic004G321100 Sobic009G041700--Sobic004G321100 Sobic009G041700--Sobic005G177700 Sobic005G138300 Sobic005G138300 Sobic009G041700--Sobic005G138300 Sobic009G041700--Sobic007G218000 Sobic009G041700--Sobic010G243400 Sobic006G167600 Sobic006G167600 Sobic009G041700--Sobic006G167600 Sobic004G067700 Sobic004G067700 Sobic009G041700--Sobic004G067700 Sobic009G041700--Sobic009G124700 Sobic009G224000--Sobic003G338500 Sobic009G224000--Sobic010G243400 Sobic009G224000--Sobic007G056100 Sobic002G361300 Sobic002G361300 Sobic009G224000--Sobic002G361300 Sobic004G130400 Sobic004G130400 Sobic009G224000--Sobic004G130400 Sobic009G224000--Sobic010G261600 Sobic003G394200 Sobic003G394200 Sobic009G224000--Sobic003G394200 Sobic009G224000--Sobic003G270600 Sobic009G224000--Sobic008G173400 Sobic004G003401--Sobic009G228700 Sobic004G003401--Sobic002G303600 Sobic001G091300 Sobic001G091300 Sobic004G003401--Sobic001G091300 Sobic004G003401--Sobic010G243400 Sobic006G180000 Sobic006G180000 Sobic004G003401--Sobic006G180000 Sobic003G312200 Sobic003G312200 Sobic004G003401--Sobic003G312200 Sobic004G003401--Sobic001G114000 Sobic004G003401--Sobic009G041700 Sobic006G200600 Sobic006G200600 Sobic004G003401--Sobic006G200600 Sobic008G173400--Sobic010G243400 Sobic008G173400--Sobic004G067700 Sobic008G173400--Sobic001G114000 Sobic001G106100 Sobic001G106100 Sobic008G173400--Sobic001G106100 Sobic002G197100 Sobic002G197100 Sobic008G173400--Sobic002G197100 Sobic008G173400--Sobic004G003401 Sobic003G398400 Sobic003G398400 Sobic008G173400--Sobic003G398400 Sobic008G173400--Sobic009G041700 Sobic008G173400--Sobic008G165000 Sobic001G313500 Sobic001G313500 Sobic001G421400--Sobic001G313500 Sobic001G421400--Sobic010G243400 Sobic003G382900 Sobic003G382900 Sobic001G421400--Sobic003G382900 Sobic001G161900 Sobic001G161900 Sobic001G421400--Sobic001G161900 Sobic003G200600 Sobic003G200600 Sobic001G421400--Sobic003G200600 Sobic001G421400--Sobic007G056100 Sobic001G421400--Sobic001G512400 Sobic003G148900 Sobic003G148900 Sobic001G421400--Sobic003G148900 Sobic001G421400--Sobic010G261600
Octagon: transcription factors


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